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Previous release (v1)
2024-04-20 06:30:07, GGRNA : RefSeq release 222 (Jan, 2024)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
gene="TEC" /gene_synonym="PSCTK4" /replace="a" /replace="t" /db_xref="dbSNP:1235345154" variation 3294 /gene="TEC" /gene_synonym="PSCTK4" /replace="g" /replace="t" /db_xref="dbSNP:1254258928" variation 3295..3339 /gene="TEC" /gene_synonym="PSCTK4" /replace="gaaaagaaact" /replace="gaaaagaaactatctcggtcacgtgagcgccagcgaaaagaaact" /db_xref="dbSNP:1297337421" variation 3299 /gene="TEC" /gene_synonym="PSCTK4" /replace="a" /replace="g" /db_xref="dbSNP:1719406747" variation 3303 /gene="TEC" /gene_synonym="PSCTK4" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1482965843" variation 3304 /gene="...
position 3300
cgcaacaaagtttgcccccacctcacataggacccggaagcagcctgagctgtggcggaggatccaggaagctacggagagaagcagccagcatggtgttccgtgcctcccggacgtttttcaggaggcctggttggacttgggttcctggatggtgggattgttgtacagcctctcaggagaccctgctgtcaagactgtgtgtgtggatttcccacccttagaagctctactaagacatcaacggaattagggccttcctttttgccttgtgagcgccaaggaaaagaaactatctcggtcacgtgagcgccagcgaaaagaaactgtatcagtcatccagagaccgtttattgcccaacacgttattcttgctgttggtggggtaactagccgaggaagacacagcgccttcccttcaggagttgcgtctcctctgcaggccacgatggtctgctctggagcattgggtgaacacacaggctggctgctctgggcagcgccttcactctgaccctggagaaccatttcatttcatcctggtcagtctagagtctgtgcaccaggcagtccatccactgaaggctgtgtttattcttt...
position 3235
gene="TEC" /gene_synonym="PSCTK4" /replace="a" /replace="t" /db_xref="dbSNP:1235345154" variation 3233 /gene="TEC" /gene_synonym="PSCTK4" /replace="g" /replace="t" /db_xref="dbSNP:1254258928" variation 3234..3278 /gene="TEC" /gene_synonym="PSCTK4" /replace="gaaaagaaact" /replace="gaaaagaaactatctcggtcacgtgagcgccagcgaaaagaaact" /db_xref="dbSNP:1297337421" variation 3238 /gene="TEC" /gene_synonym="PSCTK4" /replace="a" /replace="g" /db_xref="dbSNP:1719406747" variation 3242 /gene="TEC" /gene_synonym="PSCTK4" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1482965843" variation 3243 /gene="...
position 3239
cgcaacaaagtttgcccccacctcacataggacccggaagcagcctgagctgtggcggaggatccaggaagctacggagagaagcagccagcatggtgttccgtgcctcccggacgtttttcaggaggcctggttggacttgggttcctggatggtgggattgttgtacagcctctcaggagaccctgctgtcaagactgtgtgtgtggatttcccacccttagaagctctactaagacatcaacggaattagggccttcctttttgccttgtgagcgccaaggaaaagaaactatctcggtcacgtgagcgccagcgaaaagaaactgtatcagtcatccagagaccgtttattgcccaacacgttattcttgctgttggtggggtaactagccgaggaagacacagcgccttcccttcaggagttgcgtctcctctgcaggccacgatggtctgctctggagcattgggtgaacacacaggctggctgctctgggcagcgccttcactctgaccctggagaaccatttcatttcatcctggtcagtctagagtctgtgcaccaggcagtccatccactgaaggctgtgtttattcttt...
position 3900
gene="TEC" /gene_synonym="PSCTK4" /replace="a" /replace="t" /db_xref="dbSNP:1235345154" variation 3898 /gene="TEC" /gene_synonym="PSCTK4" /replace="g" /replace="t" /db_xref="dbSNP:1254258928" variation 3899..3943 /gene="TEC" /gene_synonym="PSCTK4" /replace="gaaaagaaact" /replace="gaaaagaaactatctcggtcacgtgagcgccagcgaaaagaaact" /db_xref="dbSNP:1297337421" variation 3903 /gene="TEC" /gene_synonym="PSCTK4" /replace="a" /replace="g" /db_xref="dbSNP:1719406747" variation 3907 /gene="TEC" /gene_synonym="PSCTK4" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1482965843" variation 3908 /gene="...
position 3904
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : http://ggrna.dbcls.jp/hs/seq%3aGAAACTATCTCGGTCACGTGAGCGC
lang : en |
div : |
spe : hs |
query_string : seq:GAAACTATCTCGGTCACGTGAGCGC |
format : html |
download :
0.000 | 0.000 | search_start;
0.086 | 0.086 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GAAACTATCTCGGTCACGTGAGCGC)?source=Homo sapiens (human)?to=0&format=json
0.132 | 0.046 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GAAACTATCTCGGTCACGTGAGCGC)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.133 | 0.001 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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