ver.2
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Previous release (v1)
2024-04-24 17:28:59, GGRNA : RefSeq release 222 (Jan, 2024)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
GeneID:101928296" misc_RNA 1..387 /gene="LOC101928296" /product="ATP synthase-coupling factor 6, mitochondrial-like" /pseudo /db_xref="GeneID:101928296" ORIGIN // atgttgagagaagcctggaaacctggatgggacagcaagagtaaaggccaaagaatcagccagattctccagaggctcttcaggttctcctctgtctttcagtcagcagtctcagtccatttgcggaggaacattggtgttacagcagtggcgtttaataaggaacttgatcctgtacagaaactctttatgtacaaggttagagaatacaaatctaagtgacagacatctggaggatctgttgatactgatccagagtaccagcaagagccagagaagaagctttttaagctcaagcaagtgtatggtaaagcagacatgaatacattccctaacttcaaatttgaagatcccaaacttgaagtcatcaaaaaaccccaggcctga
position 122
replace="c" /replace="t" /db_xref="dbSNP:1200229094" variation 476 /gene="LOC101928296" /replace="a" /replace="g" /db_xref="dbSNP:1819442722" ORIGIN // atgttgagagaagcctggaaacctggatgggacagcaagagtaaaggccaaagaatcagccagattctccagaggctcttcaggttctcctctgtctttcagtcagcagtctcagtccatttgcggaggaacattggtgttacagcagtggcgtttaataaggaacttgatcctgtacagaaactctttatgtacaaggttagagaatacaaatctaagtgacagacatctggaggatctgttgatactgatccagagtaccagcaagagccagagaagaagctttttaagctcaagcaagtgtatggtaaagcagacatgaatacattccctaacttcaaatttgaagatcccaaacttgaagtcatcaaaaaaccccaggcctgaagaaataaagtaaaattaacctggtaagttgtcaagggttagctgtacaactagctagaag...
position 122
oxidative phosphorylation based on a molecular explanation of the oxygen exchange reactions JOURNAL Proc Natl Acad Sci U S A 70 (10), 2837-2839 (1973) PUBMED 4517936 agagcggaggtggtggcggcggaggctttggcagctcgggactgagtgcaagaatcagcatgattcttcagaggctcttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggtgttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaagattagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagagtatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagacatgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccccaggcctgaagaaataaagtaaaattaatctggtaatttgtcacggattagttgtac...
position 121
based on a molecular explanation of the oxygen exchange reactions JOURNAL Proc Natl Acad Sci U S A 70 (10), 2837-2839 (1973) PUBMED 4517936 ctgtttggcttctgtctcacctagacccgtccggtcgcagactgtctccgagacgcttcctgtccgaatcagcatgattcttcagaggctcttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggtgttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaagattagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagagtatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagacatgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccccaggcctgaagaaataaagtaaaattaatctggtaatttgtcacggattagttgtacaactagttagaa...
position 135
explanation of the oxygen exchange reactions JOURNAL Proc Natl Acad Sci U S A 70 (10), 2837-2839 (1973) PUBMED 4517936 agagcggaggtggtggcggcggaggctttggcagctcgggactgagtgcaaggaatatgcactgaagaggcagcgaacctactaacctttggccgaatcagcatgattcttcagaggctcttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggtgttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaagattagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagagtatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagacatgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccccaggcctgaagaaataaagtaaaattaatctggtaatttgtcacggattagttgtacaact...
position 164
oxygen exchange reactions JOURNAL Proc Natl Acad Sci U S A 70 (10), 2837-2839 (1973) PUBMED 4517936 ctgtttggcttctgtctcacctagacccgtccggtcgcagactgtctccgagacgcttcctgtccggtgagcgtcgaccgactgaaacggcggcccataatgcattgcgatggcggaatcagcatgattcttcagaggctcttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggtgttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaagattagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagagtatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagacatgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccccaggcctgaagaaataaagtaaaattaatctggtaatttgtcacggattagttgtacaa...
position 185
Sci U S A 70 (10), 2837-2839 (1973) PUBMED 4517936 gtgggggaaaaggccccggaacgaggccggcccgcgagggcccgcgctcccctcctccccggcggccgcactcacccactccggaatcggccctgtcgcccccgcccgcactccagagccggctgagaacggcagcggcgagggctccacgtgcagcgtctctccggaatcagcatgattcttcagaggctcttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggtgttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaagattagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagagtatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagacatgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccccaggcctgaagaaataaagtaaaattaatctggtaatttgtcacggattagttgtac...
position 236
cggctgagaacggcagcggcgagggctccacgtgcagcgtctctccgggtaagacctgcagctcccgcgactagaagtgtgaggtcccagggcccttcccgcggaatcggcgctgagaagccccaacccccctcccgcctcccaggcaccttcgggtccaggactacaactcccggcagggtgcgcaaaacgaccgcccaaggcaacggaggctcacgagaatcagcatgattcttcagaggctcttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggtgttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaagattagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagagtatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagacatgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccccaggcctgaagaaataaagtaaaattaatctggtaatttgtcacggattagttgt...
position 408
gcgggagagattttcggccaggcctacccgccccgggcgcacgggagcgtctaggctacttaggcagaacgtgtaccattaagagggaaaaaattagtcataatattgaaagtttgcatcccacctaaaaacgatggtgctaacacttcattaggcgactttatggattgttcataggaatatgcactgaagaggcagcgaacctactaacctttggccgaatcagcatgattcttcagaggctcttcaggttctcctctgtcattcggtcagccgtctcagtccatttgcggaggaacattggtgttacagcagtggcatttaataaggaacttgatcctatacagaaactctttgtggacaagattagagaatacaaatctaagcgacagacatctggaggacctgttgatgctagttcagagtatcagcaagagctggagagggagctttttaagctcaagcaaatgtttggtaatgcagacatgaatacatttcccaccttcaaatttgaagatcccaaatttgaagtcatcgaaaaaccccaggcctgaagaaataaagtaaaattaatctggtaatttgtcacggattagttgt...
position 641
Data Export:
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Debug Info:
Redirect URI : http://ggrna.dbcls.jp/hs/seq%3aTGCGGAGGAACATTGGTGTTACAGC
lang : en |
div : |
spe : hs |
query_string : seq:TGCGGAGGAACATTGGTGTTACAGC |
format : html |
download :
0.000 | 0.000 | search_start;
0.084 | 0.084 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:TGCGGAGGAACATTGGTGTTACAGC)?source=Homo sapiens (human)?to=0&format=json
0.135 | 0.051 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:TGCGGAGGAACATTGGTGTTACAGC)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.136 | 0.001 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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