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Previous release (v1)
2025-11-14 17:09:22, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_043328844 567 bp mRNA linear PLN 27-AUG-2021
DEFINITION Rhizoctonia solani Lytic polysaccharide mono-oxygenase,
cellulose-degrading (RhiXN_09028), partial mRNA.
ACCESSION XM_043328844
VERSION XM_043328844.1
DBLINK BioProject: PRJNA727464
BioSample: SAMN14572378
KEYWORDS RefSeq.
SOURCE Rhizoctonia solani
ORGANISM Rhizoctonia solani
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
Agaricomycetes; Cantharellales; Ceratobasidiaceae; Rhizoctonia.
REFERENCE 1 (bases 1 to 567)
AUTHORS Li,C. and Chen,X.
TITLE Evolutionary and genomic comparisons of hybrid uninucleate and
nonhybrid Rhizoctonia fungi
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 567)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2021) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 567)
AUTHORS Li,C. and Chen,X.
TITLE Direct Submission
JOURNAL Submitted (18-MAY-2020) Department of Plant Pathology, China
Agricultural University, Yuanmingyuan Xilu 2, Beijing 100193, China
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_057374).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..567
/organism="Rhizoctonia solani"
/mol_type="mRNA"
/strain="AG-1 IA"
/isolate="XN"
/isolation_source="maize"
/db_xref="taxon:456999"
/chromosome="5"
/collection_date="2014"
/collected_by="CAU"
gene <1..>567
/locus_tag="RhiXN_09028"
/db_xref="GeneID:67031307"
CDS 1..567
/locus_tag="RhiXN_09028"
/codon_start=1
/product="Lytic polysaccharide mono-oxygenase,
cellulose-degrading"
/protein_id="XP_043180290.1"
/db_xref="GeneID:67031307"
/translation="
MRFLAGLLTLATLASSVVAHGIVTQPPTRTLGSAMIAACGEGAVSAQKSNVKGPIESQIAKIDSNYKPAQCNLFLCRGQQFADNKDKVQTYKTGQVVNIVLDIENHHPVGYANVSVIDTATNKMVGKPLIAWDPYFTGYPYPKDQENFNVTIPELSGKCKTAGECVLQYHWYSRTDRQTYQNCVDFVV"
misc_feature 58..558
/locus_tag="RhiXN_09028"
/note="Lytic polysaccharide mono-oxygenase,
cellulose-degrading; Region: LPMO_10; pfam03067"
/db_xref="CDD:460793"
ORIGIN
atgcgcttcctggctggtttattgactttggcgactttggcgtcgtccgttgtcgctcatggcattgtaactcaacctccaactcgcacactcgggagtgccatgattgcagcttgcggtgaaggtgctgtctcggctcaaaaatccaatgtcaagggaccgattgaaagccagattgccaagattgattccaactacaagcccgcgcaatgcaatctcttcttgtgccgtggccaacagtttgctgacaacaaggacaaagtccaaacctacaagactggtcaagtcgtgaacattgtactagacattgagaaccaccatcctgttggctatgcaaacgtatctgttatcgatactgccacaaacaagatggttggcaagcctctgattgcatgggatccttactttactggttatccgtaccctaaggatcaagagaacttcaacgtcactattccagagctcagcggcaaatgcaagactgccggagaatgtgttctacaataccactggtactcccgaacggacaggcagacttaccaaaactgcgtagatttcgttgtttga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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