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Previous release (v1)
2024-04-20 15:28:08, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001317167 548 bp mRNA linear PRI 23-DEC-2022
DEFINITION Homo sapiens small nuclear ribonucleoprotein polypeptide G (SNRPG),
transcript variant 4, mRNA.
ACCESSION NM_001317167
VERSION NM_001317167.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 548)
AUTHORS Campagne S, de Vries T, Malard F, Afanasyev P, Dorn G, Dedic E,
Kohlbrecher J, Boehringer D, Clery A and Allain FH.
TITLE An in vitro reconstituted U1 snRNP allows the study of the
disordered regions of the particle and the interactions with
proteins and ligands
JOURNAL Nucleic Acids Res 49 (11), e63 (2021)
PUBMED 33677607
REFERENCE 2 (bases 1 to 548)
AUTHORS Haenig C, Atias N, Taylor AK, Mazza A, Schaefer MH, Russ J,
Riechers SP, Jain S, Coughlin M, Fontaine JF, Freibaum BD,
Brusendorf L, Zenkner M, Porras P, Stroedicke M, Schnoegl S,
Arnsburg K, Boeddrich A, Pigazzini L, Heutink P, Taylor JP,
Kirstein J, Andrade-Navarro MA, Sharan R and Wanker EE.
TITLE Interactome Mapping Provides a Network of Neurodegenerative Disease
Proteins and Uncovers Widespread Protein Aggregation in Affected
Brains
JOURNAL Cell Rep 32 (7), 108050 (2020)
PUBMED 32814053
REFERENCE 3 (bases 1 to 548)
AUTHORS Luck K, Kim DK, Lambourne L, Spirohn K, Begg BE, Bian W, Brignall
R, Cafarelli T, Campos-Laborie FJ, Charloteaux B, Choi D, Cote AG,
Daley M, Deimling S, Desbuleux A, Dricot A, Gebbia M, Hardy MF,
Kishore N, Knapp JJ, Kovacs IA, Lemmens I, Mee MW, Mellor JC,
Pollis C, Pons C, Richardson AD, Schlabach S, Teeking B, Yadav A,
Babor M, Balcha D, Basha O, Bowman-Colin C, Chin SF, Choi SG,
Colabella C, Coppin G, D'Amata C, De Ridder D, De Rouck S,
Duran-Frigola M, Ennajdaoui H, Goebels F, Goehring L, Gopal A,
Haddad G, Hatchi E, Helmy M, Jacob Y, Kassa Y, Landini S, Li R, van
Lieshout N, MacWilliams A, Markey D, Paulson JN, Rangarajan S,
Rasla J, Rayhan A, Rolland T, San-Miguel A, Shen Y, Sheykhkarimli
D, Sheynkman GM, Simonovsky E, Tasan M, Tejeda A, Tropepe V,
Twizere JC, Wang Y, Weatheritt RJ, Weile J, Xia Y, Yang X,
Yeger-Lotem E, Zhong Q, Aloy P, Bader GD, De Las Rivas J, Gaudet S,
Hao T, Rak J, Tavernier J, Hill DE, Vidal M, Roth FP and Calderwood
MA.
TITLE A reference map of the human binary protein interactome
JOURNAL Nature 580 (7803), 402-408 (2020)
PUBMED 32296183
REFERENCE 4 (bases 1 to 548)
AUTHORS Lan Y, Lou J, Hu J, Yu Z, Lyu W and Zhang B.
TITLE Downregulation of SNRPG induces cell cycle arrest and sensitizes
human glioblastoma cells to temozolomide by targeting Myc through a
p53-dependent signaling pathway
JOURNAL Cancer Biol Med 17 (1), 112-131 (2020)
PUBMED 32296580
REMARK GeneRIF: Downregulation of SNRPG induces cell cycle arrest and
sensitizes human glioblastoma cells to temozolomide by targeting
Myc through a p53-dependent signaling pathway.
REFERENCE 5 (bases 1 to 548)
AUTHORS Yi H, Mu L, Shen C, Kong X, Wang Y, Hou Y and Zhang R.
TITLE Negative cooperativity between Gemin2 and RNA provides insights
into RNA selection and the SMN complex's release in snRNP assembly
JOURNAL Nucleic Acids Res 48 (2), 895-911 (2020)
PUBMED 31799625
REFERENCE 6 (bases 1 to 548)
AUTHORS Fury MG, Zhang W, Christodoulopoulos I and Zieve GW.
TITLE Multiple protein: protein interactions between the snRNP common
core proteins
JOURNAL Exp Cell Res 237 (1), 63-69 (1997)
PUBMED 9417867
REFERENCE 7 (bases 1 to 548)
AUTHORS Liu Q, Fischer U, Wang F and Dreyfuss G.
TITLE The spinal muscular atrophy disease gene product, SMN, and its
associated protein SIP1 are in a complex with spliceosomal snRNP
proteins
JOURNAL Cell 90 (6), 1013-1021 (1997)
PUBMED 9323129
REFERENCE 8 (bases 1 to 548)
AUTHORS Plessel G, Luhrmann R and Kastner B.
TITLE Electron microscopy of assembly intermediates of the snRNP core:
morphological similarities between the RNA-free (E.F.G) protein
heteromer and the intact snRNP core
JOURNAL J Mol Biol 265 (2), 87-94 (1997)
PUBMED 9020971
REFERENCE 9 (bases 1 to 548)
AUTHORS Hermann H, Fabrizio P, Raker VA, Foulaki K, Hornig H, Brahms H and
Luhrmann R.
TITLE snRNP Sm proteins share two evolutionarily conserved sequence
motifs which are involved in Sm protein-protein interactions
JOURNAL EMBO J 14 (9), 2076-2088 (1995)
PUBMED 7744013
REFERENCE 10 (bases 1 to 548)
AUTHORS Heinrichs V, Hackl W and Luhrmann R.
TITLE Direct binding of small nuclear ribonucleoprotein G to the Sm site
of small nuclear RNA. Ultraviolet light cross-linking of protein G
to the AAU stretch within the Sm site (AAUUUGUGG) of U1 small
nuclear ribonucleoprotein reconstituted in vitro
JOURNAL J Mol Biol 227 (1), 15-28 (1992)
PUBMED 1387914
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AI290354.1 and AI742299.1.
Summary: The protein encoded by this gene is a component of the U1,
U2, U4, and U5 small nuclear ribonucleoprotein complexes,
precursors of the spliceosome. The encoded protein may also be a
part of the U7 small nuclear ribonucleoprotein complex, which
participates in the processing of the 3' end of histone
transcripts. Several transcript variants encoding different
isoforms have been found for this gene. [provided by RefSeq, Nov
2015].
Transcript Variant: This variant (4) uses an alternate exon in
place of the first exon compared to variant 1. The resulting
isoform (d) has a shorter and distinct N-terminus compared to
isoform a.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AI290354.1, SRR14243140.11095447.1
[ECO:0000332]
RNAseq introns :: mixed sample support SAMEA1965299,
SAMEA1966682 [ECO:0006172]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-398 AI290354.1 1-398 c
399-548 AI742299.1 1-150 c
FEATURES Location/Qualifiers
source 1..548
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="2"
/map="2p13.3"
gene 1..548
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="small nuclear ribonucleoprotein polypeptide G"
/db_xref="GeneID:6637"
/db_xref="HGNC:HGNC:11163"
/db_xref="MIM:603542"
exon 1..72
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/inference="alignment:Splign:2.1.0"
variation 2
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:768868003"
variation 3
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1574000108"
variation 5
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:957969302"
variation 9
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1697148525"
variation 10
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1440884493"
variation 12..16
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="ttttt"
/replace="tttttt"
/db_xref="dbSNP:1277382735"
variation 12
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1574000102"
variation 15
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1697148334"
variation 17
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1697148207"
variation 18
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:748995660"
variation 21
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1258225223"
variation 25
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1697147998"
variation 29
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1248132484"
variation 30
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:1697147872"
variation 31
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1383433191"
variation 32
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="t"
/db_xref="dbSNP:1697147735"
variation 34
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:750641299"
variation 37
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="t"
/db_xref="dbSNP:1272238420"
variation 44
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:999325159"
variation 49
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:890323447"
variation 51
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:767788658"
variation 52
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1238759258"
variation 53
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:757227988"
variation 57
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:2104928286"
variation 58..59
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace=""
/replace="tt"
/db_xref="dbSNP:759828885"
misc_feature 59..61
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="upstream in-frame stop codon"
variation 59
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1030160328"
variation 60
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:1437292976"
variation 63
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1166767180"
CDS 65..271
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/EC_number="1.8.1.4"
/note="isoform d is encoded by transcript variant 4; small
nuclear ribonucleoprotein G; snRNP-G; sm protein G"
/codon_start=1
/product="small nuclear ribonucleoprotein G isoform d"
/protein_id="NP_001304096.1"
/db_xref="CCDS:CCDS82462.1"
/db_xref="GeneID:6637"
/db_xref="HGNC:HGNC:11163"
/db_xref="MIM:603542"
/translation="
MCLFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALERV"
misc_feature 74..262
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="Sm protein G; Region: Sm_G; cd01719"
/db_xref="CDD:212466"
misc_feature order(74..76,98..100,113..115,152..154,215..217,221..226,
230..232,239..253,257..259)
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="heptamer interface [polypeptide binding]; other
site"
/db_xref="CDD:212466"
misc_feature order(89..109,113..151,155..169)
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="Sm1 motif; other site"
/db_xref="CDD:212466"
misc_feature order(149..151,155..157,227..229,233..235)
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:212466"
misc_feature 215..250
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="Sm2 motif; other site"
/db_xref="CDD:212466"
variation 67
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace=""
/replace="g"
/db_xref="dbSNP:1386396290"
variation 67
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:751664943"
variation 70
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1183458111"
variation 71
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1487052686"
exon 73..95
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/inference="alignment:Splign:2.1.0"
variation 73
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:746433636"
variation 75
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1160283358"
variation 82
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1697022251"
variation 85
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1322847916"
variation 87
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:1697022046"
variation 91
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:1001926555"
variation 92
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="t"
/db_xref="dbSNP:1697021846"
variation 95
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1190819017"
exon 96..220
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/inference="alignment:Splign:2.1.0"
variation 97
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1559044238"
variation 99
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1262363713"
variation 107
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:867009287"
variation 109
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1307562690"
variation 112
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:753249485"
variation 118
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="t"
/db_xref="dbSNP:1361968074"
variation 121
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:1696989541"
variation 124
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1484789979"
variation 130
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696989329"
variation 133
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:369987454"
variation 134
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1205869193"
variation 135..138
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="gggg"
/replace="ggggg"
/db_xref="dbSNP:1163935716"
variation 135
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:759919034"
variation 136
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:374726497"
variation 139
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:765904173"
variation 145
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696988612"
variation 147
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696988521"
variation 148
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:371683189"
variation 154
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:772783462"
variation 158
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696988204"
variation 163
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696988108"
variation 164
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1474110853"
variation 168
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1382105736"
variation 169
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696987762"
variation 170
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:771611571"
variation 174
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:111451431"
variation 175
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1218804721"
variation 184
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:761290389"
variation 186
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:753363451"
variation 187
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:537908196"
variation 188
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1457955347"
variation 193
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1193368584"
variation 198
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1170388824"
variation 205
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:768586959"
variation 206
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1373114593"
exon 221..543
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/inference="alignment:Splign:2.1.0"
variation 225
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:779152735"
variation 228
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1471721376"
variation 239
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="t"
/db_xref="dbSNP:1696788334"
variation 242
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="t"
/db_xref="dbSNP:755155145"
variation 244
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696788154"
variation 248
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:754395961"
variation 254
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696787957"
variation 256
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1573987921"
variation 257
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:780488133"
variation 263
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:2104906258"
variation 265
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1245488576"
variation 266
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:756445303"
variation 268
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:767160133"
variation 273
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1696787418"
variation 277
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696787344"
variation 281
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:374618408"
variation 282
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1573987881"
variation 284..289
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="cag"
/replace="cagcag"
/db_xref="dbSNP:764219909"
variation 284
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:111510626"
variation 287
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:751262864"
variation 291
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:1696786821"
variation 295..297
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="ccc"
/replace="cccc"
/db_xref="dbSNP:1274401864"
variation 295
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:1573987853"
variation 296
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1366040566"
variation 297
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:958021417"
variation 298
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1283431167"
variation 300
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696786393"
variation 302
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:763564874"
variation 303..309
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="ctctc"
/replace="ctctctc"
/db_xref="dbSNP:756127320"
variation 303
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:762516246"
variation 305
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:765099160"
variation 306
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:759307677"
variation 307
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:369021360"
variation 311
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:748355544"
variation 312
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:377653110"
variation 312
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="t"
/replace="tgttttact"
/db_xref="dbSNP:752921568"
variation 314
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:768846130"
variation 315
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1031280041"
variation 317
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:915207550"
variation 318
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:989480809"
variation 319
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:749396936"
variation 320
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:999763437"
variation 325
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696785112"
variation 327
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1696785041"
variation 328
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:890639099"
variation 330
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace=""
/replace="g"
/db_xref="dbSNP:534440407"
variation 333
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696784743"
variation 334
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="t"
/db_xref="dbSNP:1052340231"
variation 338
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:1408854010"
variation 342
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:956811081"
variation 346
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696784398"
variation 347
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1227232649"
variation 349
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:997947487"
variation 350
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696783923"
variation 351
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1696783831"
variation 361
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696783757"
variation 364..366
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace=""
/replace="aga"
/db_xref="dbSNP:1696783673"
variation 365..367
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="gac"
/replace="gacgac"
/db_xref="dbSNP:1471781109"
variation 367..368
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace=""
/replace="a"
/db_xref="dbSNP:1696783422"
variation 367
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696783487"
variation 373
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:924001449"
variation 375..382
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="taaa"
/replace="taaataaa"
/db_xref="dbSNP:1411877720"
variation 377..381
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="aataa"
/replace="aataataa"
/db_xref="dbSNP:2104905987"
variation 378
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1348496503"
variation 380
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:1445044997"
variation 383
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696783014"
variation 384..387
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="tt"
/replace="tttt"
/db_xref="dbSNP:1696782783"
variation 385
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1362502403"
variation 386
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696782867"
variation 387
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="t"
/db_xref="dbSNP:982703853"
variation 388
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1238739024"
variation 393..397
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="agtca"
/replace="agtcagtca"
/db_xref="dbSNP:1573987666"
variation 393
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:899546376"
variation 402
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1696782341"
variation 404
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1306633994"
variation 408
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1050242"
variation 415
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696782060"
variation 418
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1039447167"
variation 420
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1210047149"
variation 422
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:941071006"
variation 424
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1696781672"
variation 429
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:771487967"
variation 430
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696781457"
variation 436
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696781368"
variation 437
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1449621735"
variation 438
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:1024313239"
variation 441
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1253430785"
variation 447
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1233350411"
variation 448..453
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="tttttt"
/replace="ttttttt"
/db_xref="dbSNP:1696780644"
variation 448
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:14631"
variation 453
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1457375452"
variation 454
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1131031"
variation 457
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:1387153487"
variation 458
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="g"
/db_xref="dbSNP:1696780244"
variation 463..466
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="attt"
/replace="atttattt"
/db_xref="dbSNP:1445538636"
variation 468
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1199592791"
variation 472
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:747508089"
variation 473
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696779877"
variation 475
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1257339351"
variation 477
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:952961415"
variation 478
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:2272530"
variation 479
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1445420089"
variation 485
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1026642222"
variation 489
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="t"
/db_xref="dbSNP:1696779441"
variation 492
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:929866211"
variation 495
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:1573987536"
variation 496
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1696779216"
regulatory 501..506
/regulatory_class="polyA_signal_sequence"
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="hexamer: ATTAAA"
variation 501
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:993781160"
variation 502
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:1283212980"
variation 504
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1230129954"
variation 505..507
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="aag"
/replace="aagaag"
/db_xref="dbSNP:1696778825"
variation 507
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696778751"
variation 509..515
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="gaa"
/replace="gaaagaa"
/replace="gaaagaaagaa"
/db_xref="dbSNP:1216042059"
variation 511
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1696778684"
variation 514
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:896933760"
variation 516..519
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="tctt"
/replace="tcttctt"
/replace="tctttctt"
/db_xref="dbSNP:1380180316"
variation 516
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:772584486"
variation 518
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="g"
/replace="t"
/db_xref="dbSNP:927840214"
variation 519
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:982316409"
regulatory 520..525
/regulatory_class="polyA_signal_sequence"
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="hexamer: ATTAAA"
variation 520..524
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="attaa"
/replace="attaattaa"
/db_xref="dbSNP:2104905731"
variation 520
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1196670227"
variation 521
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:778147781"
variation 530
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="c"
/db_xref="dbSNP:2104905727"
polyA_site 532
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
variation 535
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="c"
/replace="t"
/db_xref="dbSNP:772399256"
variation 537
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/replace="a"
/replace="g"
/db_xref="dbSNP:1456002498"
polyA_site 543
/gene="SNRPG"
/gene_synonym="Sm-G; SMG"
/note="major polyA site"
ORIGIN
ggaaggaagtgtttttaaaactacgtgaggcatcagaatccgaaagccactttagtcttagcaaatgtgtttatttatggacaagaagttatcattgaaattaaatggtggcagacatgtccaaggaatattgcggggatttgatccctttatgaaccttgtgatagatgaatgtgtggagatggcgactagtggacaacagaacaatattggaatggtggtaatacgaggaaatagtatcatcatgttagaagccttggaacgagtataaataatggctgttcagcagagaaacccatgtcctctctccatagggcctgttttactatgatgtaaaaattaggtcatgtacattttcatattagactttttgttaaataaacttttgtaatagtcaaaaatgctttctcagatgttctgaatatagaatatcagctctcattccagttttttctaacatgaattttcctggttgacattgatttcaaagggttttatgcattaaagtgaaagaatcttattaaatgtgaaacatggcaaggaaaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]