LOCUS       XM_040650649            3554 bp    mRNA    linear   VRT 01-MAR-2022
DEFINITION  PREDICTED: Gallus gallus ELKS/RAB6-interacting/CAST family member 1
            (ERC1), transcript variant X13, mRNA.
ACCESSION   XM_040650649
VERSION     XM_040650649.2
DBLINK      BioProject: PRJNA698609
KEYWORDS    RefSeq.
SOURCE      Gallus gallus (chicken)
  ORGANISM  Gallus gallus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
            Phasianidae; Phasianinae; Gallus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_052532.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Mar 1, 2022 this sequence version replaced XM_040650649.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Gallus gallus Annotation Release 106
            Annotation Version          :: 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3554
                     /organism="Gallus gallus"
                     /mol_type="mRNA"
                     /isolate="bGalGal1"
                     /db_xref="taxon:9031"
                     /chromosome="1"
                     /sex="female"
                     /tissue_type="blood"
                     /country="USA: Fayetteville"
                     /lat_lon="36.0822 N 94.1719 W"
                     /collection_date="20-May-2019"
                     /collected_by="Nick Anthony"
     gene            1..3554
                     /gene="ERC1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 2 ESTs, 102 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 4 samples with support for
                     all annotated introns"
                     /db_xref="CGNC:9835"
                     /db_xref="GeneID:418153"
     misc_feature    1
                     /gene="ERC1"
                     /experiment="COORDINATES: cap analysis [ECO:0007248]"
                     /note="transcription start site"
     CDS             218..3376
                     /gene="ERC1"
                     /codon_start=1
                     /product="ELKS/Rab6-interacting/CAST family member 1
                     isoform X8"
                     /protein_id="XP_040506583.1"
                     /db_xref="GeneID:418153"
                     /db_xref="CGNC:9835"
                     /translation="

MYGSARSVGKAEPSNQSPGRSPRLPRSPRLGHRRTNSTGGSSGSSTGGGSGKTLSMENIQSLNAAYATSGPMYLSDHENVGADTPKSTMTLGRSGGRLPYGVRMTAMGSSPNIASSGVASDTIAFGEHHLPPVSMASTVPHSLRQARDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVLQEENQHMQMTIQALQDELRIQRDLNQLFQQDSSSRTSEPFVAELTEENFQRLHTEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNMLREEIHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSAKEVQGEDLKKRVAGLQAEIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQEIAEEKGTQAGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSSLKDRVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDTYKKDIKDLKEKVGILQGDLTEKESSLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMETQLKKAHEATLEARASPELSDRMQQLEREVTRYREESSKAQAEVDRLLEILKEMENEKNDKDKKIAELERKHASRKLHPPYQVSVPAPQHVGGFVWDFLGNLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQDNLRKKDDRIEELEEALRESVQITAEREMVLAQEESARINAEKQVEELMMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQDEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHLKSSSHSNQTNHKPSPDQDEEEGIWA"

     misc_feature    677..3268
                     /gene="ERC1"
                     /note="RIM-binding protein of the cytomatrix active zone;
                     Region: Cast; pfam10174"
                     /db_xref="CDD:431111"
     misc_feature    2753..>2941
                     /gene="ERC1"
                     /note="aerobic respiration control sensor protein ArcB;
                     Provisional; Region: PRK11091"
                     /db_xref="CDD:236842"
ORIGIN      

ggggggggagagaggcggaggcgaccgggctcgccgtggcgctgacgggcagatgtggtcctggacgttgtgagcatgtgacttcaaagatggacaactggatctattacaaattctgattggccttaagctgacttacaaacactgaagagcttcacgggatttctctcattcctaatttatgcctgtctaattgcctcacaccaccagcttaatcatgtatggaagtgctcggtcagttggcaaggctgagccaagcaaccagagtccagggcgttcaccaaggctgccacggtcaccacgcttgggccatcgtcgaaccaacagcactggaggcagttctggcagtagtactgggggcggcagtgggaaaaccctctctatggaaaatattcagtccttaaatgctgcctatgctacgtctggccctatgtatctaagtgaccatgagaacgtcggtgcagacaccccgaaaagcaccatgactttgggccggtctggggggcggctgccttatggtgttaggatgactgcaatgggtagcagccctaacattgccagtagtggagtcgccagtgatactatcgcgtttggagagcaccaccttcctccagtgagtatggcgtccactgtgcctcactcacttcgccaggccagggataacacaatcatggatctgcagacacaacttaaagaagtattaagggaaaatgatctgcttcgcaaggatgtggaagtgaaagaaagtaagctgagctcttccatgaacagcatcaagaccttctggagtcctgagctgaaaaaagaaagagctctgaggaaagatgaagcttcaaaaatcaccatttggaaggaacagtatagagttttgcaagaagaaaaccagcatatgcagatgactatccaggctcttcaagatgaacttcggatccagcgggacctgaaccaactgttccagcaggacagcagctcgagaaccagtgagccctttgtggcagagctgacagaggaaaactttcagcggcttcacacggagcatgagcgccaggccaaggaactcttcctcctacgtaaaaccttagaagagatggaactgcgtattgagacacagaaacagaccttaaatgcacgtgatgagtccatcaaaaagctgctggagatgctgcagagtaaaggtctgtcagcaaaagccactgaggaagatcacgaacgaacaagacggttggctgaggcagagatgcatgtacaccacttggagagccttctcgaacagaaggaaaaggaaaacaacatgctgagagaggagatacatcgacggtttgaaaatgctcctgactcagccaagacaaaggctctgcaaactgttattgagatgaaggattcaaaaatttcttccatggagcgtggcctccgggatttggaagaggagattcagatgttgaagtcaaatggagctctgagcacagaggagcgtgaagaagaaatgaagcaaatggaggtgtaccgtagtcattccaaattcatgaaaaataaggtagagcaactgaaggaagagctaagtgccaaagaggttcaaggggaggacctgaaaaaaagagtggctggtctccaggccgagattggtcaggtgaagcaggagctgtcacgcaaagacacagagttgctagccttgcagacaaagctggagaccctcacaaatcagttctctgacagcaagcagcatattgaagttctgaaagagtctcttacagctaaagagcaaagagcggccattctgcagacagaggtggatgcattacgcttacgtttggaggagaaagagaccatgctaaacaagaagacaaagcagattcaggagattgcagaagagaaaggcactcaagcaggagagatccatgatctcaaggatatgttagaggtgaaggaacgcaaagttaacgttcttcagaagaagattgaaaatcttcaagagcagctaagagacaaggaaaagcaaatgagcagtttaaaggatcgagtgaaatccttgcaggctgacaccaccaatactgatactgccttgaccacgctggaagaagcacttgcagaaaaagaaaggaccattgagcgcctaaaggagcagcgggacagagatgaacgagaaaaacaagaagagattgacacctacaaaaaagacattaaggacctgaaagagaaagtcggcattttacaaggagatctcacagagaaagagtcatccttactggatctgaaggagcatgcttcatccttagcttcatcgggactgaagaaagattcaaggctcaagacactggaaatcgcattggaacagaaaaaggaagaatgtttgaaaatggaaactcaattgaagaaggcccatgaggcaactcttgaggcgagggccagcccagagctgagtgatcgcatgcagcagctggagcgggaggtaacgaggtatcgggaagagtcaagtaaggctcaagctgaagtggatcgtcttctggaaatcttgaaggagatggaaaatgagaagaatgataaggataagaaaattgcagaactggagagaaagcacgcctcccgcaaattgcaccctccctaccaggtgtcggtccccgcaccgcaacacgtaggggggtttgtgtgggacttcctgggaaatctcacgtcaaggcaagttaaagatcaaaataagaaagtagcaaatctgaagcataaagagcaagtggagaagaagaagagtgcacaaatgctggaggaggccaggagacgagaagataatcttaatgacagctcccaacagcttcaggacaatctgcgtaaaaaggatgatcggattgaagaattggaagaggcactcagagaaagtgttcagataactgcagagcgggaaatggtgctagcacaagaggagtcagccaggatcaatgctgagaaacaggtagaagagctgatgatggccatggagaaggttaagcaggagctggagtcaatgaaagcaaaattgtcttctacacagcagtctttggctgagaaggaaacccatctgaccaacctacgagcagaaagaagaaaacatttggaggaagtcctggagatgaaacaagaagcccttcttgctgccattagtgaaaaagatgccaatattgctctgctagaactttcatcctctaagaagaagactcaggatgaagtggctgccctcaaacgagagaaagaccgccttgtgcaacagctcaagcagcagacacagaaccgtatgaagctgatggctgacaactatgaggatgatcacctcaaatcctcatcccattccaaccaaaccaaccacaaaccctccccagaccaggatgaggaggagggtatttgggcataaccagtcagatgctcttagctcagccattttgttcagaacgataattcagcccctcttagaacttgatcagaatcgcagcaagttgaagctgtacattggacatctgacagccctctgccatgaccgtgaccccttgattctgcgtggactcaccccacctgcttcctaccacttggat

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