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Previous release (v1)
2024-04-28 01:43:28, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_000988 505 bp mRNA linear PRI 14-NOV-2023
DEFINITION Homo sapiens ribosomal protein L27 (RPL27), transcript variant 1,
mRNA.
ACCESSION NM_000988
VERSION NM_000988.5
KEYWORDS RefSeq; MANE Select.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 505)
AUTHORS Suo L, Gao M, Ma T and Gao Z.
TITLE Effect of RPL27 knockdown on the proliferation and apoptosis of
human liver cancer cells
JOURNAL Biochem Biophys Res Commun 682, 156-162 (2023)
PUBMED 37812860
REMARK GeneRIF: Effect of RPL27 knockdown on the proliferation and
apoptosis of human liver cancer cells.
REFERENCE 2 (bases 1 to 505)
AUTHORS Park SY, Seo D, Jeon EH, Park JY, Jang BC, Kim JI, Im SS, Lee JH,
Kim S, Cho CH and Lee YH.
TITLE RPL27 contributes to colorectal cancer proliferation and stemness
via PLK1 signaling
JOURNAL Int J Oncol 63 (2) (2023)
PUBMED 37387446
REMARK GeneRIF: RPL27 contributes to colorectal cancer proliferation and
stemness via PLK1 signaling.
REFERENCE 3 (bases 1 to 505)
AUTHORS Haenig C, Atias N, Taylor AK, Mazza A, Schaefer MH, Russ J,
Riechers SP, Jain S, Coughlin M, Fontaine JF, Freibaum BD,
Brusendorf L, Zenkner M, Porras P, Stroedicke M, Schnoegl S,
Arnsburg K, Boeddrich A, Pigazzini L, Heutink P, Taylor JP,
Kirstein J, Andrade-Navarro MA, Sharan R and Wanker EE.
TITLE Interactome Mapping Provides a Network of Neurodegenerative Disease
Proteins and Uncovers Widespread Protein Aggregation in Affected
Brains
JOURNAL Cell Rep 32 (7), 108050 (2020)
PUBMED 32814053
REFERENCE 4 (bases 1 to 505)
AUTHORS Liang X, Zuo MQ, Zhang Y, Li N, Ma C, Dong MQ and Gao N.
TITLE Structural snapshots of human pre-60S ribosomal particles before
and after nuclear export
JOURNAL Nat Commun 11 (1), 3542 (2020)
PUBMED 32669547
REMARK Publication Status: Online-Only
REFERENCE 5 (bases 1 to 505)
AUTHORS Zhang Y, You J, Wang X and Weber J.
TITLE The DHX33 RNA Helicase Promotes mRNA Translation Initiation
JOURNAL Mol Cell Biol 35 (17), 2918-2931 (2015)
PUBMED 26100019
REFERENCE 6 (bases 1 to 505)
AUTHORS Harshman K, Bell R, Rosenthal J, Katcher H, Miki Y, Swenson J,
Gholami Z, Frye C, Ding W, Dayananth P et al.
TITLE Comparison of the positional cloning methods used to isolate the
BRCA1 gene
JOURNAL Hum Mol Genet 4 (8), 1259-1266 (1995)
PUBMED 7581362
REFERENCE 7 (bases 1 to 505)
AUTHORS Kato S, Sekine S, Oh SW, Kim NS, Umezawa Y, Abe N,
Yokoyama-Kobayashi M and Aoki T.
TITLE Construction of a human full-length cDNA bank
JOURNAL Gene 150 (2), 243-250 (1994)
PUBMED 7821789
REFERENCE 8 (bases 1 to 505)
AUTHORS Miki Y, Swensen J, Shattuck-Eidens D, Futreal PA, Harshman K,
Tavtigian S, Liu Q, Cochran C, Bennett LM, Ding W et al.
TITLE A strong candidate for the breast and ovarian cancer susceptibility
gene BRCA1
JOURNAL Science 266 (5182), 66-71 (1994)
PUBMED 7545954
REFERENCE 9 (bases 1 to 505)
AUTHORS Gallagher RA, McClean PM and Malik AN.
TITLE Cloning and nucleotide sequence of a full length cDNA encoding
ribosomal protein L27 from human fetal kidney
JOURNAL Biochim Biophys Acta 1217 (3), 329-332 (1994)
PUBMED 8148381
REFERENCE 10 (bases 1 to 505)
AUTHORS Jones KW, Chevrette M, Shapero MH and Fournier RE.
TITLE Generation of region- and species-specific expressed gene probes
from somatic cell hybrids
JOURNAL Nat Genet 1 (4), 278-283 (1992)
PUBMED 1302024
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff in
collaboration with Francesco Amaldi. The reference sequence was
derived from AC055866.19.
This sequence is a reference standard in the RefSeqGene project.
On May 8, 2018 this sequence version replaced NM_000988.4.
Summary: Ribosomes, the organelles that catalyze protein synthesis,
consist of a small 40S subunit and a large 60S subunit. Together
these subunits are composed of four RNA species and approximately
80 structurally distinct proteins. This gene encodes a member of
the L27e family of ribosomal proteins and a component of the 60S
subunit. A splice site mutation in this gene has been identified in
a Diamond-Blackfan anemia (DBA) patient. As is typical for genes
encoding ribosomal proteins, there are multiple processed
pseudogenes of this gene dispersed through the genome. [provided by
RefSeq, Mar 2017].
Transcript Variant: This variant (1) encodes the protein. Variants
1-3 encode the same protein.
Sequence Note: The RefSeq transcript and protein were derived from
genomic sequence to make the sequence consistent with the reference
genome assembly. The genomic coordinates used for the transcript
record were based on alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BG618850.1, SRR1163657.220571.1
[ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA1965299, SAMEA1966682
[ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
MANE Ensembl match :: ENST00000253788.12/ ENSP00000253788.5
RefSeq Select criteria :: based on manual assertion, conservation,
longest protein
##RefSeq-Attributes-END##
COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-53 AC055866.19 182710-182762
54-136 AC055866.19 183040-183122
137-306 AC055866.19 184224-184393
307-417 AC055866.19 186964-187074
418-505 AC055866.19 187163-187250
FEATURES Location/Qualifiers
source 1..505
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="17"
/map="17q21.31"
gene 1..505
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/note="ribosomal protein L27"
/db_xref="GeneID:6155"
/db_xref="HGNC:HGNC:10328"
/db_xref="MIM:607526"
exon 1..53
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/inference="alignment:Splign:2.1.0"
variation 3
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1000185672"
variation 8
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050321520"
variation 9
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1033468332"
variation 10
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1446973371"
variation 11
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1354959777"
variation 12
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1597768923"
variation 13..18
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="ctt"
/replace="cttctt"
/db_xref="dbSNP:201231264"
variation 14
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:2050321715"
variation 15..17
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="tct"
/replace="tctct"
/db_xref="dbSNP:869200406"
variation 15
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:774786980"
variation 16
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:890850564"
variation 17..19
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="tt"
/replace="ttt"
/db_xref="dbSNP:1555569933"
variation 17
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050321877"
variation 19
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1445413601"
variation 20
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1387288412"
variation 21
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:145515343"
variation 28
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace=""
/replace="c"
/db_xref="dbSNP:1255247844"
variation 29
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace=""
/replace="t"
/db_xref="dbSNP:542792131"
variation 29
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2151964307"
variation 30..31
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace=""
/replace="gg"
/db_xref="dbSNP:2050322233"
variation 30..31
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="gg"
/db_xref="dbSNP:11305686"
variation 30
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:201144020"
variation 31..32
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace=""
/replace="gt"
/db_xref="dbSNP:2050322295"
variation 31
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050322263"
misc_feature 32..34
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/note="upstream in-frame stop codon"
variation 32
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1474497759"
variation 33
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace=""
/replace="a"
/db_xref="dbSNP:2050322407"
variation 33
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:538377203"
variation 34..36
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="gg"
/replace="ggg"
/db_xref="dbSNP:2050322466"
variation 34
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:2050322425"
variation 36
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:9899458"
variation 37
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:950748325"
variation 38..39
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace=""
/replace="t"
/db_xref="dbSNP:2050322666"
variation 38
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:578236915"
variation 39
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1439889683"
variation 40
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:545276486"
variation 41
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:560698130"
variation 43
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1303739710"
variation 47
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:2050322843"
variation 48
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:572667986"
variation 50
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:58834964"
variation 50
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="gg"
/db_xref="dbSNP:2050322969"
variation 51
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:913824221"
variation 52
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1940487923"
variation 53
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:954504806"
exon 54..136
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/inference="alignment:Splign:2.1.0"
variation 54
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050326737"
CDS 56..466
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/EC_number="3.6.5.3"
/note="60S ribosomal protein L27"
/codon_start=1
/product="large ribosomal subunit protein eL27"
/protein_id="NP_000979.1"
/db_xref="CCDS:CCDS11449.1"
/db_xref="GeneID:6155"
/db_xref="HGNC:HGNC:10328"
/db_xref="MIM:607526"
/translation="
MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF"
misc_feature 56..463
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/note="an acronym for the authors' surnames (Kyrpides,
Ouzounis and Woese); Region: KOW; cl00354"
/db_xref="CDD:444860"
misc_feature order(74..100,107..109,119..142,179..196,209..217,
221..223,230..238,254..256)
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/note="RNA binding site [nucleotide binding]; other site"
/db_xref="CDD:240514"
misc_feature 134..136
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/note="N6-acetyllysine.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (P61353.2); acetylation site"
misc_feature 332..334
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/note="N6-acetyllysine.
/evidence=ECO:0007744|PubMed:19608861; propagated from
UniProtKB/Swiss-Prot (P61353.2); acetylation site"
variation 63
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050326768"
variation 68
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:2050326806"
variation 70
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050326842"
variation 74
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050326890"
variation 77
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:776825853"
variation 88
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:149080883"
variation 92
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:1289898955"
variation 94
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:770107343"
variation 95
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:2050327081"
variation 96
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="t"
/db_xref="dbSNP:143145441"
variation 98
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:376971321"
variation 104
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:764058005"
variation 106
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1804328"
variation 107
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050327298"
variation 108
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:116316268"
variation 109
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1285078333"
variation 111
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:1195159309"
variation 113
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1481595913"
variation 114
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2151964508"
variation 117
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:761868372"
variation 118
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:766933649"
variation 122
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:749989076"
variation 128
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="t"
/db_xref="dbSNP:766040122"
variation 130
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:148271218"
exon 137..306
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/inference="alignment:Splign:2.1.0"
variation 142
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1407065357"
variation 144
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:747996454"
variation 145
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:771862469"
variation 147
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050341359"
variation 150
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:773204386"
variation 151
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1045565682"
variation 154
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050341473"
variation 157
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:769123617"
variation 158
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:2050341559"
variation 161
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:781041828"
variation 162
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:776186138"
variation 163
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050341707"
variation 164
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:2151965092"
variation 166
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:764895552"
variation 168
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:373965153"
variation 172
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:762245844"
variation 175
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:767856445"
variation 176
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:2050341924"
variation 177
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:2050341957"
variation 179
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:368450548"
variation 183
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:756752985"
variation 184
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1237695633"
variation 186
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:2050342122"
variation 191
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:780252530"
variation 196
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:552420292"
variation 197
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1156831484"
variation 198
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:754021880"
variation 199
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050342363"
variation 201
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1384721873"
variation 203
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:755200445"
variation 206
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:779224984"
variation 207
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1304020778"
variation 210
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1422169310"
variation 222
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:565340960"
variation 223
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:371917151"
variation 224
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:771913894"
variation 230..239
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="aagaaga"
/replace="aagaagaaga"
/db_xref="dbSNP:771273047"
variation 235
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:11538131"
variation 237
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:770892999"
variation 238
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:759081615"
variation 241
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:769371961"
variation 242
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:775226187"
variation 246
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1567737854"
variation 253
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1011262801"
variation 255
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:1378296304"
variation 258
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1597770686"
variation 264
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:762571548"
variation 266
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1247139254"
variation 267
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="t"
/db_xref="dbSNP:375025835"
variation 268
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1356766660"
variation 271
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:750795514"
variation 272
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1252658792"
variation 274
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2151965150"
variation 277
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1209712853"
variation 279
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:747760845"
variation 281
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050343620"
variation 285
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:761243752"
variation 287
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="t"
/db_xref="dbSNP:1268273517"
variation 288
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1175460441"
variation 292
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:767014631"
variation 295
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050343809"
variation 299
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1020517623"
variation 300
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:1567737914"
variation 304
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:113036777"
exon 307..417
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/inference="alignment:Splign:2.1.0"
variation 309
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1423049747"
variation 313
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1420459977"
variation 316
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050377720"
variation 319..321
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="tat"
/replace="tattat"
/db_xref="dbSNP:2050377759"
variation 320
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1189541438"
variation 321
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2151966289"
variation 323
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:199713340"
variation 324
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:376827420"
variation 325
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:544770646"
variation 326
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:766924583"
variation 329
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:2050378016"
variation 331
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050378048"
variation 335
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:777290039"
variation 336
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:1567739202"
variation 337
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:760178247"
variation 338
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:765351338"
variation 340
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:752755283"
variation 341
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:753830462"
variation 345
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:976153783"
variation 352
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1360778930"
variation 354
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:764241143"
variation 356
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:2050378434"
variation 357
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050378470"
variation 358
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:144939879"
variation 359
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1567739239"
variation 365
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:191256004"
variation 366
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1203028295"
variation 367
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050378675"
variation 369
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1052516238"
variation 371
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:931971715"
variation 373
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1261158093"
variation 374
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1597773044"
variation 377
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:138826063"
variation 378
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:533615868"
variation 380
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050378994"
variation 385
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1242939580"
variation 386
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:2050379072"
variation 387
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:368506285"
variation 389
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:774149621"
variation 390
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:747319203"
variation 391
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:142006401"
variation 392..397
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="gaggcc"
/replace="gaggccgaggcc"
/db_xref="dbSNP:2050379261"
variation 397
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1176387199"
variation 400
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1427764880"
variation 402
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="t"
/db_xref="dbSNP:777199664"
variation 403
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="g"
/db_xref="dbSNP:760084490"
variation 404
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:1175285462"
variation 407
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050379518"
variation 408
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:372454661"
variation 409
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:775586874"
variation 414
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:762950023"
variation 415
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050379647"
variation 416
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:1419088568"
exon 418..505
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/inference="alignment:Splign:2.1.0"
variation 419
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:201969823"
variation 421
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:531503727"
variation 428
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:1247844188"
variation 429
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="g"
/replace="t"
/db_xref="dbSNP:1402434667"
variation 430
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:1294246436"
variation 432
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:762000722"
variation 433
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1221844469"
variation 435
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050381293"
variation 445
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1265436384"
variation 448
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1439617239"
variation 454
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050381460"
variation 455
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:1372663547"
variation 457
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1804329"
variation 458
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:146328911"
variation 459
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:760389648"
variation 460
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:369125440"
variation 463
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:753705175"
variation 467
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:755008755"
variation 472
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050381790"
variation 477
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="c"
/replace="t"
/db_xref="dbSNP:2050381822"
variation 481
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="t"
/db_xref="dbSNP:979078268"
regulatory 483..488
/regulatory_class="polyA_signal_sequence"
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/note="hexamer: ATTAAA"
variation 489
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:201223440"
variation 490
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/db_xref="dbSNP:199869182"
variation 491
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:925310997"
variation 493..499
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="ataaaga"
/db_xref="dbSNP:776719048"
variation 493
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:758073004"
variation 494
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1567739439"
variation 495..501
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="aaa"
/replace="aaagaaa"
/db_xref="dbSNP:761897795"
variation 495
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050382138"
variation 498
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1555570473"
variation 499..505
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="aaaa"
/replace="aaaaaa"
/replace="aaaaaaa"
/db_xref="dbSNP:765073347"
variation 499
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1333857275"
variation 500
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:1454389562"
variation 502
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:2050382352"
variation 504
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="g"
/db_xref="dbSNP:777596481"
polyA_site 505
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/note="major polyA site"
variation 505
/gene="RPL27"
/gene_synonym="DBA16; eL27; L27"
/replace="a"
/replace="t"
/db_xref="dbSNP:1381758157"
ORIGIN
agcggaagtgtccttctttcctttttgctggtagggccgggtggttgctgccgaaatgggcaagttcatgaaacctgggaaggtggtgcttgtcctggctggacgctactccggacgcaaagctgtcatcgtgaagaacattgatgatggcacctcagatcgcccctacagccatgctctggtggctggaattgaccgctacccccgcaaagtgacagctgccatgggcaagaagaagatcgccaagagatcaaagataaaatcttttgtgaaagtgtataactacaatcacctaatgcccacaaggtactctgtggatatccccttggacaaaactgtcgtcaataaggatgtcttcagagatcctgctcttaaacgcaaggcccgacgggaggccaaggtcaagtttgaagagagatacaagacaggcaagaacaagtggttcttccagaaactgcggttttagatgctttgttttgatcattaaaaattataaagaaaaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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