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Previous release (v1)
2024-05-04 08:43:23, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001252598 415 bp mRNA linear PRI 29-DEC-2022
DEFINITION Homo sapiens colipase (CLPS), transcript variant 3, mRNA.
ACCESSION NM_001252598
VERSION NM_001252598.2
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 415)
AUTHORS Zhang G, He P, Tan H, Budhu A, Gaedcke J, Ghadimi BM, Ried T,
Yfantis HG, Lee DH, Maitra A, Hanna N, Alexander HR and Hussain SP.
TITLE Integration of metabolomics and transcriptomics revealed a fatty
acid network exerting growth inhibitory effects in human pancreatic
cancer
JOURNAL Clin Cancer Res 19 (18), 4983-4993 (2013)
PUBMED 23918603
REMARK GeneRIF: Low CLPS expression is associated with pancreatic cancer.
REFERENCE 2 (bases 1 to 415)
AUTHORS Xiao X, Ferguson MR, Magee KE, Hale PD, Wang Y and Lowe ME.
TITLE The Arg92Cys colipase polymorphism impairs function and secretion
by increasing protein misfolding
JOURNAL J Lipid Res 54 (2), 514-521 (2013)
PUBMED 23204298
REMARK GeneRIF: humans with the Arg92Cys substitution will secrete less
functional colipase
REFERENCE 3 (bases 1 to 415)
AUTHORS Weyrich P, Albet S, Lammers R, Machicao F, Fritsche A, Stefan N and
Haring HU.
TITLE Genetic variability of procolipase associates with altered insulin
secretion in non-diabetic Caucasians
JOURNAL Exp Clin Endocrinol Diabetes 117 (2), 83-87 (2009)
PUBMED 18726866
REMARK GeneRIF: CLPS genetic variability associates with insulin secretory
function in non-diabetic humans and may represent a novel candidate
gene for development of type 2 diabetes
GeneRIF: Observational study of gene-disease association. (HuGE
Navigator)
REFERENCE 4 (bases 1 to 415)
AUTHORS Wermter AK, Scherag A, Holter K, Reichwald K, Lichtner P, Siegfried
W, Blundell J, Lawton C, Whybrow S, Stubbs J, Arch JR, Meitinger T,
Platzer M, Hinney A and Hebebrand J.
TITLE Procolipase gene: no association with early-onset obesity or fat
intake
JOURNAL Obes Facts 2 (1), 40-44 (2009)
PUBMED 20054203
REMARK GeneRIF: found no evidence for an association of pancreatic
colipase(CLPS) single nucleotide polymorphisms rs2766597,
rs41270082, rs3748050, and rs3748051 with obesity or percentage of
dietary fat intake
GeneRIF: Observational study of gene-disease association and
gene-environment interaction. (HuGE Navigator)
REFERENCE 5 (bases 1 to 415)
AUTHORS D'Silva S, Xiao X and Lowe ME.
TITLE A polymorphism in the gene encoding procolipase produces a
colipase, Arg92Cys, with decreased function against long-chain
triglycerides
JOURNAL J Lipid Res 48 (11), 2478-2484 (2007)
PUBMED 17715423
REMARK GeneRIF: Our findings demonstrate that the Arg92Cys polymorphism
decreases the function of Cys92 colipase. This change may
contribute to the development of type 2 diabetes.
REFERENCE 6 (bases 1 to 415)
AUTHORS van Tilbeurgh H, Sarda L, Verger R and Cambillau C.
TITLE Structure of the pancreatic lipase-procolipase complex
JOURNAL Nature 359 (6391), 159-162 (1992)
PUBMED 1522902
REFERENCE 7 (bases 1 to 415)
AUTHORS Sims HF and Lowe ME.
TITLE The human colipase gene: isolation, chromosomal location, and
tissue-specific expression
JOURNAL Biochemistry 31 (31), 7120-7125 (1992)
PUBMED 1643046
REFERENCE 8 (bases 1 to 415)
AUTHORS Davis RC, Xia YR, Mohandas T, Schotz MC and Lusis AJ.
TITLE Assignment of the human pancreatic colipase gene to chromosome
6p21.1 to pter
JOURNAL Genomics 10 (1), 262-265 (1991)
PUBMED 2045105
REFERENCE 9 (bases 1 to 415)
AUTHORS Lowe ME, Rosenblum JL, McEwen P and Strauss AW.
TITLE Cloning and characterization of the human colipase cDNA
JOURNAL Biochemistry 29 (3), 823-828 (1990)
PUBMED 2337598
REFERENCE 10 (bases 1 to 415)
AUTHORS Sternby,B., Engstrom,A., Hellman,U., Vihert,A.M., Sternby,N.H. and
Borgstrom,B.
TITLE The primary sequence of human pancreatic colipase
JOURNAL Biochim Biophys Acta 784 (1), 75-80 (1984)
PUBMED 6691986
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from BP324927.1 and BP321569.1.
On Aug 13, 2020 this sequence version replaced NM_001252598.1.
Summary: The protein encoded by this gene is a cofactor needed by
pancreatic lipase for efficient dietary lipid hydrolysis. It binds
to the C-terminal, non-catalytic domain of lipase, thereby
stabilizing an active conformation and considerably increasing the
overall hydrophobic binding site. The gene product allows lipase to
anchor noncovalently to the surface of lipid micelles,
counteracting the destabilizing influence of intestinal bile salts.
This cofactor is only expressed in pancreatic acinar cells,
suggesting regulation of expression by tissue-specific elements.
Three transcript variants encoding different isoforms have been
found for this gene. [provided by RefSeq, Nov 2011].
Transcript Variant: This variant (3) lacks an alternate in-frame
exon compared to variant 1. The resulting isoform (3) has the same
N- and C-termini but is shorter compared to isoform 1.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BP321569.1, AW583243.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA2145245, SAMEA2151405
[ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-33 BP324927.1 1-33
34-414 BP321569.1 32-412
415-415 BP324927.1 538-538
FEATURES Location/Qualifiers
source 1..415
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6p21.31"
gene 1..415
/gene="CLPS"
/note="colipase"
/db_xref="GeneID:1208"
/db_xref="HGNC:HGNC:2085"
/db_xref="MIM:120105"
exon 1..119
/gene="CLPS"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1312463071"
variation 2
/gene="CLPS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1768395111"
variation 3
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1304945494"
variation 5
/gene="CLPS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:566561357"
variation 7
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:199655623"
variation 8
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:758654606"
variation 9
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:753617155"
variation 10
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:779758516"
variation 11
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:2151066299"
variation 14
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:182775439"
variation 16
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768394527"
variation 17
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:897962921"
variation 19
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1476798164"
variation 21
/gene="CLPS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1040553250"
variation 23
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:750392162"
variation 24
/gene="CLPS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:767121014"
variation 25
/gene="CLPS"
/replace="a"
/replace="t"
/db_xref="dbSNP:756767591"
variation 26
/gene="CLPS"
/replace="c"
/replace="g"
/db_xref="dbSNP:751119258"
variation 27
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:763798105"
variation 29
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:762563597"
variation 30
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:775893258"
variation 31
/gene="CLPS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1768393849"
variation 32
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:765589133"
variation 33
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:3748050"
variation 34
/gene="CLPS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768393491"
CDS 36..251
/gene="CLPS"
/note="isoform 3 preproprotein is encoded by transcript
variant 3; pancreatic colipase preproprotein; colipase,
pancreatic"
/codon_start=1
/product="colipase isoform 3 preproprotein"
/protein_id="NP_001239527.1"
/db_xref="CCDS:CCDS75438.1"
/db_xref="GeneID:1208"
/db_xref="HGNC:HGNC:2085"
/db_xref="MIM:120105"
/translation="
MEKILILLLVALSVAYAAPGPRGIIINLTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ"
sig_peptide 36..86
/gene="CLPS"
/inference="COORDINATES: ab initio prediction:SignalP:4.0"
proprotein 87..248
/gene="CLPS"
/product="colipase isoform 3 proprotein"
misc_feature 87..248
/gene="CLPS"
/note="Colipase; a stoichiometric cofactor for pancreatic
lipase, allowing the enzyme to anchor itself to the
water-lipid interface and stabilizing the active enzyme
conformation; Region: COLIPASE; cl29842"
/db_xref="CDD:453069"
mat_peptide 102..248
/gene="CLPS"
/product="colipase isoform 3"
variation 36
/gene="CLPS"
/replace="a"
/replace="t"
/db_xref="dbSNP:777068073"
variation 41
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1315317085"
variation 44
/gene="CLPS"
/replace="c"
/replace="g"
/db_xref="dbSNP:2151066273"
variation 46..59
/gene="CLPS"
/replace="tcctg"
/replace="tcctgatcctcctg"
/db_xref="dbSNP:751060585"
variation 47
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:771434902"
variation 48
/gene="CLPS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1378018837"
variation 49
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:747055917"
variation 50
/gene="CLPS"
/replace="c"
/replace="g"
/db_xref="dbSNP:773306828"
variation 51
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1400478202"
variation 52..58
/gene="CLPS"
/replace="tcct"
/replace="tcctcct"
/replace="tcctcctcct"
/db_xref="dbSNP:761365160"
variation 53
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:772312585"
variation 58
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:2766597"
variation 59
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1305934138"
variation 60
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1395448153"
variation 61
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:779892659"
variation 63
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1422981055"
variation 64
/gene="CLPS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1391790164"
variation 65
/gene="CLPS"
/replace=""
/replace="c"
/db_xref="dbSNP:1308613334"
variation 65
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:755917684"
variation 66
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:529464575"
variation 69..74
/gene="CLPS"
/replace="ctct"
/replace="ctctct"
/db_xref="dbSNP:1768391681"
variation 69
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:781207545"
variation 71
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768391754"
variation 77
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:200437409"
variation 78
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:200244589"
variation 79
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1768391450"
variation 81..83
/gene="CLPS"
/replace="t"
/replace="tat"
/db_xref="dbSNP:763805542"
variation 82
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768391383"
variation 83
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:560934358"
variation 86
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768391154"
variation 88
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1350639651"
variation 89
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:112222376"
variation 90
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1267702100"
variation 92
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768390851"
variation 93
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768390776"
variation 94
/gene="CLPS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:763736793"
variation 95..99
/gene="CLPS"
/replace="cccc"
/replace="ccccc"
/replace="cccccc"
/db_xref="dbSNP:762528702"
variation 95
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:145002055"
variation 96
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:867356635"
variation 98
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1054340429"
variation 99
/gene="CLPS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:372093288"
variation 100
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:140966197"
variation 101
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1768390026"
variation 102
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1241944041"
variation 104
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:777015087"
variation 111
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768389754"
variation 112
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768389683"
variation 113
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1482413707"
variation 119
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1307951939"
exon 120..415
/gene="CLPS"
/inference="alignment:Splign:2.1.0"
variation 120
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1178438731"
variation 121
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:140627661"
variation 122
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:147555335"
variation 124
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1359439305"
variation 125
/gene="CLPS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:778333504"
variation 126
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:772679554"
variation 127
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1404809311"
variation 128
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:149878789"
variation 136
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:2151065244"
variation 137
/gene="CLPS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:779118221"
variation 139
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1400880683"
variation 144
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:2151065231"
variation 151
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768328138"
variation 154
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1581960591"
variation 155
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1169523042"
variation 156
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:755023217"
variation 157
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:114778877"
variation 159
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1768327637"
variation 163
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1183874815"
variation 166
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:780280266"
variation 170
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:756310741"
variation 174
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1181803210"
variation 175
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:376103498"
variation 178
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1197437577"
variation 179
/gene="CLPS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:762873369"
variation 182
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1204289265"
variation 185
/gene="CLPS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1051934306"
variation 186
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:537217497"
variation 188..206
/gene="CLPS"
/replace="c"
/replace="cgtgggctccatcaccaac"
/db_xref="dbSNP:1768325864"
variation 188
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:765091326"
variation 189
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:150755879"
variation 190
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768326431"
variation 192
/gene="CLPS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1312307939"
variation 193
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1803299"
variation 195
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1448299126"
variation 200
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:556619142"
variation 201
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1581960492"
variation 203
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:770597798"
variation 205
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1439916319"
variation 208
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1295100322"
variation 209
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1768325709"
variation 211
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1351468584"
variation 212
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:760287553"
variation 215
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1425584596"
variation 216
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1246656395"
variation 217
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:2151065172"
variation 218
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768325313"
variation 219
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1581960449"
variation 220
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:932958368"
variation 223
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:922966521"
variation 226
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1384786432"
variation 228
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1193349641"
variation 230
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:573352598"
variation 231
/gene="CLPS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:748533143"
variation 234
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1251323028"
variation 235
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1177205190"
variation 237
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:41270082"
variation 238
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:780396671"
variation 240
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1223621708"
variation 244
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1358326942"
variation 245
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:373598060"
variation 249
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:898044867"
variation 251
/gene="CLPS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1304784652"
variation 252
/gene="CLPS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1241700686"
variation 257
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768323674"
variation 258
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1317046913"
variation 261..263
/gene="CLPS"
/replace="cc"
/replace="ccc"
/db_xref="dbSNP:1305666206"
variation 262
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1338175395"
variation 265
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:780044735"
variation 267
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1369611938"
variation 269
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1293914115"
variation 271
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1404063606"
variation 272
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1037382648"
variation 273
/gene="CLPS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1768322507"
variation 276
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1168053257"
variation 278
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1768322283"
variation 279
/gene="CLPS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1365205137"
variation 286
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1301591156"
variation 288
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:756326802"
variation 289
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:750710592"
variation 293
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:2151065108"
variation 294
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1452730369"
variation 298..312
/gene="CLPS"
/replace="t"
/replace="taggcgcaggggcat"
/db_xref="dbSNP:1194570055"
variation 298
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1224205522"
variation 300
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768321663"
variation 301
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:567711356"
variation 302
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:546150357"
variation 303
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1488185028"
variation 304
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768321423"
variation 307
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1300212463"
variation 308
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:2151065094"
variation 309
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1223275548"
variation 311..312
/gene="CLPS"
/replace=""
/replace="at"
/db_xref="dbSNP:2151065086"
variation 312..317
/gene="CLPS"
/replace="tctc"
/replace="tctctc"
/db_xref="dbSNP:2151065083"
variation 314
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768321168"
variation 319
/gene="CLPS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:925088581"
variation 321
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1471843696"
variation 322
/gene="CLPS"
/replace=""
/replace="g"
/db_xref="dbSNP:1162781876"
variation 322
/gene="CLPS"
/replace="c"
/replace="g"
/db_xref="dbSNP:2151065078"
variation 329
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:528094398"
variation 330
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:552461215"
variation 334
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1165432233"
variation 335
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768320530"
variation 337
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768320431"
variation 338
/gene="CLPS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:530603346"
variation 339
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:913951003"
variation 340
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1384899474"
variation 343
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1768319979"
variation 345
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1327896416"
variation 348
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1445127050"
variation 351
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1768319680"
variation 353
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1283140290"
variation 355
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:563503714"
variation 356
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1287148024"
variation 357
/gene="CLPS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1248752506"
variation 358
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:542339898"
variation 361
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1353365059"
variation 363..366
/gene="CLPS"
/replace="at"
/replace="atat"
/db_xref="dbSNP:1440958723"
variation 363
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1217880651"
variation 364
/gene="CLPS"
/replace="t"
/replace="tt"
/db_xref="dbSNP:2151065049"
variation 365
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768318876"
variation 366..368
/gene="CLPS"
/replace="t"
/replace="tct"
/db_xref="dbSNP:1768318538"
variation 366
/gene="CLPS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:530258031"
variation 368
/gene="CLPS"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1467681587"
variation 370
/gene="CLPS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1768318291"
variation 372
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:992255903"
variation 381
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:559893672"
variation 382
/gene="CLPS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:541389506"
variation 383
/gene="CLPS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1768317836"
variation 384
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768317738"
variation 389
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1378471288"
variation 390
/gene="CLPS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1425414747"
variation 398
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768317414"
variation 399
/gene="CLPS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1768317330"
variation 400
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768317236"
variation 402
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1159064272"
variation 406
/gene="CLPS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1386648954"
variation 407
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1412349483"
variation 409
/gene="CLPS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1033716642"
variation 412
/gene="CLPS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1340476605"
variation 413..415
/gene="CLPS"
/replace="tt"
/replace="ttt"
/db_xref="dbSNP:2151065022"
variation 413
/gene="CLPS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:980985528"
variation 415
/gene="CLPS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1194150257"
ORIGIN
gtctcccgccacccacaccagctgtcccactcaccatggagaagatcctgatcctcctgcttgtcgccctctctgtggcctatgcagctcctggcccccgggggatcattatcaacctgacgctctatgggatttactacaagtgtccctgtgagcgtggcctgacctgtgagggagacaagaccatcgtgggctccatcaccaacaccaactttggcatctgccatgacgctggacgctccaagcagtgagactgcccacccactcccacacctagcccagaatgctgtaggccactaggcgcaggggcatctctcccctgctccagcgcatctcccgggctggccacctccttgaccagcatatctgttttctgattgcgctcttcacaattaaaggcctcctgcaaaccttt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]