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Previous release (v1)
2024-04-26 05:35:34, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001003701 590 bp mRNA linear PRI 29-DEC-2022
DEFINITION Homo sapiens ATP synthase peripheral stalk subunit F6 (ATP5PF),
transcript variant 5, mRNA; nuclear gene for mitochondrial product.
ACCESSION NM_001003701
VERSION NM_001003701.2
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 590)
AUTHORS Luck K, Kim DK, Lambourne L, Spirohn K, Begg BE, Bian W, Brignall
R, Cafarelli T, Campos-Laborie FJ, Charloteaux B, Choi D, Cote AG,
Daley M, Deimling S, Desbuleux A, Dricot A, Gebbia M, Hardy MF,
Kishore N, Knapp JJ, Kovacs IA, Lemmens I, Mee MW, Mellor JC,
Pollis C, Pons C, Richardson AD, Schlabach S, Teeking B, Yadav A,
Babor M, Balcha D, Basha O, Bowman-Colin C, Chin SF, Choi SG,
Colabella C, Coppin G, D'Amata C, De Ridder D, De Rouck S,
Duran-Frigola M, Ennajdaoui H, Goebels F, Goehring L, Gopal A,
Haddad G, Hatchi E, Helmy M, Jacob Y, Kassa Y, Landini S, Li R, van
Lieshout N, MacWilliams A, Markey D, Paulson JN, Rangarajan S,
Rasla J, Rayhan A, Rolland T, San-Miguel A, Shen Y, Sheykhkarimli
D, Sheynkman GM, Simonovsky E, Tasan M, Tejeda A, Tropepe V,
Twizere JC, Wang Y, Weatheritt RJ, Weile J, Xia Y, Yang X,
Yeger-Lotem E, Zhong Q, Aloy P, Bader GD, De Las Rivas J, Gaudet S,
Hao T, Rak J, Tavernier J, Hill DE, Vidal M, Roth FP and Calderwood
MA.
TITLE A reference map of the human binary protein interactome
JOURNAL Nature 580 (7803), 402-408 (2020)
PUBMED 32296183
REFERENCE 2 (bases 1 to 590)
AUTHORS Fasci D, van Ingen H, Scheltema RA and Heck AJR.
TITLE Histone Interaction Landscapes Visualized by Crosslinking Mass
Spectrometry in Intact Cell Nuclei
JOURNAL Mol Cell Proteomics 17 (10), 2018-2033 (2018)
PUBMED 30021884
REFERENCE 3 (bases 1 to 590)
AUTHORS Bai B, Xie B, Pan Z, Shan L, Zhao J and Zhu H.
TITLE Identification of candidate genes and long non-coding RNAs
associated with the effect of ATP5J in colorectal cancer
JOURNAL Int J Oncol 52 (4), 1129-1138 (2018)
PUBMED 29484395
REMARK GeneRIF: AKT2 and XIST expression was identified as a potential
biomarker participating in the effect of ATP5J in colorectal cancer
REFERENCE 4 (bases 1 to 590)
AUTHORS Floyd BJ, Wilkerson EM, Veling MT, Minogue CE, Xia C, Beebe ET,
Wrobel RL, Cho H, Kremer LS, Alston CL, Gromek KA, Dolan BK,
Ulbrich A, Stefely JA, Bohl SL, Werner KM, Jochem A, Westphall MS,
Rensvold JW, Taylor RW, Prokisch H, Kim JP, Coon JJ and Pagliarini
DJ.
TITLE Mitochondrial Protein Interaction Mapping Identifies Regulators of
Respiratory Chain Function
JOURNAL Mol Cell 63 (4), 621-632 (2016)
PUBMED 27499296
REFERENCE 5 (bases 1 to 590)
AUTHORS Kawai M, Osanai T, Tanaka M, Magota K, Tomita H and Okumura K.
TITLE Mitochondrial Inhibitory Factor Protein 1 Functions as an
Endogenous Inhibitor for Coupling Factor 6
JOURNAL J Cell Biochem 117 (7), 1680-1687 (2016)
PUBMED 26659871
REMARK GeneRIF: CF6-induced increase in apoptotic cells was blocked by
immature or mature IF1, being accompanied by protein kinase B (PKB)
phosphorylation. IF1 antagonizes the pro-apoptotic action of CF6 by
relief of intracellular acidification and resultant phosphorylation
of PKB.
REFERENCE 6 (bases 1 to 590)
AUTHORS Adams MD, Kerlavage AR, Fleischmann RD, Fuldner RA, Bult CJ, Lee
NH, Kirkness EF, Weinstock KG, Gocayne JD, White O et al.
TITLE Initial assessment of human gene diversity and expression patterns
based upon 83 million nucleotides of cDNA sequence
JOURNAL Nature 377 (6547 Suppl), 3-174 (1995)
PUBMED 7566098
REFERENCE 7 (bases 1 to 590)
AUTHORS Hochstrasser DF, Frutiger S, Paquet N, Bairoch A, Ravier F,
Pasquali C, Sanchez JC, Tissot JD, Bjellqvist B, Vargas R et al.
TITLE Human liver protein map: a reference database established by
microsequencing and gel comparison
JOURNAL Electrophoresis 13 (12), 992-1001 (1992)
PUBMED 1286669
REFERENCE 8 (bases 1 to 590)
AUTHORS Higuti T, Tsurumi C, Kawamura Y, Tsujita H, Osaka F, Yoshihara Y,
Tani I, Tanaka K and Ichihara A.
TITLE Molecular cloning of cDNA for the import precursor of human
coupling factor 6 of H(+)-ATP synthase in mitochondria
JOURNAL Biochem Biophys Res Commun 178 (2), 793-799 (1991)
PUBMED 1830479
REFERENCE 9 (bases 1 to 590)
AUTHORS Javed AA, Ogata K and Sanadi DR.
TITLE Human mitochondrial ATP synthase: cloning cDNA for the
nuclear-encoded precursor of coupling factor 6
JOURNAL Gene 97 (2), 307-310 (1991)
PUBMED 1825642
REFERENCE 10 (bases 1 to 590)
AUTHORS Boyer,P.D., Cross,R.L. and Momsen,W.
TITLE A new concept for energy coupling in oxidative phosphorylation
based on a molecular explanation of the oxygen exchange reactions
JOURNAL Proc Natl Acad Sci U S A 70 (10), 2837-2839 (1973)
PUBMED 4517936
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from BC001178.1, BI093033.1,
BC066310.1 and AI085837.1.
On Aug 11, 2020 this sequence version replaced NM_001003701.1.
Summary: Mitochondrial ATP synthase catalyzes ATP synthesis,
utilizing an electrochemical gradient of protons across the inner
membrane during oxidative phosphorylation. It is composed of two
linked multi-subunit complexes: the soluble catalytic core, F1, and
the membrane-spanning component, Fo, which comprises the proton
channel. The F1 complex consists of 5 different subunits (alpha,
beta, gamma, delta, and epsilon) assembled in a ratio of 3 alpha, 3
beta, and a single representative of the other 3. The Fo complex
has nine subunits (a, b, c, d, e, f, g, F6 and 8). This gene
encodes the F6 subunit of the Fo complex. The F6 subunit is
required for F1 and Fo interactions. Alternatively spliced
transcript variants encoding different isoforms have been
identified for this gene. This gene has 1 or more pseudogenes.
[provided by RefSeq, Feb 2016].
Transcript Variant: This variant (5) differs in the 5' UTR and the
5' coding region, compared to variant 1. The predicted isoform (b)
is longer, and it contains a distinct N-terminus, compared to
isoform a. The translation initiation site for this transcript is
inferred.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: DT217787.1, BG563080.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA2155371 [ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
gene product(s) localized to mito. :: reported by MitoCarta
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-21 BC001178.1 620-640
22-116 BI093033.1 4-98
117-545 BC001178.1 686-1114
546-588 BC066310.1 548-590
589-590 AI085837.1 28-29 c
FEATURES Location/Qualifiers
source 1..590
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="21"
/map="21q21.3"
gene 1..590
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="ATP synthase peripheral stalk subunit F6"
/db_xref="GeneID:522"
/db_xref="HGNC:HGNC:847"
/db_xref="MIM:603152"
exon 1..116
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1415523242"
variation 2
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:912340638"
variation 3
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2123469219"
variation 4..5
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="g"
/db_xref="dbSNP:1353297029"
variation 4
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1336661775"
variation 5
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034980269"
variation 6
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:986955749"
variation 7..8
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="gg"
/db_xref="dbSNP:1601097488"
variation 7
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:538727472"
variation 8
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1028414381"
variation 9
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:973670512"
variation 10
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034979603"
variation 11
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1343738697"
variation 14
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1219331681"
variation 16
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2123469075"
variation 20
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034979205"
variation 21
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1280601159"
misc_feature 22..24
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="upstream in-frame stop codon"
variation 22
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:1436014468"
variation 23
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2025315901"
variation 24
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:566648184"
variation 25
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1601097415"
variation 26
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:756849107"
variation 27
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1814122150"
variation 28
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:962620933"
variation 29
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:988472018"
variation 30
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:1015434762"
variation 32
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1004030356"
variation 34
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1484140325"
variation 36
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:749264162"
variation 37
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:546547593"
variation 38
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1246368047"
variation 40
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1316548346"
variation 43
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1417918468"
variation 44
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034976868"
variation 46
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1429731149"
variation 48
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1169622525"
variation 50..53
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="ga"
/replace="gaga"
/db_xref="dbSNP:1223665972"
variation 50
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034976456"
variation 52
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034976360"
variation 53
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:763296625"
variation 54
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1330183997"
variation 55
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:773516625"
variation 56
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:769809435"
variation 58
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1013407966"
variation 59
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:748258092"
variation 60
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:777066588"
variation 61
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034975189"
variation 62
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1288444147"
variation 63
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1408751443"
variation 64
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1339958482"
variation 65
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:769222928"
variation 66
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:889638263"
variation 67
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:530041558"
variation 69
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1295844469"
variation 70
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:894523632"
variation 71
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2123468575"
variation 73
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2123468561"
variation 74
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="t"
/db_xref="dbSNP:773241564"
variation 74
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:780429739"
variation 75
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1568933434"
variation 76
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:567696392"
variation 77
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1412896047"
variation 78
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:748989957"
variation 79
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1240496120"
variation 80
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:777451017"
variation 82
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:755645501"
variation 83
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1192876275"
variation 84
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1054865077"
variation 85
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1189835647"
variation 86
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:2034971977"
variation 88
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:935962541"
variation 89
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:369659239"
variation 91
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1392597287"
variation 92
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:752238405"
variation 93
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034971267"
variation 95
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1601097039"
variation 97
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:766878572"
variation 98
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1330934280"
CDS 100..450
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/EC_number="3.6.1.14"
/note="isoform b precursor is encoded by transcript
variant 5; ATP synthase, H+ transporting, mitochondrial F0
complex, subunit F6; coupling factor 6; mitochondrial ATP
synthase, subunit F6; mitochondrial ATPase coupling factor
6; mitochondrial ATP synthase, coupling factor 6; ATP
synthase-coupling factor 6, mitochondrial;
proliferation-inducing protein 36; ATPase subunit F6; ATP
synthase, H+ transporting, mitochondrial Fo complex
subunit F6; ATP synthase subunit h"
/codon_start=1
/product="ATP synthase-coupling factor 6, mitochondrial
isoform b precursor"
/protein_id="NP_001003701.1"
/db_xref="CCDS:CCDS46637.1"
/db_xref="GeneID:522"
/db_xref="HGNC:HGNC:847"
/db_xref="MIM:603152"
/translation="
MHCDGGISMILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVDASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA"
misc_feature 124..411
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="Mitochondrial ATP synthase coupling factor 6;
Region: ATP-synt_F6; pfam05511"
/db_xref="CDD:428503"
variation 100
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:754969271"
variation 101
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2123468263"
variation 105
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:751499595"
variation 106
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:766297100"
variation 107
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:762816031"
variation 108
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1387889589"
variation 109
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1367436251"
variation 110
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:773343273"
variation 112
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1437793379"
variation 114
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1041976059"
variation 115
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:71649640"
variation 116
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034969223"
exon 117..287
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/inference="alignment:Splign:2.1.0"
variation 120
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:764878225"
variation 121
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1343418699"
variation 122
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:762129702"
variation 137
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034711676"
variation 138
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034711557"
variation 139
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:927006271"
variation 141
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:753918454"
variation 144
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2123448326"
variation 150..155
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="ctc"
/replace="ctcctc"
/db_xref="dbSNP:1395648371"
variation 150
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:760716483"
variation 151
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:776045850"
variation 153..156
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="ct"
/replace="ctct"
/db_xref="dbSNP:968473118"
variation 158
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:772553715"
variation 160
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:759900968"
variation 163
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1601087521"
variation 164
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1371027232"
variation 165
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:774782770"
variation 171
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:771159388"
variation 172
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:368127706"
variation 173
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:957686958"
variation 181
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1422827044"
variation 186
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:11539871"
variation 187
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:140201687"
variation 188
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:369621263"
variation 191
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:746509917"
variation 192
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1010507611"
variation 195
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:955957513"
variation 196
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1194554045"
variation 200
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1358964233"
variation 201
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:1266353232"
variation 203
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:200421087"
variation 205
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="aa"
/db_xref="dbSNP:1568929727"
variation 206
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:758417035"
variation 209
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1019960803"
variation 211
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:750292108"
variation 212..213
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="aatactttcaaataccaa"
/db_xref="dbSNP:2034707971"
variation 214
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034707871"
variation 215
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:73338261"
variation 221
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:368172603"
variation 223
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1007985613"
variation 226
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:149245672"
variation 228
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1601087317"
variation 232
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:764298477"
variation 233
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:536059571"
variation 235
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1163580012"
variation 236
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1384488440"
variation 238
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:752786714"
variation 243
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1415291165"
variation 244..246
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="aa"
/replace="aaa"
/db_xref="dbSNP:2034706316"
variation 247
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1183897090"
variation 248
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:2034706058"
variation 249
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1430363865"
variation 250..252
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="t"
/replace="ttt"
/db_xref="dbSNP:1393961964"
variation 251
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:567499162"
variation 252
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:373840948"
variation 255
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1231795208"
variation 257
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034705101"
variation 263
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1180317023"
variation 264
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:774671016"
variation 268
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:771372468"
variation 273
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2123447841"
variation 283
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:763191934"
variation 287
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:776490258"
exon 288..412
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/inference="alignment:Splign:2.1.0"
variation 289
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:553688215"
variation 290
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:767606651"
variation 304
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:754987252"
variation 305
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:752144423"
variation 307
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="g"
/db_xref="dbSNP:2034589850"
variation 307
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:533556852"
variation 308
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:182225698"
variation 311
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1221074967"
variation 313
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2123437587"
variation 314
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:1345807661"
variation 315
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1485164642"
variation 316
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:919289227"
variation 317
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:763429164"
variation 318
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:573531529"
variation 320
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:773719063"
variation 321
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1322253921"
variation 327
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:765659991"
variation 329..330
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="aa"
/db_xref="dbSNP:749625858"
variation 331
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:972113247"
variation 332
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034588402"
variation 334
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1315768974"
variation 342
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:971480358"
variation 345
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1026381485"
variation 350
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2123437423"
variation 356
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034587977"
variation 364
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:760430074"
variation 365
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:775263367"
variation 367
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1733145396"
variation 369
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:771654361"
variation 370
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:958917807"
variation 372
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1392449805"
variation 380
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1428518577"
variation 382
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:745365748"
variation 383
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:774407202"
variation 386
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1240649245"
variation 388
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034586881"
variation 390
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:770789152"
variation 391
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034586670"
variation 395
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:749156518"
variation 397
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1033273480"
variation 399
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034586352"
variation 400
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034586251"
variation 402
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2123437238"
variation 403
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034586145"
variation 404
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1279645287"
variation 412
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034585888"
exon 413..590
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/inference="alignment:Splign:2.1.0"
variation 416
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1309223162"
variation 420
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:2034569845"
variation 421
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034569737"
variation 423
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1384069257"
variation 429
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034569525"
variation 432
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:377177728"
variation 434
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:2034569275"
variation 438
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1353159026"
variation 440
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1803181"
variation 441
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:11539867"
variation 447
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:138359468"
variation 452
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:768771738"
variation 455
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:747217889"
variation 457
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1427081751"
variation 459
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:2034568501"
variation 463
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:780022177"
variation 466
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:994744738"
variation 468
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1252595304"
variation 470
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:373517431"
variation 471
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:540364911"
variation 473
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1036291223"
variation 474
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1223421103"
variation 481
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034567814"
variation 485
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:369627415"
variation 486
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:200700811"
variation 487
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:757754345"
variation 488
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2123435269"
variation 489
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1330633898"
variation 490
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:917291483"
variation 493
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:754271063"
variation 494
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:372312396"
variation 497
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034567227"
variation 498
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:759141938"
variation 504
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:372728601"
regulatory 518..523
/regulatory_class="polyA_signal_sequence"
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="hexamer: AATAAA"
variation 519
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/db_xref="dbSNP:1806861954"
variation 520
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1474338894"
variation 522
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="t"
/db_xref="dbSNP:1164561108"
variation 526
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034566821"
variation 527
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:1369112529"
variation 528
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:939429836"
variation 534
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:937457495"
variation 538
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1214030750"
variation 541
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:926130853"
polyA_site 545
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="major polyA site"
variation 548
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:554635248"
variation 550
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1401817304"
variation 551
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1300411736"
variation 552
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034566177"
variation 554..560
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="t"
/replace="taattct"
/db_xref="dbSNP:1353999352"
variation 556
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1601081670"
variation 558..560
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="t"
/replace="tct"
/db_xref="dbSNP:1281971190"
variation 562
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="a"
/db_xref="dbSNP:1292359789"
variation 563
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034565771"
variation 564
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034565702"
variation 566
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034565630"
regulatory 568..573
/regulatory_class="polyA_signal_sequence"
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="hexamer: AATAAA"
variation 573..577
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace=""
/replace="attat"
/db_xref="dbSNP:1340713037"
variation 573
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:2034565561"
variation 577
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:2034565408"
variation 578
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="g"
/replace="t"
/db_xref="dbSNP:2034565331"
variation 579
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="t"
/db_xref="dbSNP:1223134238"
variation 580
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="c"
/replace="g"
/db_xref="dbSNP:2034565183"
variation 583
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:928021688"
variation 586
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/replace="a"
/replace="g"
/db_xref="dbSNP:1258470622"
polyA_site 590
/gene="ATP5PF"
/gene_synonym="ATP5; ATP5A; ATP5J; ATPM; CF6; F6"
/note="major polyA site"
ORIGIN
ctgtttggcttctgtctcacctagacccgtccggtcgcagactgtctccgagacgcttcctgtccggtgagcgtcgaccgactgaaacggcggcccataatgcattgcgatggcggaatcagcatgattcttcagaggctcttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggtgttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaagattagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagagtatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagacatgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccccaggcctgaagaaataaagtaaaattaatctggtaatttgtcacggattagttgtacaactagttagaagtttcagaataaacatgcatttcataactgtcaaatgttcttttaattctgagtccaaataaattatttggtgatgttga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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