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2026-01-19 00:17:50, GGRNA.v2 : RefSeq release 232 (Sep, 2025)

LOCUS       XM_051827406            2245 bp    mRNA    linear   MAM 28-NOV-2024
DEFINITION  PREDICTED: Oryctolagus cuniculus TGFB induced factor homeobox 2
            like X-linked (TGIF2LX), mRNA.
ACCESSION   XM_051827406
VERSION     XM_051827406.2
DBLINK      BioProject: PRJNA1178637
KEYWORDS    RefSeq.
SOURCE      Oryctolagus cuniculus (rabbit)
  ORGANISM  Oryctolagus cuniculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha;
            Leporidae; Oryctolagus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091453) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Nov 28, 2024 this sequence version replaced XM_051827406.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_964237555.1-RS_2024_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Oryctolagus cuniculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:9986"
                     /chromosome="X"
     gene            1..2245
                     /gene="TGIF2LX"
                     /note="TGFB induced factor homeobox 2 like X-linked;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:100358646"
     CDS             67..711
                     /gene="TGIF2LX"
                     /codon_start=1
                     /product="homeobox protein TGIF2LX"
                     /protein_id="XP_051683366.1"
                     /db_xref="GeneID:100358646"
                     /translation="
MEAAEKPEKTGCPAQDPSMSWRNKRKGKGYLPAKSVRILRHWLYDHRFDAHPSEAEKQMLSGQTNLSLQQISNWFINARRRILPKMLVVEGNDPKCQTGKATDIVYQLSTDPLVQATLGPQNPNKIQDLSLSSLPEGQESEAKLPNPELAPRRRFTLEVPAEKKFEISTSESLSSPELMPPEEYEDFSSFLILVDVAVRKAAELELQKAQNNNP"
     misc_feature    193..309
                     /gene="TGIF2LX"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      
acggcttgcgtaggcgtttgcctgagagctacagatcccaagaccataaagacagatctgaggaacatggaagctgctgagaagccggagaagaccggatgcccagctcaagacccttccatgtcttggagaaacaagaggaagggtaaagggtacctgcccgcaaagtctgtgagaatcctccgccactggctctatgatcacaggtttgatgcacatccctcagaagccgagaaacaaatgctgtcggggcaaaccaatttgtctttacaacagatctcaaactggtttattaatgctcgcagacgcattcttccgaaaatgctcgtagtggagggaaacgatcccaaatgccaaacaggcaaggccaccgatatagtgtatcagctgagcactgatccactcgtgcaagccacgttggggccccaaaatccaaacaagatacaagacctatctctgagctccttgccagagggccaggaatcggaagcgaagctaccgaatccagagttggctccacgcaggaggttcaccctggaagtccctgcggagaaaaagttcgagatttccaccagtgagtctttgtcttctccagaactgatgccaccagaggagtacgaggacttcagcagcttcctgatcctggttgatgtagccgtgcggaaggctgctgaactggagctacagaaagcgcaaaacaataatccataattgtccatgtcctggaaaaatctaagtatcgttccttcgtctgtctgtgtggtaggcacttttttgtgtgcgccgccactgttttgtgtgtctaccttttacagagatatcttccagggggtctgtgagaactgttgctaactattgagactctattagatgtttcattctttccagatagaagacactaaccatcgtgattaacactgtagcgaagatctttatttgttctccttcctcctaggtttaaattcttcagtcaggctaatactctgaaattagacaccatgctgagactggagaaaataatggtttttgtttgtttgtttgtttgtttggcttacctggccaaatttctttgtgcctgtgccggcagtattacagataccaaatgagtcatcttttctctctctccctgtaagtttccttattagcatcaatgatggcaaggaaaggcgctataaaagacaggtgttaccagcactggcctcattttaaagtttgagtttttgtaaaatttcaattgtgttgctctttttacagtttgactgttttaaggagtagttaatctctgcaggggactacacatgacagccaaagtatagtgaattcacccacatttgtcacataggctgaactttttttgagtgaaccagtgagaagttttcagtaaagaaaaaaacattccaaaaggtatttttctgctgttggttgttgcttacttggtttagagaatacttttcgttggtttggttttaatcatctacatcagatgaagaagataatcataataaaatctaaaaagcagaaaactgacaaaattccctgaagaaaccagagggagataatttgaaaagaaaaaaaaaaaaaaggaatgaatctataacatgttagcaaaaaagaaagtaaactcgttttgttttgacctttctaatacattttcttttttcttttaaaacgtttagattcataggagcggagctgggaatgcggaaagctacgggaagctcccacgtgaaaataatcttgtcttataaaggcaacttttcctacagcctcagcacaggagtattttcaatgggaacagatagatatttctccagaaagctgtaatttagctttctgattttagagagttaaaacctgaggaatatgtagcttgtaattaaaccagactcttagcctcatttcatcctcctgccttcaaatgaaataggttgtgtttgatctctacttctaggcccaatcttttttttttttttttacattgctatctactgactgacacttctcaatccaagataccatatcttctttaagcatttcagagcaatagtcaggttattgctctgtataagttttcatgtaaccaggaaggaaacgaggtccaccataccaaactgctattcgtgagagagactaaagtgaaaatgagttcaggtttttaaggtaggtgcggattagggaggatttagaagctaaaaagacagtagcattcattgtaaccttactgatgtgggccccttaaagactc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]