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2024-03-28 20:00:58, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Homo sapiens eukaryotic translation elongation factor 1 alpha 1 (EEF1A1), transcript variant X1, mRNA. (3581 bp)
tttgagtgaagctcttcctggggacaatgtgggcttcaatgtcaagaatgtgtctgtcaaggatgttcgtcgtggcaacgttgctggtgacagcaaaaatgacccaccaatggaagcagctggcttcactgctcaggtgattatcctgaaccatccaggccaaataagcgccggctatgcccctgtattggattgccacacggctcacattgcatgcaagtttgctgagctgaaggaaaagattgatcgccgttctggtaaaaagctggaagatggccctaaattcttgaagtctggtgatgctgccattgttgatatggttcctggcaagcccatgtgtgttgagagcttctcagactatccacctttgggtcgctttgctgttcgtgatatgagacagacagttgcggtgggtgtcatcaaagcagtggacaagaaggctgctggagctggcaaggtcaccaagtctgcccagaaagctcagaaggctaaatgaatattatccctaatacctgccaccccactcttaatcagtggtggaagaacggtctcagaactgtttgtttcaattggccatttaagtttagtagtaaaagactg...
position 1314
Synonym: CCS-3; CCS3; EE1A1; EEF-1; EEF1A; eEF1A-1; EF-Tu; EF1A; EF1A1; EF1alpha1; GRAF-1EF; LENG7; PTI1
XM_054354427.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens eukaryotic translation elongation factor 1 alpha 1 (EEF1A1), mRNA. (3512 bp)
tttgagtgaagctcttcctggggacaatgtgggcttcaatgtcaagaatgtgtctgtcaaggatgttcgtcgtggcaacgttgctggtgacagcaaaaatgacccaccaatggaagcagctggcttcactgctcaggtgattatcctgaaccatccaggccaaataagcgccggctatgcccctgtattggattgccacacggctcacattgcatgcaagtttgctgagctgaaggaaaagattgatcgccgttctggtaaaaagctggaagatggccctaaattcttgaagtctggtgatgctgccattgttgatatggttcctggcaagcccatgtgtgttgagagcttctcagactatccacctttgggtcgctttgctgttcgtgatatgagacagacagttgcggtgggtgtcatcaaagcagtggacaagaaggctgctggagctggcaaggtcaccaagtctgcccagaaagctcagaaggctaaatgaatattatccctaatacctgccaccccactcttaatcagtggtggaagaacggtctcagaactgtttgtttcaattggccatttaagtttagtagtaaaagactg...
position 1245
Synonym: CCS-3; CCS3; EE1A1; EEF-1; EEF1A; eEF1A-1; EF-Tu; EF1A; EF1A1; EF1alpha1; GRAF-1EF; LENG7; PTI1
NM_001402.6 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

Data Export:

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Debug Info:

Redirect URI : http://ggrna.dbcls.jp/hs/seq%3aGAAGTCTGGTGATGCTGCCATTGTT
lang : en | div : | spe : hs | query_string : seq:GAAGTCTGGTGATGCTGCCATTGTT | format : html | download :

0.000 | 0.000 | search_start;
0.085 | 0.085 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GAAGTCTGGTGATGCTGCCATTGTT)?source=Homo sapiens (human)?to=0&format=json
0.132 | 0.047 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GAAGTCTGGTGATGCTGCCATTGTT)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.132 | 0.000 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]