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Previous release (v1)
2024-04-23 20:04:05, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001037497 397 bp mRNA linear PRI 24-DEC-2022
DEFINITION Homo sapiens defensin beta 110 (DEFB110), transcript variant 1,
mRNA.
ACCESSION NM_001037497
VERSION NM_001037497.2
KEYWORDS RefSeq; MANE Select.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 397)
AUTHORS Rodriguez A, Pedersen MO, Villegas E, Rivas-Santiago B,
Villegas-Moreno J, Amero C, Norton RS and Corzo G.
TITLE Antimicrobial activity and structure of a consensus human
beta-defensin and its comparison to a novel putative hBD10
JOURNAL Proteins 88 (1), 175-186 (2020)
PUBMED 31325337
REMARK GeneRIF: Antimicrobial activity and structure of a consensus human
beta-defensin and its comparison to a novel putative hBD10.
REFERENCE 2 (bases 1 to 397)
AUTHORS Patil AA, Cai Y, Sang Y, Blecha F and Zhang G.
TITLE Cross-species analysis of the mammalian beta-defensin gene family:
presence of syntenic gene clusters and preferential expression in
the male reproductive tract
JOURNAL Physiol Genomics 23 (1), 5-17 (2005)
PUBMED 16033865
REMARK GeneRIF: The encoded protein is thought to have antimicrobial
activity.
REFERENCE 3 (bases 1 to 397)
AUTHORS Schutte BC, Mitros JP, Bartlett JA, Walters JD, Jia HP, Welsh MJ,
Casavant TL and McCray PB Jr.
TITLE Discovery of five conserved beta -defensin gene clusters using a
computational search strategy
JOURNAL Proc Natl Acad Sci U S A 99 (4), 2129-2133 (2002)
PUBMED 11854508
REMARK Erratum:[Proc Natl Acad Sci U S A 2002 Oct 29;99(22):14611]
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AL138879.10 and DQ012015.1.
On May 17, 2019 this sequence version replaced NM_001037497.1.
Summary: Defensins form a family of antimicrobial and cytotoxic
peptides made by neutrophils. Defensins are short, processed
peptide molecules that are classified by structure into three
groups: alpha-defensins, beta-defensins and theta-defensins. All
beta-defensin genes are densely clustered in four to five syntenic
chromosomal regions. Two transcript variants encoding different
isoforms have been found for this gene. [provided by RefSeq, Oct
2014].
Transcript Variant: This variant (1) represents the longer
transcript and encodes the longer isoform (a, also known as
DEFB111).
##Evidence-Data-START##
Transcript exon combination :: DQ012015.1, BX111343.1 [ECO:0000332]
##Evidence-Data-END##
##RefSeq-Attributes-START##
MANE Ensembl match :: ENST00000371148.3/
ENSP00000360190.2
Protein has antimicrobial activity :: PMID: 16033865
RefSeq Select criteria :: based on conservation,
expression, longest protein
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-13 AL138879.10 70961-70973 c
14-397 DQ012015.1 1-384
FEATURES Location/Qualifiers
source 1..397
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6p12.3"
gene 1..397
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/note="defensin beta 110"
/db_xref="GeneID:245913"
/db_xref="HGNC:HGNC:18091"
exon 1..114
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:938735504"
variation 5
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:758334210"
misc_feature 9..11
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/note="upstream in-frame stop codon"
variation 9
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1333888005"
variation 10
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1281316935"
variation 16
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:780736635"
variation 17
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1774426478"
variation 20..25
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="agg"
/replace="aggagg"
/db_xref="dbSNP:1774426362"
variation 23
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1774426448"
variation 24
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/db_xref="dbSNP:1774426408"
variation 25
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:754490484"
variation 26
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:746336764"
variation 28
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1774426235"
variation 29
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:779419124"
variation 30
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:757540313"
variation 33..37
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="cccc"
/replace="ccccc"
/replace="cccccc"
/db_xref="dbSNP:1290565691"
variation 33
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:907268768"
variation 34
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:754274217"
variation 35
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:930113425"
variation 36
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1774425975"
variation 37
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:2113944665"
variation 38..44
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="tttttt"
/replace="ttttttt"
/replace="tttttttt"
/db_xref="dbSNP:34202705"
variation 38
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1243337386"
variation 40
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1483625301"
variation 41
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1207705571"
variation 42
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:764220524"
variation 43
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1774425052"
variation 44
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:756420415"
variation 45
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:752979267"
variation 46
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:372732033"
variation 48
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:937352225"
variation 51
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:10948540"
variation 53
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1774424686"
variation 55
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/db_xref="dbSNP:759716015"
variation 59
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:774379002"
CDS 60..263
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/note="isoform a precursor is encoded by transcript
variant 1; defensin, beta 10; beta-defensin 110;
beta-defensin 10; beta-defensin 111; defensin, beta 110
locus"
/codon_start=1
/product="beta-defensin 110 isoform a precursor"
/protein_id="NP_001032586.1"
/db_xref="CCDS:CCDS34475.1"
/db_xref="GeneID:245913"
/db_xref="HGNC:HGNC:18091"
/translation="
MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPGTHCCLQQ"
sig_peptide 60..116
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/inference="COORDINATES: ab initio prediction:SignalP:4.0"
mat_peptide 117..260
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/product="beta-defensin 110 isoform a"
/experiment="DESCRIPTION:antimicrobial peptide[PMID:
16033865]"
misc_feature 159..251
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/note="Beta defensin; Region: Defensin_beta_2; pfam13841"
/db_xref="CDD:433520"
variation 60
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:551156858"
variation 64
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:778591757"
variation 65
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:199571974"
variation 67
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="g"
/replace="t"
/db_xref="dbSNP:773124595"
variation 71
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:978851282"
variation 72
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:942924158"
variation 73..79
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="tttttt"
/replace="ttttttt"
/db_xref="dbSNP:772119246"
variation 74
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:769317505"
variation 77
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1366353758"
variation 78
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1774424186"
variation 86
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:9473719"
variation 89
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:191228062"
variation 91
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1774423812"
variation 92
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1020427437"
variation 94
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1202989604"
variation 96
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:985777800"
variation 99
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1774423496"
variation 108
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1774423434"
variation 110
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:746571991"
variation 111
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:199802995"
variation 112
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:771539908"
exon 115..397
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/inference="alignment:Splign:2.1.0"
variation 115
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:775126237"
variation 117..121
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="aaaa"
/replace="aaaaa"
/db_xref="dbSNP:1561992477"
variation 117
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:771498764"
variation 118
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:1561992482"
variation 121
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1321969922"
variation 122
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="g"
/replace="t"
/db_xref="dbSNP:749734054"
variation 125..128
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="at"
/replace="atat"
/db_xref="dbSNP:747658017"
variation 127
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1435437833"
variation 131
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:539579125"
variation 132
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/db_xref="dbSNP:199574970"
variation 133
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:770230348"
variation 134
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:140096930"
variation 135
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1582368629"
variation 136
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:748568152"
variation 138
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1048230549"
variation 140..141
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace=""
/replace="ctctcttcttgg"
/db_xref="dbSNP:1774371539"
variation 141
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1582368614"
variation 142
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:147809825"
variation 144
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1774371363"
variation 145
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:200388733"
variation 147
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:781532241"
variation 152
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/db_xref="dbSNP:1189306838"
variation 154
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:755318636"
variation 155
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:751577080"
variation 157
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1212448032"
variation 159
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:145542651"
variation 161
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace=""
/replace="g"
/db_xref="dbSNP:1774370590"
variation 161
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:76111595"
variation 163
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:765136276"
variation 165
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:761565401"
variation 170
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:2113942234"
variation 174
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:1774370264"
variation 175
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1298914741"
variation 176
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1774370143"
variation 177
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:763727685"
variation 178
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="g"
/replace="t"
/db_xref="dbSNP:1774369974"
variation 180
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1363782695"
variation 181
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:2113942219"
variation 183
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:574783169"
variation 184
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1449742388"
variation 185
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:767010832"
variation 192
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1333243392"
variation 193
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:1432566491"
variation 199
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1173414522"
variation 200
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:773742589"
variation 201
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1169094358"
variation 202..205
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="aaa"
/replace="aaaa"
/db_xref="dbSNP:778451564"
variation 202
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:770461152"
variation 205
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:748518784"
variation 209
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1483697603"
variation 210
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:2113942189"
variation 214
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:777193684"
variation 215
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:115648436"
variation 219
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="g"
/replace="t"
/db_xref="dbSNP:887946667"
variation 220
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:747187057"
variation 222
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1049306558"
variation 223
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:770964208"
variation 225
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:142467717"
variation 228
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1354141612"
variation 233
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1228253398"
variation 234
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/db_xref="dbSNP:1340908219"
variation 236
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:758483289"
variation 241
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:148807171"
variation 244
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:778818375"
variation 251
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace=""
/replace="c"
/db_xref="dbSNP:1412730820"
variation 251
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:757246675"
variation 256
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:753788553"
variation 258
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:763813750"
variation 259
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1485474023"
variation 262
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:900793077"
variation 264
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:761064329"
variation 265
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:144223291"
variation 266
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:375609976"
variation 267
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:767122073"
variation 269
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1192609203"
variation 271..277
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="agaa"
/replace="agaagaa"
/db_xref="dbSNP:1774366820"
variation 278
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:912285989"
variation 279
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:987870703"
variation 280
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1424415173"
variation 285
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:367709478"
variation 286
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:773799148"
variation 289
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:765825274"
variation 291
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="g"
/replace="t"
/db_xref="dbSNP:956867811"
variation 293
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:147471663"
variation 295
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1774366114"
variation 297
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1358462099"
variation 299
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1205129777"
variation 301
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/db_xref="dbSNP:1774365913"
variation 304
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1774365869"
variation 305
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:552388748"
variation 306
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1267690240"
variation 309
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:13437462"
variation 310
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:368447460"
variation 311
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1288724616"
variation 314
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1774365270"
variation 316
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:540239881"
variation 322
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:370105943"
variation 327
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1774365087"
variation 328
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:1774365029"
variation 333
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:763177102"
variation 337
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1582368368"
variation 338
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1774364844"
variation 340
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:562264085"
variation 342
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1014976165"
variation 343
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1206913011"
variation 345
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1582368361"
variation 347
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="g"
/replace="t"
/db_xref="dbSNP:375804733"
variation 349
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1161796677"
variation 351
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/db_xref="dbSNP:1354507304"
variation 353
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:576645543"
variation 354
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1458782864"
variation 355
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1774364208"
variation 356
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:952523997"
variation 359
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1177194536"
variation 360
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1774364048"
variation 363
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1004976606"
variation 367
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1561992331"
variation 373
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="t"
/db_xref="dbSNP:1774363920"
variation 374
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:887894343"
variation 378
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:1303307800"
variation 379
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1026731165"
variation 383
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1232816496"
variation 384
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1774363731"
variation 385
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:1774363675"
variation 386
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="t"
/db_xref="dbSNP:1774363635"
variation 388
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="g"
/replace="t"
/db_xref="dbSNP:1373619917"
variation 391
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="c"
/db_xref="dbSNP:1366835567"
variation 392
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="c"
/replace="g"
/db_xref="dbSNP:1774363467"
variation 397
/gene="DEFB110"
/gene_synonym="DEFB-10; DEFB-11; DEFB111"
/replace="a"
/replace="g"
/db_xref="dbSNP:193184843"
ORIGIN
aaaacaactgacttgaaaaaggaggtctgttgccccctttttttaagaaactctctaccatgaagattcaactttttttctttattctgcacttttgggtcacaattttaccagccaaaaagaaatatcctgagtatggtagcttggacttgaggagagagtgcagaataggtaatggtcaatgtaaaaatcagtgtcatgaaaatgaaattaggattgcttactgcataagacctggaactcattgctgcttgcagcagtaacgatgacagaagaaaagagtcacaagctccaagaagagagaccagcgttattaagttttcccagcacatccttcaaggcgtgtgtgtctctataatacacaagaactaaataaaaattaatgttgaaccattca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]