GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2024-04-20 17:39:33, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 8, mRNA. (3054 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 2996
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NM_001347858.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 7, mRNA. (3081 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3023
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NM_001347856.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 10, non-coding RNA. (3104 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3046
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NR_144756.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 11, non-coding RNA. (3126 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3068
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NR_144757.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 9, non-coding RNA. (3153 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3095
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NR_144755.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 3, mRNA. (3160 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3102
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NM_001347857.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 2, mRNA. (3163 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3105
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NM_001100626.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 5, mRNA. (3218 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3160
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NM_001347860.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 6, mRNA. (3221 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3163
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NM_001347861.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 12, non-coding RNA. (3235 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3177
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NR_144758.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 14, non-coding RNA. (3267 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3209
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NR_144760.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 13, non-coding RNA. (3293 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3235
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NR_144759.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 4, mRNA. (3326 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3268
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NM_001347859.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ER lipid raft associated 1 (ERLIN1), transcript variant 1, mRNA. (3487 bp)
gaattgttgctgcagatgattgttgtggaaaatctggatcattgacctctgtgctttcattcctagagatgttttatagttacatgagcaaaagctgttgccccaaagtgatggccctggaggcggggctgaggaacagggaaatgccgctgtgaagtcttaaagcacttctgcttaaactcccatgtgtgaggagtgtgcctccctgtgccctctcagctctgaggctggccgtctttcggggtgttccttttggcaaatatacactgtaatcttgagtctaaatttatatgttgaaatgctaccttttttaaaataagaaactaaataaaattattttactatca
position 3429
Synonym: C10orf69; Erlin-1; KE04; KEO4; SPFH1; SPG62
NM_006459.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

Data Export:

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Debug Info:

Redirect URI : http://ggrna.dbcls.jp/hs/seq%3aATATGTTGAAATGCTACCTTTTTTA
lang : en | div : | spe : hs | query_string : seq:ATATGTTGAAATGCTACCTTTTTTA | format : html | download : 

0.000 | 0.000 | search_start;
0.082 | 0.082 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:ATATGTTGAAATGCTACCTTTTTTA)?source=Homo sapiens (human)?to=0&format=json
0.347 | 0.265 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:ATATGTTGAAATGCTACCTTTTTTA)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.349 | 0.002 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]