ver.2
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Previous release (v1)
2021-01-24 05:30:09, GGRNA : RefSeq release 203 (Nov, 2020)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
aatataactgccttaaaactttaatcccacttgcccctgttacctaattagagcagatgacccctcccctaatgcctgcggagttgtgcacgtagtagggtcaggccacggcagcctaccggcaatttccggccaacagttaaatgagaacatgaaaacagaaaacggttaaaactgtccctttctgtgtgaagatcacgttccttcccccgcaatgtgcccccagacgcacgtgggtcttcagggggccaggtgcacagacgtccctccacgttcacccctccacccttggactttcttttcgccgtggctgcggcacccttgcgcttttgctggtcactgccatggaggcacacagctgcagagacagagaggacgtgggcggcagagaggactgttgacatccaagcttcctttgtttttttttcctgtccttctctcacctcctaaagtagacttcatttttcctaacaggattagacagtcaaggagtggcttactacatgtgggagcttttggtatgtgacatgcgggctgggcagctgttagagtccaacgtggggcagcacagagagggggccacctccccaggccgtggct...
position 599 633 656 683 754 909 943 960 1002 1085 1115
aatataactgccttaaaactttaatcccacttgcccctgttacctaattagagcagatgacccctcccctaatgcctgcggagttgtgcacgtagtagggtcaggccacggcagcctaccggcaatttccggccaacagttaaatgagaacatgaaaacagaaaacggttaaaactgtccctttctgtgtgaagatcacgttccttcccccgcaatgtgcccccagacgcacgtgggtcttcagggggccaggtgcacagacgtccctccacgttcacccctccacccttggactttcttttcgccgtggctgcggcacccttgcgcttttgctggtcactgccatggaggcacacagctgcagagacagagaggacgtgggcggcagagaggactgttgacatccaagcttcctttgtttttttttcctgtccttctctcacctcctaaagtagacttcatttttcctaacaggattagacagtcaaggagtggcttactacatgtgggagcttttggtatgtgacatgcgggctgggcagctgttagagtccaacgtggggcagcacagagagggggccacctccccaggccgtggct...
position 632 666 689 716 787 942 976 993 1035 1118 1148
aatataactgccttaaaactttaatcccacttgcccctgttacctaattagagcagatgacccctcccctaatgcctgcggagttgtgcacgtagtagggtcaggccacggcagcctaccggcaatttccggccaacagttaaatgagaacatgaaaacagaaaacggttaaaactgtccctttctgtgtgaagatcacgttccttcccccgcaatgtgcccccagacgcacgtgggtcttcagggggccaggtgcacagacgtccctccacgttcacccctccacccttggactttcttttcgccgtggctgcggcacccttgcgcttttgctggtcactgccatggaggcacacagctgcagagacagagaggacgtgggcggcagagaggactgttgacatccaagcttcctttgtttttttttcctgtccttctctcacctcctaaagtagacttcatttttcctaacaggattagacagtcaaggagtggcttactacatgtgggagcttttggtatgtgacatgcgggctgggcagctgttagagtccaacgtggggcagcacagagagggggccacctccccaggccgtggct...
position 677 711 734 761 832 987 1021 1038 1080 1163 1193
aatataactgccttaaaactttaatcccacttgcccctgttacctaattagagcagatgacccctcccctaatgcctgcggagttgtgcacgtagtagggtcaggccacggcagcctaccggcaatttccggccaacagttaaatgagaacatgaaaacagaaaacggttaaaactgtccctttctgtgtgaagatcacgttccttcccccgcaatgtgcccccagacgcacgtgggtcttcagggggccaggtgcacagacgtccctccacgttcacccctccacccttggactttcttttcgccgtggctgcggcacccttgcgcttttgctggtcactgccatggaggcacacagctgcagagacagagaggacgtgggcggcagagaggactgttgacatccaagcttcctttgtttttttttcctgtccttctctcacctcctaaagtagacttcatttttcctaacaggattagacagtcaaggagtggcttactacatgtgggagcttttggtatgtgacatgcgggctgggcagctgttagagtccaacgtggggcagcacagagagggggccacctccccaggccgtggct...
position 710 744 767 794 865 1020 1054 1071 1113 1196 1226
aatataactgccttaaaactttaatcccacttgcccctgttacctaattagagcagatgacccctcccctaatgcctgcggagttgtgcacgtagtagggtcaggccacggcagcctaccggcaatttccggccaacagttaaatgagaacatgaaaacagaaaacggttaaaactgtccctttctgtgtgaagatcacgttccttcccccgcaatgtgcccccagacgcacgtgggtcttcagggggccaggtgcacagacgtccctccacgttcacccctccacccttggactttcttttcgccgtggctgcggcacccttgcgcttttgctggtcactgccatggaggcacacagctgcagagacagagaggacgtgggcggcagagaggactgttgacatccaagcttcctttgtttttttttcctgtccttctctcacctcctaaagtagacttcatttttcctaacaggattagacagtcaaggagtggcttactacatgtgggagcttttggtatgtgacatgcgggctgggcagctgttagagtccaacgtggggcagcacagagagggggccacctccccaggccgtggct...
position 890 924 947 974 1045 1200 1234 1251 1293 1376 1406
aatataactgccttaaaactttaatcccacttgcccctgttacctaattagagcagatgacccctcccctaatgcctgcggagttgtgcacgtagtagggtcaggccacggcagcctaccggcaatttccggccaacagttaaatgagaacatgaaaacagaaaacggttaaaactgtccctttctgtgtgaagatcacgttccttcccccgcaatgtgcccccagacgcacgtgggtcttcagggggccaggtgcacagacgtccctccacgttcacccctccacccttggactttcttttcgccgtggctgcggcacccttgcgcttttgctggtcactgccatggaggcacacagctgcagagacagagaggacgtgggcggcagagaggactgttgacatccaagcttcctttgtttttttttcctgtccttctctcacctcctaaagtagacttcatttttcctaacaggattagacagtcaaggagtggcttactacatgtgggagcttttggtatgtgacatgcgggctgggcagctgttagagtccaacgtggggcagcacagagagggggccacctccccaggccgtggct...
position 923 957 980 1007 1078 1233 1267 1284 1326 1409 1439
aatataactgccttaaaactttaatcccacttgcccctgttacctaattagagcagatgacccctcccctaatgcctgcggagttgtgcacgtagtagggtcaggccacggcagcctaccggcaatttccggccaacagttaaatgagaacatgaaaacagaaaacggttaaaactgtccctttctgtgtgaagatcacgttccttcccccgcaatgtgcccccagacgcacgtgggtcttcagggggccaggtgcacagacgtccctccacgttcacccctccacccttggactttcttttcgccgtggctgcggcacccttgcgcttttgctggtcactgccatggaggcacacagctgcagagacagagaggacgtgggcggcagagaggactgttgacatccaagcttcctttgtttttttttcctgtccttctctcacctcctaaagtagacttcatttttcctaacaggattagacagtcaaggagtggcttactacatgtgggagcttttggtatgtgacatgcgggctgggcagctgttagagtccaacgtggggcagcacagagagggggccacctccccaggccgtggct...
position 1213 1247 1270 1297 1368 1523 1557 1574 1616 1699 1729
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : http://ggrna.dbcls.jp/hs/207323_s_at
lang : en |
div : |
spe : hs |
query_string : 207323_s_at |
format : html |
download :
0.000 | 0.000 | search_start;
0.108 | 0.108 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TTGCCCCTGTTACCTAATTAGAGCA)?source=Homo sapiens (human)?to=0&format=json
0.120 | 0.012 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TGTGTGAAGATCACGTTCCTTCCCC)?source=Homo sapiens (human)?to=0&format=json
0.131 | 0.011 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TGGTATGTGACATGCGGGCTGGGCA)?source=Homo sapiens (human)?to=0&format=json
0.141 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TGCCATGGAGGCACACAGCTGCAGA)?source=Homo sapiens (human)?to=0&format=json
0.153 | 0.012 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TCCCCTAATGCCTGCGGAGTTGTGC)?source=Homo sapiens (human)?to=0&format=json
0.163 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TAGAGTCCAACGTGGGGCAGCACAG)?source=Homo sapiens (human)?to=0&format=json
0.173 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GGACTGTTGACATCCAAGCTTCCTT)?source=Homo sapiens (human)?to=0&format=json
0.184 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GCACGTAGTAGGGTCAGGCCACGGC)?source=Homo sapiens (human)?to=0&format=json
0.194 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GACGTGGGCGGCAGAGAGGACTGTT)?source=Homo sapiens (human)?to=0&format=json
0.204 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CTTCTCTCACCTCCTAAAGTAGACT)?source=Homo sapiens (human)?to=0&format=json
0.214 | 0.011 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CCTACCGGCAATTTCCGGCCAACAG)?source=Homo sapiens (human)?to=0&format=json
0.343 | 0.129 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TTGCCCCTGTTACCTAATTAGAGCA)%26(nt:TGTGTGAAGATCACGTTCCTTCCCC)%26(nt:TGGTATGTGACATGCGGGCTGGGCA)%26(nt:TGCCATGGAGGCACACAGCTGCAGA)%26(nt:TCCCCTAATGCCTGCGGAGTTGTGC)%26(nt:TAGAGTCCAACGTGGGGCAGCACAG)%26(nt:GGACTGTTGACATCCAAGCTTCCTT)%26(nt:GCACGTAGTAGGGTCAGGCCACGGC)%26(nt:GACGTGGGCGGCAGAGAGGACTGTT)%26(nt:CTTCTCTCACCTCCTAAAGTAGACT)%26(nt:CCTACCGGCAATTTCCGGCCAACAG)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.347 | 0.004 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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