GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2021-07-28 03:28:15, GGRNA : RefSeq release 206 (May, 2021)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Homo sapiens integral membrane protein 2A (ITM2A), transcript variant 2, mRNA. (1484 bp)
ctgaggaggctgacattcgtgaggatgacaacattgcaatcattgatgtgcctgtccccagtttctctgatagtgaccctgcagcaattattcatgactttgaaaagggaatgactgcttacctggacttgttgctggggaactgctatctgatgcccctcaatacttctattgttatgcctccaaaaaatctggtagagctctttggcaaactggcgagtggcagatatctgcctcaaacttatgtggttcgagaagacctagttgctgtggaggaaattcgtgatgttagtaaccttggcatctttatttaccaactttgcaataacagaaagtccttccgccttcgtcgcagagacctcttgctgggtttcaacaaacgtgccattgataaatgctggaagattagacacttccccaacgaatttattgttgagaccaagatctgtcaagagtaagaggcaacagatagagtgtccttggtaataagaagtcagagatttacaatatgactttaacattaaggtttatgggatactcaagatatttactcatgcatttactctattgcttatgctttaaaaaaaggaaaaaaaaaaa...
position 356 382 396 433 458 472 519 547 644 722 864
Synonym: BRICD2A; E25A
NM_001171581.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens integral membrane protein 2A (ITM2A), transcript variant 1, mRNA. (1616 bp)
ctgaggaggctgacattcgtgaggatgacaacattgcaatcattgatgtgcctgtccccagtttctctgatagtgaccctgcagcaattattcatgactttgaaaagggaatgactgcttacctggacttgttgctggggaactgctatctgatgcccctcaatacttctattgttatgcctccaaaaaatctggtagagctctttggcaaactggcgagtggcagatatctgcctcaaacttatgtggttcgagaagacctagttgctgtggaggaaattcgtgatgttagtaaccttggcatctttatttaccaactttgcaataacagaaagtccttccgccttcgtcgcagagacctcttgctgggtttcaacaaacgtgccattgataaatgctggaagattagacacttccccaacgaatttattgttgagaccaagatctgtcaagagtaagaggcaacagatagagtgtccttggtaataagaagtcagagatttacaatatgactttaacattaaggtttatgggatactcaagatatttactcatgcatttactctattgcttatgctttaaaaaaaggaaaaaaaaaaa...
position 488 514 528 565 590 604 651 679 776 854 996
Synonym: BRICD2A; E25A
NM_004867.5 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/hs/202747_s_at
lang : en | div : | spe : hs | query_string : 202747_s_at | format : html | download :

0.000 | 0.000 | search_start;
0.090 | 0.090 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:TGCAATCATTGATGTGCCTGTCCCC)?source=Homo sapiens (human)?to=0&format=json
0.101 | 0.012 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:TGATGCCCCTCAATACTTCTATTGT)?source=Homo sapiens (human)?to=0&format=json
0.111 | 0.010 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:TGACTGCTTACCTGGACTTGTTGCT)?source=Homo sapiens (human)?to=0&format=json
0.123 | 0.011 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GTTTCTCTGATAGTGACCCTGCAGC)?source=Homo sapiens (human)?to=0&format=json
0.131 | 0.008 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GGGGAACTGCTATCTGATGCCCCTC)?source=Homo sapiens (human)?to=0&format=json
0.141 | 0.010 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GATATTTACTCATGCATTTACTCTA)?source=Homo sapiens (human)?to=0&format=json
0.150 | 0.009 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GATATCTGCCTCAAACTTATGTGGT)?source=Homo sapiens (human)?to=0&format=json
0.160 | 0.009 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GAGCTCTTTGGCAAACTGGCGAGTG)?source=Homo sapiens (human)?to=0&format=json
0.170 | 0.010 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GACCCTGCAGCAATTATTCATGACT)?source=Homo sapiens (human)?to=0&format=json
0.180 | 0.010 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GAAGATTAGACACTTCCCCAACGAA)?source=Homo sapiens (human)?to=0&format=json
0.191 | 0.012 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:CAATAACAGAAAGTCCTTCCGCCTT)?source=Homo sapiens (human)?to=0&format=json
0.226 | 0.035 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:TGCAATCATTGATGTGCCTGTCCCC)%26(nt:TGATGCCCCTCAATACTTCTATTGT)%26(nt:TGACTGCTTACCTGGACTTGTTGCT)%26(nt:GTTTCTCTGATAGTGACCCTGCAGC)%26(nt:GGGGAACTGCTATCTGATGCCCCTC)%26(nt:GATATTTACTCATGCATTTACTCTA)%26(nt:GATATCTGCCTCAAACTTATGTGGT)%26(nt:GAGCTCTTTGGCAAACTGGCGAGTG)%26(nt:GACCCTGCAGCAATTATTCATGACT)%26(nt:GAAGATTAGACACTTCCCCAACGAA)%26(nt:CAATAACAGAAAGTCCTTCCGCCTT)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.228 | 0.001 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]