GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2024-04-20 11:21:17, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Homo sapiens NADH:ubiquinone oxidoreductase subunit B8 (NDUFB8), transcript variant 3, mRNA; nuclear gene for mitochondrial product. (667 bp)
actggggtgaaccgatgcactggcacctagacatgtacaacaggaaccgtgtggatacatcccccacacctgtttcttggcatgtcatgtgtatgcagctcttcggtttcctggctttcatgatattcatgtgctgggtgggggacgtgtaccctgtctaccagcctgtgggaccaaagcagtatccttacaataatctgtacctggaacgaggcggtgatccctccaaagaaccagagcgggtggttcactatgagatctgaggaggcttcgtgggcttttgggtcctctaactaggactccctcattcctagaaatttaaccttaatgaaatccctaataaaactcagtgctgtgttatttgtgcctcaaaaaaaaaaaaaaaaaa
position 568
Synonym: ASHI; CI-ASHI; MC1DN32
NM_001284368.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens NADH:ubiquinone oxidoreductase subunit B8 (NDUFB8), transcript variant 1, mRNA; nuclear gene for mitochondrial product. (678 bp)
actggggtgaaccgatgcactggcacctagacatgtacaacaggaaccgtgtggatacatcccccacacctgtttcttggcatgtcatgtgtatgcagctcttcggtttcctggctttcatgatattcatgtgctgggtgggggacgtgtaccctgtctaccagcctgtgggaccaaagcagtatccttacaataatctgtacctggaacgaggcggtgatccctccaaagaaccagagcgggtggttcactatgagatctgaggaggcttcgtgggcttttgggtcctctaactaggactccctcattcctagaaatttaaccttaatgaaatccctaataaaactcagtgctgtgtta
position 607
Synonym: ASHI; CI-ASHI; MC1DN32
NM_005004.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens NADH:ubiquinone oxidoreductase subunit B8 (NDUFB8), transcript variant 2, mRNA; nuclear gene for mitochondrial product. (888 bp)
ccttgggctgagtgaggaagaggagtgctgttcctgccttcctagcccagctgggtctgaccagaggctactgtgtacccatttaccatgcgtgattgttaactcagagtggggtgtagccaggtattgactgaatgtatgttcttgctgacctgtgtttttttctgtagggaccaaagcagtatccttacaataatctgtacctggaacgaggcggtgatccctccaaagaaccagagcgggtggttcactatgagatctgaggaggcttcgtgggcttttgggtcctctaactaggactccctcattcctagaaatttaaccttaatgaaatccctaataaaactcagtgctgtgtta
position 817
Synonym: ASHI; CI-ASHI; MC1DN32
NM_001284367.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/hs/seq%3aTCTAACTAGGACTCCCTCATTCCTA
lang : en | div : | spe : hs | query_string : seq:TCTAACTAGGACTCCCTCATTCCTA | format : html | download : 

0.000 | 0.000 | search_start;
0.082 | 0.082 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:TCTAACTAGGACTCCCTCATTCCTA)?source=Homo sapiens (human)?to=0&format=json
0.102 | 0.020 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:TCTAACTAGGACTCCCTCATTCCTA)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.103 | 0.000 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]