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Previous release (v1)
2024-05-03 00:16:47, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001287187 8819 bp mRNA linear VRT 23-SEP-2023
DEFINITION Gallus gallus ankyrin repeat domain 26 (ANKRD26), mRNA.
ACCESSION NM_001287187 XM_004937532
VERSION NM_001287187.2
KEYWORDS RefSeq.
SOURCE Gallus gallus (chicken)
ORGANISM Gallus gallus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Phasianinae; Gallus.
REFERENCE 1 (bases 1 to 8819)
AUTHORS Burge S, Kelly E, Lonsdale D, Mutowo-Muellenet P, McAnulla C,
Mitchell A, Sangrador-Vegas A, Yong SY, Mulder N and Hunter S.
TITLE Manual GO annotation of predictive protein signatures: the InterPro
approach to GO curation
JOURNAL Database (Oxford) 2012, bar068 (2012)
PUBMED 22301074
REMARK Publication Status: Online-Only
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from
JAENSK010000012.1.
On Sep 23, 2021 this sequence version replaced NM_001287187.1.
Sequence Note: The RefSeq transcript and protein were derived from
genomic sequence to make the sequence consistent with the reference
genome assembly. The genomic coordinates used for the transcript
record were based on alignments.
##Evidence-Data-START##
RNAseq introns :: single sample supports all introns SAMN05341171
[ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
inferred exon combination :: based on alignments, homology
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-341 JAENSK010000012.1 14831953-14832293
342-456 JAENSK010000012.1 14834335-14834449
457-630 JAENSK010000012.1 14834693-14834866
631-737 JAENSK010000012.1 14834983-14835089
738-875 JAENSK010000012.1 14835502-14835639
876-1024 JAENSK010000012.1 14836332-14836480
1025-1075 JAENSK010000012.1 14839211-14839261
1076-1109 JAENSK010000012.1 14840892-14840925
1110-1182 JAENSK010000012.1 14841006-14841078
1183-1243 JAENSK010000012.1 14842309-14842369
1244-2238 JAENSK010000012.1 14842745-14843739
2239-2392 JAENSK010000012.1 14844449-14844602
2393-2454 JAENSK010000012.1 14846105-14846166
2455-2557 JAENSK010000012.1 14847186-14847288
2558-2586 JAENSK010000012.1 14848886-14848914
2587-2653 JAENSK010000012.1 14849014-14849080
2654-2698 JAENSK010000012.1 14849169-14849213
2699-2784 JAENSK010000012.1 14851612-14851697
2785-3759 JAENSK010000012.1 14853085-14854059
3760-3977 JAENSK010000012.1 14854834-14855051
3978-4109 JAENSK010000012.1 14855876-14856007
4110-4143 JAENSK010000012.1 14856727-14856760
4144-4282 JAENSK010000012.1 14856976-14857114
4283-4496 JAENSK010000012.1 14858625-14858838
4497-4680 JAENSK010000012.1 14861127-14861310
4681-4827 JAENSK010000012.1 14863184-14863330
4828-5784 JAENSK010000012.1 14863904-14864860
5785-5937 JAENSK010000012.1 14865105-14865257
5938-6113 JAENSK010000012.1 14866498-14866673
6114-6207 JAENSK010000012.1 14866869-14866962
6208-6285 JAENSK010000012.1 14868165-14868242
6286-6420 JAENSK010000012.1 14869688-14869822
6421-6533 JAENSK010000012.1 14870774-14870886
6534-6675 JAENSK010000012.1 14871302-14871443
6676-6957 JAENSK010000012.1 14872161-14872442
6958-7193 JAENSK010000012.1 14873356-14873591
7194-7440 JAENSK010000012.1 14874000-14874246
7441-7486 JAENSK010000012.1 14876494-14876539
7487-8819 JAENSK010000012.1 14878932-14880264
FEATURES Location/Qualifiers
source 1..8819
/organism="Gallus gallus"
/mol_type="mRNA"
/db_xref="taxon:9031"
/chromosome="1"
/map="1"
gene 1..8819
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="ankyrin repeat domain 26"
/db_xref="CGNC:50594"
/db_xref="GeneID:417764"
exon 1..341
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
misc_feature 130..132
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="upstream in-frame stop codon"
CDS 139..7635
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="ankyrin repeat domain 7"
/codon_start=1
/product="ankyrin repeat domain-containing protein 26"
/protein_id="NP_001274116.2"
/db_xref="CGNC:50594"
/db_xref="GeneID:417764"
/translation="
MKKIFGFGRKKKGDPPPGSTASPCPAGAYELRQKELGKLHRAAAAGDLAQVRQGLKKHGVDGRDKAQRTPLHLACANGHADVVTFLVESKCKLNLFDNDNRSPLMKAVQCQQEKCVAILLEHGADPNLADANGNTALHLAAVAPNTFLAGMLIEHNAHIDAQNKEGCTPLTLAVSEHRQEMVELLLKKGADVNARDLCERTPLMTAASGGELKLVKVLLRYGADLSHKDTNGWTAEDYAIIHGYDSLSNQLAEYADWENTGEASAGATRGISVPMTPHKARAAGFTLGAPAVDRGGTQQSPKQTPRTGESRKAIDDFSQGDSIRSSEKEGSNDSWHTSEEEELDFTPKKPQKPNLTMLMNVSKKFRNIVGGDSSRIESPKSQKKSLQQKEPTDANLNKGECGELLNQDVSDSSNLEEDELEEEEEEEEDENDDGDDDEEYEEEEEEDLTPDEKEEEDLEDEETQSNDIMEEEQRGKIEPKEEINQNLEYLSNVKNEGDAQCGAGSVSSDYQKTCKKTDEKMEESVDTPVSFIDGCYERLQENITAMSPKRMNNEVSYESVPKQAVLQNLNNLQDKQESCNKKSMIQKLFHRNTASCFADSEMTDLKKEIPQPLSNSGDLQEEKLSFSDGFKSSSGSWSAAENIKLENQRPSSVTDDEDTEEGQYKEVDNKVHEALKQEGENLCLNRCEENLRATFSSSTKEESPKWEEEEEQEKEDTGEKLQTTVFEGVKNSVCSINHQVHNASEDTANERSTLPAIGAQQEKESESPWDSEMDSESLRKASPGVLLPAADEHGVCLQNISGEHNNGFSEKPSNLQLKVSASLLEMNETSPKKEGQKSDLREELSLGDVDDIEGECSESVFHVPSSAEKGMVKDAIENYGRQDKCVLETTSLIEKTAYEKQTDKAEISHQETLGENEESHSADKQLSLKPWEERYERMWVEKEKRELKTNFKNITAELKQLFGEINESEKATSLVAEVSEDDFNEELKSFRVSSCATESSNKLESKGEFGDMKLNVDLKEPKTEIVIPSLGVLPDHNNLNANVENTWSTDEEDCTNYTDNTNVPLAKGEEMEENENGISKSVEGSPEYSPRYCLKTNILDDISNILPKVRPISTNDGSTLDFIREKKFGKDVCLSDSVSRDCFIKNKEIGEKEIENLFPHAQQPCGMLKRNLDEELKQDVERFKSKVGMLQMVFLALEKEKVQLQKEVEKEKRKQKHFKVQAVEKQEGLDKLNTPAGNITNQPVKEKLALRKNEKMTEEKHTKNFSSEERPKLVEMPIKGKSVLNAKGMKKNEKKRQSSKQRANRKIQLMDDSTFSETSQDEERPATKTGSEKNKGSMQMDVTDDLDLTQSSDTTTEDAELPTSTYKEAMLLFEQLSVDHTDSAILLKIQNILLEYEQIIDCEKKRYTALWREVKKLESEKEESQLIAEETQDLKSILAHQEMELKSDIQSLKFSLKQEEEKRLRAEMQYEKMREQLRRKEDQYCRETEERQQLELHARNLETELITLRKLMKQIEEERDETQRQLSQEKSARALQEGILNSHLWRQKELEEETRKTIGKNSEESDTNDREKDLLHRNQLLQEEIAMLRLELDQVKLRHQENEGKYLEENESLKEKNDDLQKELKLNEEALTQTVLQYNGQLNLLKTESAMLTSKLEQTKESKDRLETEIESFRSRLNAAVQDLERHQSLKSDVERTFQRERDEWLRLQDKLHCELSDVRETNKSLSQQLSKMESKANSLENELHQFKQTLREKTLLLEMTQKDLNQAQCQAKESDHARQLEKDQVSKFMIKQESMQERLAQLQSENLLLRQQLEDMQNKGIIKEKVVNDVQDKFNDIFNKLRADTEKQVYLMEERNKELNTKCTDLREQVFKYETDKVEREGMVRQLQQELADALKKQSMSEASLEVTTRYRSDLEEDKLRLQKELDRVKTKLQESEEQRIQSEHCVHDLKTVLDNKEREVSASSQKLQDLLLATSGTNTTIKQLEEHVQRLEIENARLEAAAKQQTNRIEALQKDLQASTSVHNRLEDLITGLRTAQTAAEEYQHQQMQKQNMLAMTSKDSRNMWEEELKSRAHLEDRLAQLDREKAELLEQCESERKKVKKLVELKRPVEARLDQEMKRNIELQKECHRCKRLLNRAVKKLRMYEARERESQFNFQGEMKNRYSEMVNEVGKLRTKVTELSQQLELESKKCIQLEAQNQDLREELSALRENHEKLEKSKCQLKEEVANLRHHLEANMVNHSQIEQYKKEMEERAGQEIRQKLQEVNLFLQTQAASQDRLEQIRANHHASLRNQLKHRIKDLECELDRIKNTQQDSIFQKESTQAEVEKYKEMYLEEMKIRRSLANKLERANERLAEANAKLLQERHRSKSLIASSIVTGGLSANPVLYSTELGHLGNNLALNRSLSLGGSFLGTAGNALSSRNKVEAYMAKIRKELDEKITKELEQATAELETGSAGASPMVSTDGSSRNLNVDQDPLCRAIQEYRDVLTKNYLI"
misc_feature 253..399
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="Ankyrin repeats (many copies); Region: Ank_4;
pfam13637"
/db_xref="CDD:372654"
misc_feature 334..429
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 349..726
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:432791"
misc_feature order(433..435,439..441,451..456,463..471,475..480,
490..492,499..501,526..528,532..534,538..540,550..555,
562..570,574..579,589..591,598..600,625..627,631..633,
637..639,649..654,661..669,673..678,688..690,697..699,
724..726)
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:293786"
misc_feature 433..528
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 532..627
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 631..726
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 646..900
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:432791"
misc_feature 730..825
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 829..903
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature <3658..5043
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="MAEBL; Provisional; Region: PTZ00121"
/db_xref="CDD:173412"
misc_feature 4378..6942
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="Chromosome segregation ATPase [Cell cycle control,
cell division, chromosome partitioning]; Region: Smc;
COG1196"
/db_xref="CDD:224117"
misc_feature 4870..5781
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="CCDC144C protein coiled-coil region; Region:
CCDC144C; pfam14915"
/db_xref="CDD:434310"
misc_feature 7018..7362
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/note="Domain of unknown function (DUF3496); Region:
DUF3496; pfam12001"
/db_xref="CDD:432253"
exon 342..456
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 457..630
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 631..737
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 738..875
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 876..1024
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 1025..1075
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 1076..1109
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 1110..1182
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 1183..1243
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 1244..2238
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 2239..2392
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 2393..2454
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 2455..2557
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 2558..2586
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 2587..2653
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 2654..2698
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 2699..2784
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 2785..3759
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 3760..3977
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 3978..4109
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 4110..4143
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 4144..4282
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 4283..4496
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 4497..4680
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 4681..4827
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 4828..5784
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 5785..5937
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 5938..6113
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 6114..6207
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 6208..6285
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 6286..6420
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 6421..6533
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 6534..6675
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 6676..6957
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 6958..7193
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 7194..7440
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 7441..7486
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
exon 7487..8819
/gene="ANKRD26"
/gene_synonym="ANKRD7"
/inference="alignment:Splign:2.1.0"
ORIGIN
gcgcatgcgcggggctcccggctctgggagggggtgtggggtcgttctgtctgtgacttgggccgcgctttggcgagtgtacggcggcttcgcgtgtagtgctcggggctccccggcccgacagagttctgagacgacatgaagaagatattcggcttcggaaggaagaagaaaggggatccgccgcccggcagcaccgcttcgccgtgtcccgccggtgcgtacgagctccgccagaaggagctgggcaagctgcaccgcgcggccgccgccggagacctggcccaggtgcggcaggggctgaagaagcacggcgtcgacgggcgcgacaaggcgcagcggacaccactgcatcttgcttgtgcaaatggacatgcggatgtcgttacgtttctagtagaaagcaagtgtaagctaaatctttttgacaatgataacagatcaccactgatgaaggcagtacaatgccagcaagaaaaatgtgtggcaatcctgctagagcacggtgctgatccgaacttggcagatgctaacggcaacactgcccttcacctggctgctgtagctcctaacacatttctagcagggatgttaattgagcacaatgctcatattgatgctcagaataaggagggatgtactccccttactcttgctgtctctgaacatcgtcaagagatggtagagctccttcttaaaaaaggagctgatgttaatgctcgagatctgtgtgaaagaactccacttatgactgctgcatccggtggggagcttaagttggtaaaagttcttcttcgctatggtgctgatctttcccataaagacactaatggatggacagctgaggattatgctattattcatggatatgatagtcttagtaatcaactggcagaatatgcagactgggagaacacaggggaagcttctgcaggtgctacccgaggcatctcagtgccgatgactcctcacaaggcaagagctgctggctttacgttgggtgcacctgctgtggacagaggaggaacgcaacagtctcctaagcagacaccaagaacaggagaatcaaggaaagcaatagatgacttttcccaaggagactcaataagaagttctgaaaaagagggcagtaacgacagttggcatacttctgaggaagaagaactggattttacacccaagaagccacagaagccaaacttgacaatgttaatgaatgtttccaaaaagttcaggaatatcgttggtggtgatagttctagaattgaaagtcctaagtcacagaagaaaagccttcaacaaaaagaaccaacagatgcaaacctgaacaaaggagaatgtggagagttgttgaatcaagatgtctcagattcaagcaaccttgaggaagatgaattggaggaagaggaagaagaggaggaagatgaaaatgatgatggagatgatgatgaggagtatgaagaagaagaagaggaagatcttactccagatgaaaaggaggaagaagatctggaagatgaagaaactcaatctaatgacataatggaagaggagcagagaggtaaaatagaacctaaggaagaaattaatcagaacttggagtatcttagtaatgttaagaatgaaggggatgcacaatgtggagctggaagtgtctccagtgattaccagaaaacatgtaaaaaaactgatgaaaagatggaggaatctgttgatactcctgtgtcttttatagatgggtgttatgaaaggttgcaagagaacataacagccatgtctccaaagagaatgaataatgaagtatcttacgagtcagtaccaaaacaagctgtccttcaaaatctaaataatttgcaagataaacaagaaagctgcaacaagaaaagcatgatacagaagctgtttcacagaaatacagcctcctgttttgcagactctgaaatgacagacttgaaaaaagagatacctcagcctctctcaaatagtggtgatcttcaggaggagaagttaagtttcagtgatggcttcaagagtagtagtggttcttggtcagcagcagaaaacataaagcttgaaaatcaaagaccaagctctgtcacggatgatgaagatactgaagaagggcagtataaagaagtagataataaagtccatgaagcactgaaacaagaaggtgaaaacctgtgcctaaatagatgtgaggaaaatctaagggcaacattttcctcaagcacaaaagaagagtcacctaaatgggaagaagaggaagaacaggagaaggaagatactggtgagaagctacagactacagtttttgagggtgtgaaaaattctgtttgtagtattaaccatcaagtccataatgcttcagaagacactgctaatgagagaagtactctgccagcaataggagcacagcaagagaaagagtctgaatctccctgggattctgagatggattctgaaagtctgaggaaagcgtcacctggtgtgttgctcccagctgcagatgaacacggagtatgcttgcagaatatttcaggggaacacaacaatggcttttcagagaaacccagtaatttgcagttgaaggtttctgcatcacttttagagatgaatgaaacatctccaaaaaaggaagggcagaaatcagatctacgggaggaattgagtttaggagatgtagacgatatagaaggtgagtgctcagaatctgtctttcatgtgccgtcatcagctgaaaaagggatggtcaaggatgccattgaaaactatgggagacaggataaatgtgttttagaaactaccagcttgatagaaaagacagcatatgaaaagcagactgacaaagcagaaatttctcatcaggaaaccctaggagaaaatgaggaatcccacagtgctgacaagcagttaagtctaaagccgtgggaagaaagatatgaaagaatgtgggttgaaaaagagaaaagggagttgaaaacaaattttaaaaacattacagcagagctgaagcagctgtttggtgaaattaatgaatctgagaaagctacatcccttgtggcagaagtgtcagaagatgacttcaatgaagaattgaagagttttcgtgtttcatcttgtgcgacagaatcaagtaataagttagaaagtaaaggtgaatttggagacatgaaacttaacgtagacctgaaagagcccaaaacggaaattgtaattccgagtctcggtgtccttcctgatcacaataacttaaatgcaaacgtggaaaatacctggagtacagatgaagaagactgcactaattacacagataatacaaatgtacctctagcaaaaggagaggaaatggaagaaaatgagaatgggattagtaagagtgtagagggaagtcctgaatattccccgagatattgtttaaaaacaaatattttggatgacatttctaatattcttcctaaagtaagacctatttccacaaatgatggaagtacacttgattttataagagagaagaaatttggcaaggacgtctgtcttagtgacagtgtttccagagactgcttcatcaaaaacaaggaaataggagaaaaagaaattgaaaatctttttccacatgctcagcaaccttgtggcatgctgaaaaggaatctggatgaagaattaaaacaagatgtggaaagatttaagagtaaggtaggaatgctgcaaatggtattcctggctttggagaaagagaaggtacagctacaaaaagaggttgagaaagaaaaaaggaagcagaaacatttcaaagtgcaagcagtggagaaacaggaaggccttgataaattaaatacaccagcaggcaatattaccaatcaaccagtaaaagaaaagcttgctctaaggaagaatgaaaaaatgacagaagaaaaacacacaaagaatttttcatctgaggagagaccaaaattagttgaaatgccaataaaaggtaaatctgttctgaatgcaaaaggtatgaagaaaaatgagaagaaaaggcagtcttcaaagcagagggctaatcggaagattcaattaatggatgatagcactttcagtgaaacatctcaagatgaagaaagacctgcaacaaaaacagggagtgaaaagaacaagggcagcatgcaaatggatgttactgatgaccttgatttaacacagtcatctgatacaactacagaggatgctgagttgccaacttcaacttacaaagaagctatgttgctgtttgaacagcttagtgtggatcatacagattctgctattttgctgaaaattcaaaacatacttcttgaatatgaacagataatagattgtgaaaaaaaacgctatacagctctctggagagaagtcaaaaagttggaaagtgaaaaagaggagtcacagttaatagcagaagagactcaagatttgaaatccatattggctcaccaagaaatggaattgaaaagtgatatccaaagccttaaattttctttgaaacaagaagaggaaaagaggcttagagctgaaatgcaatatgaaaaaatgagagaacaactaaggaggaaagaggatcaatattgtagagaaacagaggagagacaacaacttgagttgcatgcaaggaatttagaaacagagttaataacgctgagaaagctcatgaaacagattgaagaagagcgtgatgaaacacagagacagctctctcaggaaaagagtgctagagctcttcaagaaggaattctgaacagccacctgtggagacagaaggaactggaagaagaaacaagaaaaactataggaaaaaattcagaggaatctgacactaatgacagagaaaaggatctgctgcacagaaatcagttactgcaagaagagattgctatgctaaggctggaacttgatcaagtaaaacttaggcaccaggagaatgaaggaaaatatttagaggaaaatgagtctttgaaagaaaaaaatgacgaccttcagaaggaacttaaactgaatgaggaagccttaacacaaacagtacttcagtacaatggacagctgaatttactcaagacagaatctgcaatgctaacttccaagcttgaacagacgaaagaaagcaaagacagactggaaacagagattgaatcattccgttcccgcttgaatgcggctgttcaagatcttgaacgtcatcagtcattgaaaagtgatgtcgaacgaacatttcagagagaacgtgatgaatggcttcgtttacaagacaagctccattgtgagctctctgatgtgcgggagaccaacaagagcttgtctcagcagctgagtaaaatggaaagtaaagctaatagtctagaaaatgagcttcaccagtttaaacaaacgcttcgagaaaaaacactgcttttagaaatgacacaaaaagacttaaatcaagcccagtgtcaggcaaaagaaagtgatcatgcacggcaacttgagaaagatcaagtcagcaaatttatgataaagcaggaatctatgcaggaacgattggcccagctccaaagtgaaaaccttttactccgtcagcagctggaagatatgcagaacaagggaatcatcaaagaaaaggttgtgaatgatgtccaggacaaatttaatgatattttcaacaaactcagagctgatactgaaaagcaagtttacctcatggaagagagaaacaaggaattaaataccaagtgtactgatttaagggaacaagtctttaaatatgaaactgacaaagtagaaagagagggtatggtcagacagctacagcaggagcttgctgatgctcttaaaaagcagtctatgtcagaagcttcccttgaagttactacacgctaccgcagtgaccttgaggaagacaaattgcgcttgcaaaaggaattggacagggttaaaaccaagttacaggaatctgaagaacagcgtattcagtctgagcattgtgttcatgacttgaagactgtcctagataataaggaaagagaagtatcagcttcttcccagaaactgcaagaccttctgttagcaacttctggaaccaatactactataaaacaactggaagaacatgtacaacgacttgaaattgaaaatgccagattggaagccgcagccaaacaacaaaccaatagaattgaagctcttcagaaggacctgcaagcctcaacctcagttcataatcgactagaggacttgataactggcttacggacagcacagacagctgcagaagaataccaacatcagcagatgcaaaagcagaatatgttggctatgacatcaaaagactcacgcaatatgtgggaggaagaactgaagtcaagagcccaccttgaagatcgtcttgctcaacttgatagggaaaaggctgagctcttggaacagtgtgagagtgaaagaaagaaagtgaagaagctggtagagttgaaacgaccagttgaagcacgtcttgaccaggaaatgaaaagaaatattgaactgcagaaagaatgtcacaggtgcaagaggcttctgaacagagctgtgaagaaactaaggatgtatgaggccagagaaagagagtcccaatttaatttccagggagaaatgaagaacaggtattctgaaatggtgaatgaagttggcaaattaagaacaaaggttactgaactttctcagcagctggagttagagtctaaaaaatgcatccagctggaagcacaaaaccaggatttgcgagaagagctgtctgctctgcgtgagaaccatgaaaaactggagaagagcaaatgccagctgaaggaagaggtggcaaacctcagacatcatttggaggctaatatggtgaaccacagccaaatagaacagtacaagaaagagatggaagaacgagcaggacaagaaatcagacaaaaactacaagaagtcaatttgtttttgcagacacaggcagcctcccaggacaggttagaacaaatcagagccaatcatcatgcctcactgagaaaccaactaaagcacagaattaaagatctcgaatgtgagttggacagaataaaaaatactcaacaggacagtatttttcaaaaagaatccacgcaggctgaagtggaaaaatacaaagaaatgtatctggaagaaatgaaaattagaagaagcctagcaaataagctggaaagagccaatgagagactagcagaagccaatgctaagctccttcaggagcgccacagaagcaaatctttaattgcaagtagcattgtcactggaggtctgtctgcaaatccagttctgtattcaactgaactgggacatcttggcaacaatttggcactgaacagaagtctcagcctaggaggaagcttcctaggcacagctgggaatgcgttatcatcaagaaacaaggttgaagcctacatggctaagatacggaaggaactggatgaaaaaatcactaaagaacttgaacaagccactgctgaacttgaaactggatctgctggagcttctccaatggtatctactgatggatcttcaagaaatctcaatgttgaccaggatcccctttgcagagcaatacaggagtaccgtgatgttttaaccaaaaattatctgatctaaacaaaaattcaaagggagaagtactggaaatcattttgtttacataggatgtctatgatttcccatcctgcagcttagatgtggaaacatctttattgcagtttgaatataaattctaaatgtattaaataggtgtcaagcactctgcacttacctgttggtcactgaggtatagttggtttattttgcactcagaataagaaccatatctattttttgttactatcagattgagtaatgttgattcttgagcttgacagaactgtcaaaatgtttttgatgcattattttgctccgctcgtgttccatgttttaacaaaagcattccctttgttctgtttaaccctttcactgtttgtgttagtgtttccagtgttattttagtgcacaggaggttatttgtttggctttctgccagctgtttcagtcctgatgctatgaatatttctgctgattaagtgaaagttttaccagtgtttaagctggagaagaatgcactttacattgctgtcactgttacgcaccttgggtttaaaaatactgtgagtgtgtagtagtgccaagaaagctttaatgtgatctttttgatatctttggtttggtatccatgttggattttgcattagaatttgattcaacttaagacattcatagctgctagatcaacccgtgatgaacctgaagctgttcatacggggaagaaggaaaagtaatatttcaaccttccatccaattggtacttaacactatttgtgggatgagacaactttttgttgctgctaacagctggtgatacggtagctgcaactcaggtgaagggtaatgctgtgggacttcatgtctataagacaagcagtttcgctaatgtcaggaagttatgtgttactgaagatctgcagtagtcattccttgtctacaaaatttgctaaaatattacacaacaaataaagtcaacattccagagacatgagaatggctatactgaggcaaacagaaactggaagaaaagatttttacccactaatttgacaacttgagttaacaagcagtgaggagatgaaatgaatgttgctgcaactctccgctcctttttatatgaacacagttttgtgacaataatacactgtatttaatcccaggtattatgttccaacttggtatttaataaactttcatatctagta
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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