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Previous release (v1)
2024-04-29 00:09:00, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001320266 569 bp mRNA linear PRI 29-DEC-2022
DEFINITION Homo sapiens ATP synthase peripheral stalk subunit F6 (ATP5PF),
transcript variant 6, mRNA; nuclear gene for mitochondrial product.
ACCESSION NM_001320266 XM_005260992
VERSION NM_001320266.2
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 569)
AUTHORS Luck K, Kim DK, Lambourne L, Spirohn K, Begg BE, Bian W, Brignall
R, Cafarelli T, Campos-Laborie FJ, Charloteaux B, Choi D, Cote AG,
Daley M, Deimling S, Desbuleux A, Dricot A, Gebbia M, Hardy MF,
Kishore N, Knapp JJ, Kovacs IA, Lemmens I, Mee MW, Mellor JC,
Pollis C, Pons C, Richardson AD, Schlabach S, Teeking B, Yadav A,
Babor M, Balcha D, Basha O, Bowman-Colin C, Chin SF, Choi SG,
Colabella C, Coppin G, D'Amata C, De Ridder D, De Rouck S,
Duran-Frigola M, Ennajdaoui H, Goebels F, Goehring L, Gopal A,
Haddad G, Hatchi E, Helmy M, Jacob Y, Kassa Y, Landini S, Li R, van
Lieshout N, MacWilliams A, Markey D, Paulson JN, Rangarajan S,
Rasla J, Rayhan A, Rolland T, San-Miguel A, Shen Y, Sheykhkarimli
D, Sheynkman GM, Simonovsky E, Tasan M, Tejeda A, Tropepe V,
Twizere JC, Wang Y, Weatheritt RJ, Weile J, Xia Y, Yang X,
Yeger-Lotem E, Zhong Q, Aloy P, Bader GD, De Las Rivas J, Gaudet S,
Hao T, Rak J, Tavernier J, Hill DE, Vidal M, Roth FP and Calderwood
MA.
TITLE A reference map of the human binary protein interactome
JOURNAL Nature 580 (7803), 402-408 (2020)
PUBMED 32296183
REFERENCE 2 (bases 1 to 569)
AUTHORS Fasci D, van Ingen H, Scheltema RA and Heck AJR.
TITLE Histone Interaction Landscapes Visualized by Crosslinking Mass
Spectrometry in Intact Cell Nuclei
JOURNAL Mol Cell Proteomics 17 (10), 2018-2033 (2018)
PUBMED 30021884
REFERENCE 3 (bases 1 to 569)
AUTHORS Bai B, Xie B, Pan Z, Shan L, Zhao J and Zhu H.
TITLE Identification of candidate genes and long non-coding RNAs
associated with the effect of ATP5J in colorectal cancer
JOURNAL Int J Oncol 52 (4), 1129-1138 (2018)
PUBMED 29484395
REMARK GeneRIF: AKT2 and XIST expression was identified as a potential
biomarker participating in the effect of ATP5J in colorectal cancer
REFERENCE 4 (bases 1 to 569)
AUTHORS Floyd BJ, Wilkerson EM, Veling MT, Minogue CE, Xia C, Beebe ET,
Wrobel RL, Cho H, Kremer LS, Alston CL, Gromek KA, Dolan BK,
Ulbrich A, Stefely JA, Bohl SL, Werner KM, Jochem A, Westphall MS,
Rensvold JW, Taylor RW, Prokisch H, Kim JP, Coon JJ and Pagliarini
DJ.
TITLE Mitochondrial Protein Interaction Mapping Identifies Regulators of
Respiratory Chain Function
JOURNAL Mol Cell 63 (4), 621-632 (2016)
PUBMED 27499296
REFERENCE 5 (bases 1 to 569)
AUTHORS Kawai M, Osanai T, Tanaka M, Magota K, Tomita H and Okumura K.
TITLE Mitochondrial Inhibitory Factor Protein 1 Functions as an
Endogenous Inhibitor for Coupling Factor 6
JOURNAL J Cell Biochem 117 (7), 1680-1687 (2016)
PUBMED 26659871
REMARK GeneRIF: CF6-induced increase in apoptotic cells was blocked by
immature or mature IF1, being accompanied by protein kinase B (PKB)
phosphorylation. IF1 antagonizes the pro-apoptotic action of CF6 by
relief of intracellular acidification and resultant phosphorylation
of PKB.
REFERENCE 6 (bases 1 to 569)
AUTHORS Adams MD, Kerlavage AR, Fleischmann RD, Fuldner RA, Bult CJ, Lee
NH, Kirkness EF, Weinstock KG, Gocayne JD, White O et al.
TITLE Initial assessment of human gene diversity and expression patterns
based upon 83 million nucleotides of cDNA sequence
JOURNAL Nature 377 (6547 Suppl), 3-174 (1995)
PUBMED 7566098
REFERENCE 7 (bases 1 to 569)
AUTHORS Hochstrasser DF, Frutiger S, Paquet N, Bairoch A, Ravier F,
Pasquali C, Sanchez JC, Tissot JD, Bjellqvist B, Vargas R et al.
TITLE Human liver protein map: a reference database established by
microsequencing and gel comparison
JOURNAL Electrophoresis 13 (12), 992-1001 (1992)
PUBMED 1286669
REFERENCE 8 (bases 1 to 569)
AUTHORS Higuti T, Tsurumi C, Kawamura Y, Tsujita H, Osaka F, Yoshihara Y,
Tani I, Tanaka K and Ichihara A.
TITLE Molecular cloning of cDNA for the import precursor of human
coupling factor 6 of H(+)-ATP synthase in mitochondria
JOURNAL Biochem Biophys Res Commun 178 (2), 793-799 (1991)
PUBMED 1830479
REFERENCE 9 (bases 1 to 569)
AUTHORS Javed AA, Ogata K and Sanadi DR.
TITLE Human mitochondrial ATP synthase: cloning cDNA for the
nuclear-encoded precursor of coupling factor 6
JOURNAL Gene 97 (2), 307-310 (1991)
PUBMED 1825642
REFERENCE 10 (bases 1 to 569)
AUTHORS Boyer,P.D., Cross,R.L. and Momsen,W.
TITLE A new concept for energy coupling in oxidative phosphorylation
based on a molecular explanation of the oxygen exchange reactions
JOURNAL Proc Natl Acad Sci U S A 70 (10), 2837-2839 (1973)
PUBMED 4517936
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from BQ268216.1, HY146471.1,
AA364611.1 and AI085837.1.
On Aug 11, 2020 this sequence version replaced NM_001320266.1.
Summary: Mitochondrial ATP synthase catalyzes ATP synthesis,
utilizing an electrochemical gradient of protons across the inner
membrane during oxidative phosphorylation. It is composed of two
linked multi-subunit complexes: the soluble catalytic core, F1, and
the membrane-spanning component, Fo, which comprises the proton
channel. The F1 complex consists of 5 different subunits (alpha,
beta, gamma, delta, and epsilon) assembled in a ratio of 3 alpha, 3
beta, and a single representative of the other 3. The Fo complex
has nine subunits (a, b, c, d, e, f, g, F6 and 8). This gene
encodes the F6 subunit of the Fo complex. The F6 subunit is
required for F1 and Fo interactions. Alternatively spliced
transcript variants encoding different isoforms have been
identified for this gene. This gene has 1 or more pseudogenes.
[provided by RefSeq, Feb 2016].
Transcript Variant: This variant (6) differs in the 5' UTR,
compared to variant 1. Variants 1, 2, 3, 4, 6 and 7 encode the same
isoform (a).
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BP248938.1, SRR5189667.343503.1
[ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA1968832, SAMEA2148874
[ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
gene product(s) localized to mito. :: reported by MitoCarta
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-20 BQ268216.1 75-94
21-87 HY146471.1 2-68
88-88 AA364611.1 69-69
89-500 HY146471.1 70-481
501-569 AI085837.1 28-96 c
FEATURES Location/Qualifiers
source 1..569
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="21"
/map="21q21.3"
gene 1..569
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="ATP synthase peripheral stalk subunit F6"
/db_xref="GeneID:522"
/db_xref="HGNC:HGNC:847"
/db_xref="MIM:603152"
exon 1..52
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034965769"
variation 3..17
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="agcggaggtggtggc"
/replace="agcggaggtggtggcagcggaggtggtggc"
/db_xref="dbSNP:1341914643"
variation 4
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:746228556"
variation 5
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:558639036"
variation 6
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034965299"
variation 8
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:752886875"
variation 9..16
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="ggtggtgg"
/replace="ggtggtggtgg"
/db_xref="dbSNP:1187267714"
variation 9
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:946984581"
variation 10
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034964994"
variation 13
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1380752567"
variation 14
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:71649639"
variation 15..22
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="ggcggcgg"
/replace="ggcggcggcgg"
/db_xref="dbSNP:774405638"
variation 15
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:988419474"
variation 16
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1303635543"
variation 17
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1196810536"
variation 18
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034963775"
variation 19
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:545638169"
variation 20
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:912282828"
variation 21
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:982660860"
variation 24
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1244365479"
variation 25
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034962468"
variation 26
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:971289195"
variation 27
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:112687176"
variation 28
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034962043"
variation 31
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034961892"
variation 33
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1028155113"
variation 34
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:995780508"
variation 35
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1012710743"
variation 36
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1340898190"
variation 37
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:962643449"
variation 38
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:894568149"
variation 40
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034960739"
variation 41
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:113056818"
variation 42
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034960473"
misc_feature 43..45
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="upstream in-frame stop codon"
variation 43
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:1328765426"
variation 45
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1229019630"
variation 47..48
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="actttggca"
/db_xref="dbSNP:1270159507"
variation 47
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1601096557"
variation 50..51
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="aa"
/replace="aaa"
/db_xref="dbSNP:2034960032"
variation 50
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1033067816"
variation 51
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:769666477"
exon 53..95
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/inference="alignment:Splign:2.1.0"
variation 53
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1311547236"
variation 54
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:958822221"
variation 68
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1259434098"
variation 71
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:766400413"
variation 72
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1181796803"
variation 75
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034922880"
variation 77
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1252844839"
variation 78
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034922588"
variation 79..84
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="cta"
/replace="ctacta"
/db_xref="dbSNP:1170905863"
variation 83
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:17001334"
variation 84..86
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="aac"
/replace="aacaac"
/db_xref="dbSNP:746382572"
variation 86
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:908373223"
variation 87
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034921946"
variation 91
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1425061582"
variation 94
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1415606287"
variation 95
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1318465084"
exon 96..266
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/inference="alignment:Splign:2.1.0"
variation 99
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:764878225"
variation 100
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1343418699"
variation 101
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:762129702"
CDS 103..429
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/EC_number="3.6.1.14"
/note="isoform a precursor is encoded by transcript
variant 6; ATP synthase, H+ transporting, mitochondrial F0
complex, subunit F6; coupling factor 6; mitochondrial ATP
synthase, subunit F6; mitochondrial ATPase coupling factor
6; mitochondrial ATP synthase, coupling factor 6; ATP
synthase-coupling factor 6, mitochondrial;
proliferation-inducing protein 36; ATPase subunit F6; ATP
synthase, H+ transporting, mitochondrial Fo complex
subunit F6; ATP synthase subunit h"
/codon_start=1
/product="ATP synthase-coupling factor 6, mitochondrial
isoform a precursor"
/protein_id="NP_001307195.1"
/db_xref="CCDS:CCDS13574.1"
/db_xref="GeneID:522"
/db_xref="HGNC:HGNC:847"
/db_xref="MIM:603152"
/translation="
MILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA"
misc_feature 103..390
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="Mitochondrial ATP synthase coupling factor 6;
Region: ATP-synt_F6; pfam05511"
/db_xref="CDD:428503"
misc_feature 223..225
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="N6-acetyllysine.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (P18859.1); acetylation site"
misc_feature 238..240
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="N6-acetyllysine.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (P18859.1); acetylation site"
misc_feature 295..297
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:23186163; propagated from
UniProtKB/Swiss-Prot (P18859.1); phosphorylation site"
misc_feature 337..339
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="N6-acetyllysine.
/evidence=ECO:0000250|UniProtKB:P97450; propagated from
UniProtKB/Swiss-Prot (P18859.1); acetylation site"
misc_feature 382..384
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0000250|UniProtKB:P97450; propagated from
UniProtKB/Swiss-Prot (P18859.1); acetylation site"
misc_feature 397..399
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (P18859.1); acetylation site"
misc_feature 415..417
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="N6-acetyllysine.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (P18859.1); acetylation site"
variation 116
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034711676"
variation 117
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034711557"
variation 118
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:927006271"
variation 120
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:753918454"
variation 123
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2123448326"
variation 129..134
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="ctc"
/replace="ctcctc"
/db_xref="dbSNP:1395648371"
variation 129
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:760716483"
variation 130
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:776045850"
variation 132..135
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="ct"
/replace="ctct"
/db_xref="dbSNP:968473118"
variation 137
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:772553715"
variation 139
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:759900968"
variation 142
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1601087521"
variation 143
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1371027232"
variation 144
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:774782770"
variation 150
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:771159388"
variation 151
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:368127706"
variation 152
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:957686958"
variation 160
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1422827044"
variation 165
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:11539871"
variation 166
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:140201687"
variation 167
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:369621263"
variation 170
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:746509917"
variation 171
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1010507611"
variation 174
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:955957513"
variation 175
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1194554045"
variation 179
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1358964233"
variation 180
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:1266353232"
variation 182
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:200421087"
variation 184
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="aa"
/db_xref="dbSNP:1568929727"
variation 185
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:758417035"
variation 188
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1019960803"
variation 190
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:750292108"
variation 191..192
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="aatactttcaaataccaa"
/db_xref="dbSNP:2034707971"
variation 193
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034707871"
variation 194
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:73338261"
variation 200
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:368172603"
variation 202
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1007985613"
variation 205
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:149245672"
variation 207
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1601087317"
variation 211
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:764298477"
variation 212
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:536059571"
variation 214
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1163580012"
variation 215
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1384488440"
variation 217
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:752786714"
variation 222
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1415291165"
variation 223..225
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="aa"
/replace="aaa"
/db_xref="dbSNP:2034706316"
variation 226
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1183897090"
variation 227
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:2034706058"
variation 228
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1430363865"
variation 229..231
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="t"
/replace="ttt"
/db_xref="dbSNP:1393961964"
variation 230
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:567499162"
variation 231
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:373840948"
variation 234
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1231795208"
variation 236
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034705101"
variation 242
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1180317023"
variation 243
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:774671016"
variation 247
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:771372468"
variation 252
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2123447841"
variation 262
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:763191934"
variation 266
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:776490258"
exon 267..391
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/inference="alignment:Splign:2.1.0"
variation 268
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:553688215"
variation 269
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:767606651"
variation 283
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:754987252"
variation 284
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:752144423"
variation 286
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="g"
/db_xref="dbSNP:2034589850"
variation 286
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:533556852"
variation 287
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:182225698"
variation 290
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1221074967"
variation 292
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2123437587"
variation 293
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1345807661"
variation 294
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1485164642"
variation 295
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:919289227"
variation 296
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:763429164"
variation 297
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:573531529"
variation 299
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:773719063"
variation 300
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1322253921"
variation 306
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:765659991"
variation 308..309
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="aa"
/db_xref="dbSNP:749625858"
variation 310
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:972113247"
variation 311
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034588402"
variation 313
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1315768974"
variation 321
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:971480358"
variation 324
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1026381485"
variation 329
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2123437423"
variation 335
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034587977"
variation 343
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:760430074"
variation 344
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:775263367"
variation 346
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1733145396"
variation 348
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:771654361"
variation 349
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:958917807"
variation 351
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1392449805"
variation 359
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1428518577"
variation 361
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:745365748"
variation 362
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:774407202"
variation 365
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1240649245"
variation 367
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034586881"
variation 369
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:770789152"
variation 370
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034586670"
variation 374
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:749156518"
variation 376
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1033273480"
variation 378
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034586352"
variation 379
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034586251"
variation 381
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2123437238"
variation 382
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034586145"
variation 383
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1279645287"
variation 391
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034585888"
exon 392..569
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/inference="alignment:Splign:2.1.0"
variation 395
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1309223162"
variation 399
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:2034569845"
variation 400
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034569737"
variation 402
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1384069257"
variation 408
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034569525"
variation 411
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:377177728"
variation 413
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:2034569275"
variation 417
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1353159026"
variation 419
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1803181"
variation 420
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:11539867"
variation 426
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:138359468"
variation 431
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:768771738"
variation 434
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:747217889"
variation 436
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1427081751"
variation 438
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:2034568501"
variation 442
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:780022177"
variation 445
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:994744738"
variation 447
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1252595304"
variation 449
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:373517431"
variation 450
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:540364911"
variation 452
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1036291223"
variation 453
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1223421103"
variation 460
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034567814"
variation 464
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:369627415"
variation 465
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:200700811"
variation 466
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:757754345"
variation 467
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2123435269"
variation 468
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1330633898"
variation 469
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:917291483"
variation 472
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:754271063"
variation 473
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:372312396"
variation 476
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034567227"
variation 477
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:759141938"
variation 483
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:372728601"
regulatory 497..502
/regulatory_class="polyA_signal_sequence"
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="hexamer: AATAAA"
variation 498
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1806861954"
variation 499
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1474338894"
variation 501
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:1164561108"
variation 505
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034566821"
variation 506
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1369112529"
variation 507
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:939429836"
variation 513
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:937457495"
variation 517
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1214030750"
variation 520
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:926130853"
polyA_site 524
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="major polyA site"
variation 527
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:554635248"
variation 529
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1401817304"
variation 530
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1300411736"
variation 531
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034566177"
variation 533..539
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="t"
/replace="taattct"
/db_xref="dbSNP:1353999352"
variation 535
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1601081670"
variation 537..539
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="t"
/replace="tct"
/db_xref="dbSNP:1281971190"
variation 541
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="a"
/db_xref="dbSNP:1292359789"
variation 542
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034565771"
variation 543
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034565702"
variation 545
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034565630"
regulatory 547..552
/regulatory_class="polyA_signal_sequence"
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="hexamer: AATAAA"
variation 552..556
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="attat"
/db_xref="dbSNP:1340713037"
variation 552
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034565561"
variation 556
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034565408"
variation 557
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034565331"
variation 558
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1223134238"
variation 559
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034565183"
variation 562
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:928021688"
variation 565
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1258470622"
polyA_site 569
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="major polyA site"
ORIGIN
agagcggaggtggtggcggcggaggctttggcagctcgggactgagtgcaaggaatatgcactgaagaggcagcgaacctactaacctttggccgaatcagcatgattcttcagaggctcttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggtgttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaagattagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagagtatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagacatgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccccaggcctgaagaaataaagtaaaattaatctggtaatttgtcacggattagttgtacaactagttagaagtttcagaataaacatgcatttcataactgtcaaatgttcttttaattctgagtccaaataaattatttggtgatgttga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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