GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2021-04-23 22:18:46, GGRNA : RefSeq release 205 (Mar, 2021)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Homo sapiens gamma-glutamyltransferase 1 (GGT1), transcript variant 3, mRNA. (2354 bp)
agcgggatcctgttcaataatgaaatggacgacttcagctctcccagcatcaccaacgagtttggggtacccccctcacctgccaatttcatccagccagggaagcagccgctctcgtccatgtgcccgacgatcatggtgggccaggacggccaggtccggatggtggtgggagctgctgggggcacacagatcaccacggccactgcactggccatcatctacaacctctggttcggctatgacgtgaagcgggccgtggaggagccccggctgcacaaccagcttctgcccaacgtcacgacagtggagagaaacattgaccaggcagtgactgcagccctggagacccggcaccatcacacccagatcgcgtccaccttcatcgctgtggtgcaagccatcgtccgcacggctggtggctgggcagctgcctcggactccaggaaaggcggggagcctgccggctactgagtgctccaggaggacaaggctgacaagcaatccagggacaagatactcaccaggaccaggaaggggactctgggggaccggcttcccctgtgagcagcagagcagcacaataaatgaggccactgt...
position 1744 1764 1852 1941 2011 2045 2106 2152 2188 2232 2279
Synonym: CD224; D22S672; D22S732; GGT; GGT 1; GGTD; GTG
NM_013430.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens gamma-glutamyltransferase 1 (GGT1), transcript variant 2, mRNA. (2558 bp)
agcgggatcctgttcaataatgaaatggacgacttcagctctcccagcatcaccaacgagtttggggtacccccctcacctgccaatttcatccagccagggaagcagccgctctcgtccatgtgcccgacgatcatggtgggccaggacggccaggtccggatggtggtgggagctgctgggggcacacagatcaccacggccactgcactggccatcatctacaacctctggttcggctatgacgtgaagcgggccgtggaggagccccggctgcacaaccagcttctgcccaacgtcacgacagtggagagaaacattgaccaggcagtgactgcagccctggagacccggcaccatcacacccagatcgcgtccaccttcatcgctgtggtgcaagccatcgtccgcacggctggtggctgggcagctgcctcggactccaggaaaggcggggagcctgccggctactgagtgctccaggaggacaaggctgacaagcaatccagggacaagatactcaccaggaccaggaaggggactctgggggaccggcttcccctgtgagcagcagagcagcacaataaatgaggccactgt...
position 1948 1968 2056 2145 2215 2249 2310 2356 2392 2436 2483
Synonym: CD224; D22S672; D22S732; GGT; GGT 1; GGTD; GTG
NM_013421.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens gamma-glutamyltransferase 1 (GGT1), transcript variant 6, mRNA. (2630 bp)
agcgggatcctgttcaataatgaaatggacgacttcagctctcccagcatcaccaacgagtttggggtacccccctcacctgccaatttcatccagccagggaagcagccgctctcgtccatgtgcccgacgatcatggtgggccaggacggccaggtccggatggtggtgggagctgctgggggcacacagatcaccacggccactgcactggccatcatctacaacctctggttcggctatgacgtgaagcgggccgtggaggagccccggctgcacaaccagcttctgcccaacgtcacgacagtggagagaaacattgaccaggcagtgactgcagccctggagacccggcaccatcacacccagatcgcgtccaccttcatcgctgtggtgcaagccatcgtccgcacggctggtggctgggcagctgcctcggactccaggaaaggcggggagcctgccggctactgagtgctccaggaggacaaggctgacaagcaatccagggacaagatactcaccaggaccaggaaggggactctgggggaccggcttcccctgtgagcagcagagcagcacaataaatgaggccactgt...
position 2020 2040 2128 2217 2287 2321 2382 2428 2464 2508 2555
Synonym: CD224; D22S672; D22S732; GGT; GGT 1; GGTD; GTG
NM_001288833.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/hs/209919_x_at
lang : en | div : | spe : hs | query_string : 209919_x_at | format : html | download :

0.000 | 0.000 | search_start;
0.084 | 0.084 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TGAAATGGACGACTTCAGCTCTCCC)?source=Homo sapiens (human)?to=0&format=json
0.094 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TCTGCCCAACGTCACGACAGTGGAG)?source=Homo sapiens (human)?to=0&format=json
0.103 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TCATCTACAACCTCTGGTTCGGCTA)?source=Homo sapiens (human)?to=0&format=json
0.112 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TCATCGCTGTGGTGCAAGCCATCGT)?source=Homo sapiens (human)?to=0&format=json
0.122 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GGGACAAGATACTCACCAGGACCAG)?source=Homo sapiens (human)?to=0&format=json
0.129 | 0.007 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GACGATCATGGTGGGCCAGGACGGC)?source=Homo sapiens (human)?to=0&format=json
0.137 | 0.008 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GACCAGGCAGTGACTGCAGCCCTGG)?source=Homo sapiens (human)?to=0&format=json
0.257 | 0.120 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CTTCCCCTGTGAGCAGCAGAGCAGC)?source=Homo sapiens (human)?to=0&format=json
0.263 | 0.006 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CTCCCAGCATCACCAACGAGTTTGG)?source=Homo sapiens (human)?to=0&format=json
0.307 | 0.043 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CGGCTACTGAGTGCTCCAGGAGGAC)?source=Homo sapiens (human)?to=0&format=json
0.468 | 0.161 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:AGCTGCCTCGGACTCCAGGAAAGGC)?source=Homo sapiens (human)?to=0&format=json
0.539 | 0.072 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TGAAATGGACGACTTCAGCTCTCCC)%26(nt:TCTGCCCAACGTCACGACAGTGGAG)%26(nt:TCATCTACAACCTCTGGTTCGGCTA)%26(nt:TCATCGCTGTGGTGCAAGCCATCGT)%26(nt:GGGACAAGATACTCACCAGGACCAG)%26(nt:GACGATCATGGTGGGCCAGGACGGC)%26(nt:GACCAGGCAGTGACTGCAGCCCTGG)%26(nt:CTTCCCCTGTGAGCAGCAGAGCAGC)%26(nt:CTCCCAGCATCACCAACGAGTTTGG)%26(nt:CGGCTACTGAGTGCTCCAGGAGGAC)%26(nt:AGCTGCCTCGGACTCCAGGAAAGGC)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.542 | 0.002 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]