2024-05-03 05:43:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001317171 571 bp mRNA linear PRI 31-DEC-2022 DEFINITION Homo sapiens small nuclear ribonucleoprotein polypeptide G (SNRPG), transcript variant 7, mRNA. ACCESSION NM_001317171 VERSION NM_001317171.2 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 571) AUTHORS Campagne S, de Vries T, Malard F, Afanasyev P, Dorn G, Dedic E, Kohlbrecher J, Boehringer D, Clery A and Allain FH. TITLE An in vitro reconstituted U1 snRNP allows the study of the disordered regions of the particle and the interactions with proteins and ligands JOURNAL Nucleic Acids Res 49 (11), e63 (2021) PUBMED 33677607 REFERENCE 2 (bases 1 to 571) AUTHORS Haenig C, Atias N, Taylor AK, Mazza A, Schaefer MH, Russ J, Riechers SP, Jain S, Coughlin M, Fontaine JF, Freibaum BD, Brusendorf L, Zenkner M, Porras P, Stroedicke M, Schnoegl S, Arnsburg K, Boeddrich A, Pigazzini L, Heutink P, Taylor JP, Kirstein J, Andrade-Navarro MA, Sharan R and Wanker EE. TITLE Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains JOURNAL Cell Rep 32 (7), 108050 (2020) PUBMED 32814053 REFERENCE 3 (bases 1 to 571) AUTHORS Luck K, Kim DK, Lambourne L, Spirohn K, Begg BE, Bian W, Brignall R, Cafarelli T, Campos-Laborie FJ, Charloteaux B, Choi D, Cote AG, Daley M, Deimling S, Desbuleux A, Dricot A, Gebbia M, Hardy MF, Kishore N, Knapp JJ, Kovacs IA, Lemmens I, Mee MW, Mellor JC, Pollis C, Pons C, Richardson AD, Schlabach S, Teeking B, Yadav A, Babor M, Balcha D, Basha O, Bowman-Colin C, Chin SF, Choi SG, Colabella C, Coppin G, D'Amata C, De Ridder D, De Rouck S, Duran-Frigola M, Ennajdaoui H, Goebels F, Goehring L, Gopal A, Haddad G, Hatchi E, Helmy M, Jacob Y, Kassa Y, Landini S, Li R, van Lieshout N, MacWilliams A, Markey D, Paulson JN, Rangarajan S, Rasla J, Rayhan A, Rolland T, San-Miguel A, Shen Y, Sheykhkarimli D, Sheynkman GM, Simonovsky E, Tasan M, Tejeda A, Tropepe V, Twizere JC, Wang Y, Weatheritt RJ, Weile J, Xia Y, Yang X, Yeger-Lotem E, Zhong Q, Aloy P, Bader GD, De Las Rivas J, Gaudet S, Hao T, Rak J, Tavernier J, Hill DE, Vidal M, Roth FP and Calderwood MA. TITLE A reference map of the human binary protein interactome JOURNAL Nature 580 (7803), 402-408 (2020) PUBMED 32296183 REFERENCE 4 (bases 1 to 571) AUTHORS Lan Y, Lou J, Hu J, Yu Z, Lyu W and Zhang B. TITLE Downregulation of SNRPG induces cell cycle arrest and sensitizes human glioblastoma cells to temozolomide by targeting Myc through a p53-dependent signaling pathway JOURNAL Cancer Biol Med 17 (1), 112-131 (2020) PUBMED 32296580 REMARK GeneRIF: Downregulation of SNRPG induces cell cycle arrest and sensitizes human glioblastoma cells to temozolomide by targeting Myc through a p53-dependent signaling pathway. REFERENCE 5 (bases 1 to 571) AUTHORS Yi H, Mu L, Shen C, Kong X, Wang Y, Hou Y and Zhang R. TITLE Negative cooperativity between Gemin2 and RNA provides insights into RNA selection and the SMN complex's release in snRNP assembly JOURNAL Nucleic Acids Res 48 (2), 895-911 (2020) PUBMED 31799625 REFERENCE 6 (bases 1 to 571) AUTHORS Fury MG, Zhang W, Christodoulopoulos I and Zieve GW. TITLE Multiple protein: protein interactions between the snRNP common core proteins JOURNAL Exp Cell Res 237 (1), 63-69 (1997) PUBMED 9417867 REFERENCE 7 (bases 1 to 571) AUTHORS Liu Q, Fischer U, Wang F and Dreyfuss G. TITLE The spinal muscular atrophy disease gene product, SMN, and its associated protein SIP1 are in a complex with spliceosomal snRNP proteins JOURNAL Cell 90 (6), 1013-1021 (1997) PUBMED 9323129 REFERENCE 8 (bases 1 to 571) AUTHORS Plessel G, Luhrmann R and Kastner B. TITLE Electron microscopy of assembly intermediates of the snRNP core: morphological similarities between the RNA-free (E.F.G) protein heteromer and the intact snRNP core JOURNAL J Mol Biol 265 (2), 87-94 (1997) PUBMED 9020971 REFERENCE 9 (bases 1 to 571) AUTHORS Hermann H, Fabrizio P, Raker VA, Foulaki K, Hornig H, Brahms H and Luhrmann R. TITLE snRNP Sm proteins share two evolutionarily conserved sequence motifs which are involved in Sm protein-protein interactions JOURNAL EMBO J 14 (9), 2076-2088 (1995) PUBMED 7744013 REFERENCE 10 (bases 1 to 571) AUTHORS Heinrichs V, Hackl W and Luhrmann R. TITLE Direct binding of small nuclear ribonucleoprotein G to the Sm site of small nuclear RNA. Ultraviolet light cross-linking of protein G to the AAU stretch within the Sm site (AAUUUGUGG) of U1 small nuclear ribonucleoprotein reconstituted in vitro JOURNAL J Mol Biol 227 (1), 15-28 (1992) PUBMED 1387914 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AV682126.1, CD109295.1 and AI742299.1. On Aug 13, 2020 this sequence version replaced NM_001317171.1. Summary: The protein encoded by this gene is a component of the U1, U2, U4, and U5 small nuclear ribonucleoprotein complexes, precursors of the spliceosome. The encoded protein may also be a part of the U7 small nuclear ribonucleoprotein complex, which participates in the processing of the 3' end of histone transcripts. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015]. Transcript Variant: This variant (7) lacks an alternate exon in the 5' end compared to variant 1. The resulting isoform (f) is shorter at the N-terminus compared to isoform a. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AI271717.1, BP218705.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2467150, SAMN03267762 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-3 AV682126.1 32-34 4-422 CD109295.1 4-422 423-571 AI742299.1 6-154 c FEATURES Location/Qualifiers source 1..571 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="2" /map="2p13.3" gene 1..571 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="small nuclear ribonucleoprotein polypeptide G" /db_xref="GeneID:6637" /db_xref="HGNC:HGNC:11163" /db_xref="MIM:603542" exon 1..123 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /inference="alignment:Splign:2.1.0" variation 2 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:1697168896" variation 7 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:948243782" variation 8 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1697168765" variation 9 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:910028055" variation 13 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1225022321" variation 17 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:1257672318" variation 18 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1559047817" variation 22 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:75215614" variation 23 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1199934570" variation 25 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:185436321" variation 26 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:376553694" variation 27 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:15656" variation 29 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:918260985" variation 30 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1262779235" variation 31 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:976455711" variation 32 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1574000745" variation 33 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:965064512" variation 34 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:1201528067" variation 36 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:374092476" variation 38 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1574000727" variation 40 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1373048918" variation 41 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1218617499" variation 42 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1318013805" variation 44 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:763792385" variation 45 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:373447773" variation 46 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:191710102" variation 48 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:2104929555" variation 49 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:560407173" variation 50 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:370473703" variation 51 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1303219650" variation 52 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1021384283" variation 53 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1232366380" variation 54 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1697166411" variation 55 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:540402095" variation 56 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:745331803" variation 58 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:780871842" variation 59 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:973600434" variation 60 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1697166056" variation 62 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:756875894" variation 64 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1344532007" variation 65 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:377108614" variation 66 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:758112405" variation 67 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:752545398" variation 68 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1177448774" variation 71..79 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="" /replace="tgagcccgc" /db_xref="dbSNP:1462957586" variation 71 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:766441729" variation 74 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1427335462" variation 75 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:760913250" variation 76 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:750698198" variation 77 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:891674502" variation 79 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:372874888" variation 80..81 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="gg" /replace="ggg" /db_xref="dbSNP:34968038" variation 81 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:375246588" variation 82 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1559047692" variation 84 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="t" /db_xref="dbSNP:1697164788" variation 85 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1697164710" variation 86 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1697164651" variation 88 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:769221300" variation 89 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:763161158" variation 90 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:775954821" variation 91 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:769520794" variation 101 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:1410412790" variation 102 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1697164201" variation 103 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="t" /db_xref="dbSNP:1697164139" variation 105 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:1574000582" variation 109 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:745492903" variation 112 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1034712471" variation 115 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:776461879" variation 116 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:770559448" misc_feature 117..119 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="upstream in-frame stop codon" variation 118 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1406608772" CDS 123..299 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /EC_number="1.8.1.4" /note="isoform f is encoded by transcript variant 7; small nuclear ribonucleoprotein G; snRNP-G; sm protein G" /codon_start=1 /product="small nuclear ribonucleoprotein G isoform f" /protein_id="NP_001304100.1" /db_xref="GeneID:6637" /db_xref="HGNC:HGNC:11163" /db_xref="MIM:603542" /translation="
MKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALERV"
misc_feature <126..290 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="Sm protein G; Region: Sm_G; cd01719" /db_xref="CDD:212466" misc_feature order(126..128,141..143,180..182,243..245,249..254, 258..260,267..281,285..287) /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="heptamer interface [polypeptide binding]; other site" /db_xref="CDD:212466" misc_feature order(126..137,141..179,183..197) /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="Sm1 motif; other site" /db_xref="CDD:212466" misc_feature order(177..179,183..185,255..257,261..263) /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:212466" misc_feature 243..278 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="Sm2 motif; other site" /db_xref="CDD:212466" exon 124..248 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /inference="alignment:Splign:2.1.0" variation 125 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1559044238" variation 127 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1262363713" variation 135 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:867009287" variation 137 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1307562690" variation 140 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:753249485" variation 146 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="t" /db_xref="dbSNP:1361968074" variation 149 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:1696989541" variation 152 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1484789979" variation 158 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696989329" variation 161 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:369987454" variation 162 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1205869193" variation 163..166 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="gggg" /replace="ggggg" /db_xref="dbSNP:1163935716" variation 163 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:759919034" variation 164 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:374726497" variation 167 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:765904173" variation 173 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696988612" variation 175 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696988521" variation 176 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:371683189" variation 182 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:772783462" variation 186 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696988204" variation 191 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696988108" variation 192 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1474110853" variation 196 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1382105736" variation 197 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696987762" variation 198 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:771611571" variation 202 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:111451431" variation 203 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1218804721" variation 212 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:761290389" variation 214 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:753363451" variation 215 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:537908196" variation 216 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1457955347" variation 221 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1193368584" variation 226 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1170388824" variation 233 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:768586959" variation 234 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1373114593" exon 249..571 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /inference="alignment:Splign:2.1.0" variation 253 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:779152735" variation 256 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1471721376" variation 267 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="t" /db_xref="dbSNP:1696788334" variation 270 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="t" /db_xref="dbSNP:755155145" variation 272 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696788154" variation 276 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:754395961" variation 282 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696787957" variation 284 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1573987921" variation 285 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:780488133" variation 291 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:2104906258" variation 293 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1245488576" variation 294 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:756445303" variation 296 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:767160133" variation 301 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1696787418" variation 305 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696787344" variation 309 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:374618408" variation 310 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1573987881" variation 312..317 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="cag" /replace="cagcag" /db_xref="dbSNP:764219909" variation 312 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:111510626" variation 315 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:751262864" variation 319 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:1696786821" variation 323..325 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="ccc" /replace="cccc" /db_xref="dbSNP:1274401864" variation 323 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:1573987853" variation 324 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1366040566" variation 325 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:958021417" variation 326 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1283431167" variation 328 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696786393" variation 330 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:763564874" variation 331..337 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="ctctc" /replace="ctctctc" /db_xref="dbSNP:756127320" variation 331 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:762516246" variation 333 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:765099160" variation 334 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:759307677" variation 335 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:369021360" variation 339 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:748355544" variation 340 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:377653110" variation 340 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="t" /replace="tgttttact" /db_xref="dbSNP:752921568" variation 342 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:768846130" variation 343 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1031280041" variation 345 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:915207550" variation 346 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:989480809" variation 347 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:749396936" variation 348 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:999763437" variation 353 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696785112" variation 355 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1696785041" variation 356 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:890639099" variation 358 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="" /replace="g" /db_xref="dbSNP:534440407" variation 361 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696784743" variation 362 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="t" /db_xref="dbSNP:1052340231" variation 366 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:1408854010" variation 370 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:956811081" variation 374 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696784398" variation 375 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1227232649" variation 377 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:997947487" variation 378 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696783923" variation 379 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1696783831" variation 389 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696783757" variation 392..394 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="" /replace="aga" /db_xref="dbSNP:1696783673" variation 393..395 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="gac" /replace="gacgac" /db_xref="dbSNP:1471781109" variation 395..396 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="" /replace="a" /db_xref="dbSNP:1696783422" variation 395 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696783487" variation 401 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:924001449" variation 403..410 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="taaa" /replace="taaataaa" /db_xref="dbSNP:1411877720" variation 405..409 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="aataa" /replace="aataataa" /db_xref="dbSNP:2104905987" variation 406 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1348496503" variation 408 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:1445044997" variation 411 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696783014" variation 412..415 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="tt" /replace="tttt" /db_xref="dbSNP:1696782783" variation 413 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1362502403" variation 414 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696782867" variation 415 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="t" /db_xref="dbSNP:982703853" variation 416 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1238739024" variation 421..425 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="agtca" /replace="agtcagtca" /db_xref="dbSNP:1573987666" variation 421 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:899546376" variation 430 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1696782341" variation 432 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1306633994" variation 436 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1050242" variation 443 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696782060" variation 446 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1039447167" variation 448 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1210047149" variation 450 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:941071006" variation 452 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1696781672" variation 457 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:771487967" variation 458 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696781457" variation 464 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696781368" variation 465 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1449621735" variation 466 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:1024313239" variation 469 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1253430785" variation 475 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1233350411" variation 476..481 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="tttttt" /replace="ttttttt" /db_xref="dbSNP:1696780644" variation 476 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:14631" variation 481 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1457375452" variation 482 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1131031" variation 485 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:1387153487" variation 486 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="g" /db_xref="dbSNP:1696780244" variation 491..494 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="attt" /replace="atttattt" /db_xref="dbSNP:1445538636" variation 496 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1199592791" variation 500 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:747508089" variation 501 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696779877" variation 503 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1257339351" variation 505 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:952961415" variation 506 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:2272530" variation 507 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1445420089" variation 513 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1026642222" variation 517 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="t" /db_xref="dbSNP:1696779441" variation 520 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:929866211" variation 523 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:1573987536" variation 524 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1696779216" regulatory 529..534 /regulatory_class="polyA_signal_sequence" /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="hexamer: ATTAAA" variation 529 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:993781160" variation 530 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:1283212980" variation 532 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1230129954" variation 533..535 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="aag" /replace="aagaag" /db_xref="dbSNP:1696778825" variation 535 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696778751" variation 537..543 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="gaa" /replace="gaaagaa" /replace="gaaagaaagaa" /db_xref="dbSNP:1216042059" variation 539 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1696778684" variation 542 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:896933760" variation 544..547 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="tctt" /replace="tcttctt" /replace="tctttctt" /db_xref="dbSNP:1380180316" variation 544 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:772584486" variation 546 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="g" /replace="t" /db_xref="dbSNP:927840214" variation 547 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:982316409" regulatory 548..553 /regulatory_class="polyA_signal_sequence" /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="hexamer: ATTAAA" variation 548..552 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="attaa" /replace="attaattaa" /db_xref="dbSNP:2104905731" variation 548 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1196670227" variation 549 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:778147781" variation 558 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="c" /db_xref="dbSNP:2104905727" polyA_site 560 /gene="SNRPG" /gene_synonym="Sm-G; SMG" variation 563 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="c" /replace="t" /db_xref="dbSNP:772399256" variation 565 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /replace="a" /replace="g" /db_xref="dbSNP:1456002498" polyA_site 571 /gene="SNRPG" /gene_synonym="Sm-G; SMG" /note="major polyA site" ORIGIN
gccagacgcaagacgccgggcctacagcgggagcgtgaggaaagccgtgcgttgcgttccaaggcatctgtgagcccgcggagtatacaccatgagcaaagctcaccctcccgagttgaaaaatgaaattaaatggtggcagacatgtccaaggaatattgcggggatttgatccctttatgaaccttgtgatagatgaatgtgtggagatggcgactagtggacaacagaacaatattggaatggtggtaatacgaggaaatagtatcatcatgttagaagccttggaacgagtataaataatggctgttcagcagagaaacccatgtcctctctccatagggcctgttttactatgatgtaaaaattaggtcatgtacattttcatattagactttttgttaaataaacttttgtaatagtcaaaaatgctttctcagatgttctgaatatagaatatcagctctcattccagttttttctaacatgaattttcctggttgacattgatttcaaagggttttatgcattaaagtgaaagaatcttattaaatgtgaaacatggcaagga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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