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2024-04-25 09:09:03, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Homo sapiens chorionic gonadotropin subunit beta 8 (CGB8), mRNA. (887 bp)
gactagtccctagcactcgacgactgagtctctgaggtcacttcaccgtggtctccgcctcacccttggcgctggaccagtgagaggagagggctggggcgctccgctgagccactcctgcgcccccctggccttgtctacctcttgccccccgaagggttagtgtcgagctcactccagcatcctacaacctcctggtggccttgccgcccccacaaccccgaggtttaaagccaggtacacgaggcaggggacacaccaaggatggagatgttccaggggctgctgctgttgctgctgctgagcatgggcgggacatgggcatccaaggagccgcttcggccacggtgccgccccatcaatgccaccctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgacccgcgtgctgcagggggtcctgccggccctgcctcaggtggtgtgcaactaccgcgatgtgcgcttcgagtccatccggctccctggctgcccgcgcggcgtgaaccccgtggtctcctacgccgtggctctcagctgtcaatgtgcactc...
position 397
NM_033183.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens luteinizing hormone subunit beta (LHB), mRNA. (524 bp)
REFERENCE 10 (bases 1 to 524) AUTHORS Sairam,M.R. and Li,C.H. TITLE Human pituitary lutropin. Isolation, properties, and the complete amino acid sequence of the beta-subunit JOURNAL Biochim Biophys Acta 412 (1), 70-81 (1975) PUBMED 1191677 tgcaccaaggatggagatgctccaggggctgctgctgttgctgctgctgagcatgggcggggcatgggcatccagggagccgcttcggccatggtgccaccccatcaatgccatcctggctgtcgagaaggagggctgcccagtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgatgcgcgtgctgcaggcggtcctgccgcccctgcctcaggtggtgtgcacctaccgtgatgtgcgcttcgagtccatccggctccctggctgcccgcgtggtgtggaccccgtggtctccttccctgtggctctcagctgtcgctgtggaccctgccgccgcagcac...
position 35
Synonym: CGB4; HH23; LSH-B; LSH-beta
NM_000894.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chorionic gonadotropin subunit beta 5 (CGB5), mRNA. (877 bp)
gactagtccctagcactcgacgactgagtctctgagatcacttcaccgtggtctccgcctcacccttggcgctggaccagtgagaggagagggctggggcgctccgctgagccactcctgcgcccccctggccttgtctacctcttgccccccgaagggttagtgtcgagctcaccccagcatcctacaacctcctggtggccttgccgcccccacaaccccgaggtataaagccaggtacacgaggcaggggacgcaccaaggatggagatgttccaggggctgctgctgttgctgctgctgagcatgggcgggacatgggcatccaaggagccgcttcggccacggtgccgccccatcaatgccaccctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgacccgcgtgctgcagggggtcctgccggccctgcctcaggtggtgtgcaactaccgcgatgtgcgcttcgagtccatccggctccctggctgcccgcgcggcgtgaaccccgtggtctcctacgccgtggctctcagctgtcaatgtgcactc...
position 387
Synonym: CGB; HCG; hCGB
NM_033043.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chorionic gonadotropin subunit beta 1 (CGB1), transcript variant 1, mRNA. (693 bp)
by multiple genes JOURNAL J Biol Chem 258 (19), 11492-11499 (1983) PUBMED 6194155 ctggagggaggaaggggaactgcatctgagagagagcagccaattgggtccgctgactctggccaggttcccgtgccgcgtccaacacccctcactccctgtctcactcccccacggagactcaatttactttccatgtccacattcccagtgcttgcggaagatatcccgctaagagagagacatgtcaaagaggctgctgctgttgctgctgctgagcatgggcgggacatgggcatccaaggagccgcttcggccacggtgccgccccatcaatgccaccctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgacccgcgtgctgcagggggtcctgccggccctgcctcaggtggtgtgcaactaccgcgatgtgcgcttcgagtccatccggctccctggctgcccgcgcggcgtgaaccccgtggtctcctacgccgtggctctcagctgtcaatgtgcactctgcc...
position 203
NM_033377.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chorionic gonadotropin subunit beta 2 (CGB2), transcript variant 1, mRNA. (715 bp)
hormone JOURNAL DNA 2 (4), 281-289 (1983) PUBMED 6319099 gccctgcgttccgtggcgccccctggagggaggaaggggaactgtatctgagagagagcagccaattgggtccgctgactccggccgggttcccgtgccgcgtccaacacccctcactccctgtctcactcccccacggagactcaatttactttccatgtccacatccccagtgcttgcggaagatatcccgctaagagagagacatgtcaaaggggctgctgctgttgctgctgctgagcatgggcgggacatgggcatccaaggagccgcttcggccacggtgccgccccatcaatgccaccctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgacccgcgtgctgcagggggtcctgccggccctgcctcaggtggtgtgcaactaccgcgatgtgcgcttcgagtccatccggctccctggctgcccgcgcggcgtgaaccccgtggtctcctacgccgtggctctcagctgtcaatgtgcactctgccgcc...
position 225
NM_033378.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chorionic gonadotropin subunit beta 1 (CGB1), transcript variant 2, mRNA. (870 bp)
tcactccctgtctcactcccccacggagactcaatttactttccatgtccacattcccagtgcttgcggaagatatcccgctaagagagagacatgtcaaaggtagggtagatccacatttccgggcaccaaagatggagatgttccaggaaagactgcagggcccctgggcaccttccacctccttccaggccatcactggcatgagaaggggcagacccgtgtgagctgtggaaggaggcctctttctggaggagcgtgacccccagtaagcttcagaggctgctgctgttgctgctgctgagcatgggcgggacatgggcatccaaggagccgcttcggccacggtgccgccccatcaatgccaccctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgacccgcgtgctgcagggggtcctgccggccctgcctcaggtggtgtgcaactaccgcgatgtgcgcttcgagtccatccggctccctggctgcccgcgcggcgtgaaccccgtggtctcctacgccgtggctctcagctgtcaatgtgcactc...
position 380
NM_001382421.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chorionic gonadotropin subunit beta 3 (CGB3), mRNA. (877 bp)
gactagtccctagcactcgacgactgagtctctgaggtcacttcaccgtggtctccgcctcacccttggcgctggaccagtgagaggagagggctggggcgctccgctgagccactcctgcgcccccctggccttgtctacctcttgccccccgaggggttagtgtcgagctcaccccagcatcctatcacctcctggtggccttgccgcccccacaaccccgaggtataaagccaggtacacgaggcaggggacgcaccaaggatggagatgttccaggggctgctgctgttgctgctgctgagcatgggcgggacatgggcatccaaggagccgcttcggccacggtgccgccccatcaatgccaccctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgacccgcgtgctgcagggggtcctgccggccctgcctcaggtggtgtgcaactaccgcgatgtgcgcttcgagtccatccggctccctggctgcccgcgcggcgtgaaccccgtggtctcctacgccgtggctctcagctgtcaatgtgcactc...
position 387
Synonym: CGB; CGB5; CGB7; CGB8; hCGB; LHB
NM_000737.5 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chorionic gonadotropin subunit beta 2 (CGB2), transcript variant 2, mRNA. (881 bp)
tccaacacccctcactccctgtctcactcccccacggagactcaatttactttccatgtccacatccccagtgcttgcggaagatatcccgctaagagagagacatgtcaaaggtagggtagatcgacatttccaggcaccaaagatggagatgttccaggaaagactgcagggcccctgggcaccttccacctgcttccaggccatcactggcatgagaaggggcagaccagtgtgagctgtggaaggaggcctctttctggaggagcgtgacccccagggctgctgctgttgctgctgctgagcatgggcgggacatgggcatccaaggagccgcttcggccacggtgccgccccatcaatgccaccctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgacccgcgtgctgcagggggtcctgccggccctgcctcaggtggtgtgcaactaccgcgatgtgcgcttcgagtccatccggctccctggctgcccgcgcggcgtgaaccccgtggtctcctacgccgtggctctcagctgtcaatgtgcactc...
position 391
NM_001319065.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chorionic gonadotropin subunit beta 7 (CGB7), transcript variant 2, mRNA. (1948 bp)
gactagtccctagcactcgacgactgagtctcagaggtcacttcaccgtggtctccgcctcatccttggcgctagaccactgaggggagaggactggggtgctccgctgagccactcctgtgcctccctggccttgtctacttctcgccccccgaagggttagtgtccagctcactccagcatcctacaacctcctggtggccttgacgcccccacaaacccgaggtataaagccaggtacaccaggcaggggacgcaccaaggatggagatgttccaggggctgctgctgttgctgctgctgagcatgggcgggacatgggcatccagggagatgcttcggccacggtgccgccccatcaatgccaccctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgacccgcgtgctgcagggggtcctgccggccctgcctcaggtggtgtgcaactaccgcgatgtgcgcttcgagtccatccggctccctggctgcccgcgcggcgtgaaccccgtggtctcctacgccgtggctctcagctgtcaatgtgcactc...
position 1458
Synonym: CG-beta-a; CGB6
NM_033142.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chorionic gonadotropin subunit beta 7 (CGB7), transcript variant 1, mRNA. (2151 bp)
gactagtccctagcactcgacgactgagtctcagaggtcacttcaccgtggtctccgcctcatccttggcgctagaccactgaggggagaggactggggtgctccgctgagccactcctgtgcctccctggccttgtctacttctcgccccccgaagggttagtgtccagctcactccagcatcctacaacctcctggtggccttgacgcccccacaaacccgaggtataaagccaggtacaccaggcaggggacgcaccaaggatggagatgttccaggggctgctgctgttgctgctgctgagcatgggcgggacatgggcatccagggagatgcttcggccacggtgccgccccatcaatgccaccctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgacccgcgtgctgcagggggtcctgccggccctgcctcaggtggtgtgcaactaccgcgatgtgcgcttcgagtccatccggctccctggctgcccgcgcggcgtgaaccccgtggtctcctacgccgtggctctcagctgtcaatgtgcactc...
position 1661
Synonym: CG-beta-a; CGB6
NM_001385261.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens luteinizing hormone subunit beta (LHB), transcript variant X1, mRNA. (3283 bp)
tgtgagctgtggaaggaggcctctttctggaggggcatgacccccagtaagcttcaggtggggcagttcctgagggtggggatctgaaatgttggggcatctcaggtcctctgggctgtggggtgggctctgaaaggcaggtgtccgggtggtgggtcctgaataggagatgccgggaagggtctctgggtctttgtgggtggtgtaccacgcgggatgggaaggccaggactcggggctgcggtctcagacctgggtgaagcagtgtccttgtcccaggggctgctgctgttgctgctgctgagcatgggcggggcatgggcatccagggagccgcttcggccatggtgccaccccatcaatgccatcctggctgtcgagaaggagggctgcccagtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgatgcgcgtgctgcaggcggtcctgccgcccctgcctcaggtggtgtgcacctaccgtgatgtgcgcttcgagtccatccggctccctggctgcccgcgtggtgtggaccccgtggtctccttccctgtggctctcagctgtcgctgtggaccc...
position 2794
Synonym: CGB4; HH23; LSH-B; LSH-beta
XM_047438832.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens luteinizing hormone subunit beta (LHB), transcript variant X1, mRNA. (3285 bp)
tgtgagctgtggaaggaggcctctttctggaggggcatgacccccagtaagcttcaggtggggcagttcctgagggtggggatctgaaatgttggggcatctcaggtcctctgggctgtggggtgggctctgaaaggcaggtgtccgggtggtgggtcctgaataggagatgccaggaagggtctctgggtctttgtgggtggtgtaccacgcgggatgggaaggccaggactcggggctgcggtctcagacccgggtgaagcagtgtccttgtcccaggggctgctgctgttgctgctgctgagcatgggcggggcatgggcatccagggagccgcttcggccatggtgccaccccatcaatgccatcctggctgtggagaaggagggctgccccgtgtgcatcaccgtcaacaccaccatctgtgccggctactgccccaccatgatgcgcgtgctgcaggcggtcctgccgcccctgcctcaggtggtgtgcacctaccgtgatgtgcgcttcgagtccatccggctccctggctgcccgcgtggcgtggaccccgtggtctccttccctgtggctctcagctgtcgctgtggaccc...
position 2796
Synonym: CGB4; HH23; LSH-B; LSH-beta
XM_054321018.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

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Debug Info:

Redirect URI : http://ggrna.dbcls.jp/hs/seq%3aCTGTTGCTGCTGCTGAGCATGGGCG
lang : en | div : | spe : hs | query_string : seq:CTGTTGCTGCTGCTGAGCATGGGCG | format : html | download : 

0.000 | 0.000 | search_start;
0.085 | 0.085 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:CTGTTGCTGCTGCTGAGCATGGGCG)?source=Homo sapiens (human)?to=0&format=json
0.177 | 0.092 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:CTGTTGCTGCTGCTGAGCATGGGCG)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.179 | 0.002 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]