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Previous release (v1)
2026-10-05 19:55:22, GGRNA : RefSeq release 233 (Jan, 2026)
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I., Wang,W., Longo,D.L., Schlessinger,D. and Ko,M.S. TITLE Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors JOURNAL Cell Stem Cell 5 (4), 420-433 (2009) PUBMED 19796622 REFERENCE 2 (bases 1 to 1530) AUTHORS Yanagihara,M., Ishikawa,S., Naito,M., Nakajima,J., Aburatani,H. and Hatakeyama,M. TITLE Paired-like homeoprotein ESXR1 acts as a sequence-specific transcriptional repressor of the human K-ras gene JOURNAL Oncogene 24 (38), 5878-5887 (2005) PUBMED 15897875 REFERENCE 3 (bases 1 to 1530) AUTHORS Ozawa,H., Ashizawa,S., Naito,M.,...
inference="alignment:Splign:2.1.0" exon 790..888 /gene="Ccng2" /inference="alignment:Splign:2.1.0" exon 889..1094 /gene="Ccng2" /inference="alignment:Splign:2.1.0" exon 1095..2472 /gene="Ccng2" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 2506) AUTHORS Ohno S, Ikeda JI, Naito Y, Okuzaki D, Sasakura T, Fukushima K, Nishikawa Y, Ota K, Kato Y, Wang M, Torigata K, Kasama T, Uchihashi T, Miura D, Yabuta N, Morii E and Nojima H. TITLE Comprehensive phenotypic analysis of knockout mice deficient in cyclin G1 and cyclin G2 JOURNAL Sci Rep 6, 39091 (2016) PUBMED 27982046...
db_xref="CDD:462527" misc_feature 2386..2778 /gene="Rmi1" /gene_synonym="RGD1310671" /note="Recq-mediated genome instability protein 1, C-terminal OB-fold; Region: RMI1_C; pfam16099" /db_xref="CDD:465021" ORIGIN // REFERENCE 1 (bases 1 to 3101) AUTHORS Suwa,A., Yoshino,M., Yamazaki,C., Naitou,M., Fujikawa,R., Matsumoto,S., Kurama,T., Shimokawa,T. and Aramori,I. TITLE RMI1 deficiency in mice protects from diet and genetic-induced obesity JOURNAL FEBS J 277 (3), 677-686 (2010) PUBMED 20050919...
db_xref="CDD:462527" misc_feature 1790..2182 /gene="Rmi1" /gene_synonym="RGD1310671" /note="Recq-mediated genome instability protein 1, C-terminal OB-fold; Region: RMI1_C; pfam16099" /db_xref="CDD:465021" ORIGIN // REFERENCE 1 (bases 1 to 2505) AUTHORS Suwa,A., Yoshino,M., Yamazaki,C., Naitou,M., Fujikawa,R., Matsumoto,S., Kurama,T., Shimokawa,T. and Aramori,I. TITLE RMI1 deficiency in mice protects from diet and genetic-induced obesity JOURNAL FEBS J 277 (3), 677-686 (2010) PUBMED 20050919...
N., Hara,M.R., Juluri,K.R., Nguyen,J.V., Snowman,A.M., Law,L., Hester,L.D. and Snyder,S.H. TITLE GAPDH mediates nitrosylation of nuclear proteins JOURNAL Nat Cell Biol 12 (11), 1094-1100 (2010) PUBMED 20972425 REFERENCE 2 (bases 1 to 1286) AUTHORS Baba,T., Kobayashi,H., Kawasaki,H., Mineki,R., Naito,H. and Ohmori,D. TITLE Glyceraldehyde-3-phosphate dehydrogenase interacts with phosphorylated Akt resulting from increased blood glucose in rat cardiac muscle JOURNAL FEBS Lett 584 (13), 2796-2800 (2010) PUBMED 20488185 REFERENCE 3 (bases 1 to 1286) AUTHORS Sen,N., Hara,M.R., Ahmad,A.S., Cascio,M.B...
inference="alignment:Splign:2.1.0" exon 3881..3999 /gene="Itprid2" /gene_synonym="Ssfa2" /inference="alignment:Splign:2.1.0" exon 4000..5206 /gene="Itprid2" /gene_synonym="Ssfa2" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 5206) AUTHORS Inokuchi J, Komiya M, Baba I, Naito S, Sasazuki T and Shirasawa S. TITLE Deregulated expression of KRAP, a novel gene encoding actin-interacting protein, in human colon cancer cells JOURNAL J Hum Genet 49 (1), 46-52 (2004) PUBMED 14673706...
S., Sugimura,T., Serikawa,T. and Ushijima,T. TITLE Sparse and wavy hair: a new model for hypoplasia of hair follicle and mammary glands on rat chromosome 17 JOURNAL J Hered 96 (4), 339-345 (2005) PUBMED 15829729 REFERENCE 5 (bases 1 to 4882) AUTHORS Ohazama,A., Courtney,J.M., Tucker,A.S., Naito,A., Tanaka,S., Inoue,J. and Sharpe,P.T. TITLE Traf6 is essential for murine tooth cusp morphogenesis JOURNAL Dev Dyn 229 (1), 131-135 (2004) PUBMED 14699584 REFERENCE 6 (bases 1 to 4882) AUTHORS Crocker,M. and Cattanach,B.M. TITLE The genetics of Sleek: a possible regulatory mutation of the tabby-...
VIRMA mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation JOURNAL Cell Discov 4, 10 (2018) PUBMED 29507755 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 1620) AUTHORS Horiuchi K, Kawamura T, Iwanari H, Ohashi R, Naito M, Kodama T and Hamakubo T. TITLE Identification of Wilms' tumor 1-associating protein complex and its role in alternative splicing and the cell cycle JOURNAL J Biol Chem 288 (46), 33292-33302 (2013) PUBMED 24100041 REFERENCE 7 (bases 1 to 1620) AUTHORS Ahmed F, Torrado M, Zinovieva RD, Senatorov...
VIRMA mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation JOURNAL Cell Discov 4, 10 (2018) PUBMED 29507755 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 1686) AUTHORS Horiuchi K, Kawamura T, Iwanari H, Ohashi R, Naito M, Kodama T and Hamakubo T. TITLE Identification of Wilms' tumor 1-associating protein complex and its role in alternative splicing and the cell cycle JOURNAL J Biol Chem 288 (46), 33292-33302 (2013) PUBMED 24100041 REFERENCE 7 (bases 1 to 1686) AUTHORS Ahmed F, Torrado M, Zinovieva RD, Senatorov...
These results advance the knowledge of cell cycle regulators effects in tubular restoration and/or degeneration, and the cyclin b2 and CDC2 molecules are suggested to be a marker for the proliferation of proximal tubular cells in kidney failure. REFERENCE 4 (bases 1 to 1520) AUTHORS Kuroda,T., Naito,K., Sugiura,K., Yamashita,M., Takakura,I. and Tojo,H. TITLE Analysis of the roles of cyclin B1 and cyclin B2 in porcine oocyte maturation by inhibiting synthesis with antisense RNA injection JOURNAL Biol Reprod 70 (1), 154-159 (2004) PUBMED 12954723 REFERENCE 5 (bases 1 to 1520) AUTHORS Brandeis,M...
exon 616..741 /gene="Mnat1" /inference="alignment:Splign:2.1.0" exon 742..863 /gene="Mnat1" /inference="alignment:Splign:2.1.0" exon 864..1302 /gene="Mnat1" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 1334) AUTHORS Fujii,W., Nishimura,T., Kano,K., Sugiura,K. and Naito,K. TITLE CDK7 and CCNH are components of CDK-activating kinase and are required for meiotic progression of pig oocytes JOURNAL Biol Reprod 85 (6), 1124-1132 (2011) PUBMED 21778139 REFERENCE 2 (bases 1 to 1334) AUTHORS Egly,J.M. and Coin,F. TITLE A history of TFIIH: two decades of molecular biology on a...
N, Hagos S, Alshahid M, Meyer BF, Morahan G and Dzimiri N. TITLE A common variant association study in ethnic Saudi Arabs reveals novel susceptibility loci for hypertriglyceridemia JOURNAL Clin Genet 91 (3), 371-378 (2017) PUBMED 27599772 REFERENCE 2 (bases 1 to 1972) AUTHORS Satoh T, Kidoya H, Naito H, Yamamoto M, Takemura N, Nakagawa K, Yoshioka Y, Morii E, Takakura N, Takeuchi O and Akira S. TITLE Critical role of Trib1 in differentiation of tissue-resident M2-like macrophages JOURNAL Nature 495 (7442), 524-528 (2013) PUBMED 23515163 REFERENCE 3 (bases 1 to 1972) AUTHORS Dedhia PH, Keeshan...
gene="Tro" /inference="alignment:Splign:2.1.0" exon 1908..5419 /gene="Tro" /inference="alignment:Splign:2.1.0" exon 5420..5630 /gene="Tro" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 5630) AUTHORS Saburi,S., Nadano,D., Akama,T.O., Hirama,K., Yamanouchi,K., Naito,K., Tojo,H., Tachi,C. and Fukuda,M.N. TITLE The trophinin gene encodes a novel group of MAGE proteins, magphinins, and regulates cell proliferation during gametogenesis in the mouse JOURNAL J Biol Chem 276 (52), 49378-49389 (2001) PUBMED 11590179...
and Nagai,R. TITLE Kruppel-like zinc-finger transcription factor KLF5/BTEB2 is a target for angiotensin II signaling and an essential regulator of cardiovascular remodeling JOURNAL Nat Med 8 (8), 856-863 (2002) PUBMED 12101409 REFERENCE 5 (bases 1 to 6587) AUTHORS Nagai,N., Nakano,K., Sado,Y., Naito,I., Gunduz,M., Tsujigiwa,H., Nagatsuka,H., Ninomiya,Y. and Siar,C.H. TITLE Localization of type IV collagen a 1 to a 6 chains in basement membrane during mouse molar germ development JOURNAL Int J Dev Biol 45 (7), 827-831 (2001) PUBMED 11732842 REFERENCE 6 (bases 1 to 6587) AUTHORS Bhatt,R.S.,...
mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation JOURNAL Cell Discov 4, 10 (2018) PUBMED 29507755 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 2028) AUTHORS Horiuchi,K., Kawamura,T., Iwanari,H., Ohashi,R., Naito,M., Kodama,T. and Hamakubo,T. TITLE Identification of Wilms' tumor 1-associating protein complex and its role in alternative splicing and the cell cycle JOURNAL J Biol Chem 288 (46), 33292-33302 (2013) PUBMED 24100041 REFERENCE 7 (bases 1 to 2028) AUTHORS Ahmed,F., Torrado,M., Zinovieva,R.D.,...
PUBMED 24453340 REMARK GeneRIF: Bclaf1 facilitates the differentiation of early retinal precursors into retinal ganglion cells, amacrine cells, and horizontal cells rather than into cone photoreceptors. REFERENCE 2 (bases 1 to 3230) AUTHORS Horiuchi,K., Kawamura,T., Iwanari,H., Ohashi,R., Naito,M., Kodama,T. and Hamakubo,T. TITLE Identification of Wilms' tumor 1-associating protein complex and its role in alternative splicing and the cell cycle JOURNAL J Biol Chem 288 (46), 33292-33302 (2013) PUBMED 24100041 REFERENCE 3 (bases 1 to 3230) AUTHORS Baltz,A.G., Munschauer,M., Schwanhausser,B.,...
K., Jesneck,J.L. and Raffel,G.D. TITLE Ott1 (Rbm15) regulates thrombopoietin response in hematopoietic stem cells through alternative splicing of c-Mpl JOURNAL Blood 125 (6), 941-948 (2015) PUBMED 25468569 REFERENCE 4 (bases 1 to 4630) AUTHORS Horiuchi,K., Kawamura,T., Iwanari,H., Ohashi,R., Naito,M., Kodama,T. and Hamakubo,T. TITLE Identification of Wilms' tumor 1-associating protein complex and its role in alternative splicing and the cell cycle JOURNAL J Biol Chem 288 (46), 33292-33302 (2013) PUBMED 24100041 REFERENCE 5 (bases 1 to 4630) AUTHORS Baltz,A.G., Munschauer,M., Schwanhausser,B.,...
Growth JOURNAL J Biol Chem 291 (42), 21869-21879 (2016) PUBMED 27539851 REFERENCE 3 (bases 1 to 3595) AUTHORS Sakakibara,I., Fujino,T., Ishii,M., Tanaka,T., Shimosawa,T., Miura,S., Zhang,W., Tokutake,Y., Yamamoto,J., Awano,M., Iwasaki,S., Motoike,T., Okamura,M., Inagaki,T., Kita,K., Ezaki,O., Naito,M., Kuwaki,T., Chohnan,S., Yamamoto,T.T., Hammer,R.E., Kodama,T., Yanagisawa,M. and Sakai,J. TITLE Fasting-induced hypothermia and reduced energy production in mice lacking acetyl-CoA synthetase 2 JOURNAL Cell Metab 9 (2), 191-202 (2009) PUBMED 19187775 REFERENCE 4 (bases 1 to 3595) AUTHORS Watkins,...
Splign:2.1.0" exon 2945..3502 /gene="Rasal3" /gene_synonym="RGD1309019" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 3502) AUTHORS Saito,S., Kawamura,T., Higuchi,M., Kobayashi,T., Yoshita-Takahashi,M., Yamazaki,M., Abe,M., Sakimura,K., Kanda,Y., Kawamura,H., Jiang,S., Naito,M., Yoshizaki,T., Takahashi,M. and Fujii,M. TITLE RASAL3, a novel hematopoietic RasGAP protein, regulates the number and functions of NKT cells JOURNAL Eur J Immunol 45 (5), 1512-1523 (2015) PUBMED 25652366 REFERENCE 2 (bases 1 to 3502) AUTHORS Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J.,...
Splign:2.1.0" exon 3078..3635 /gene="Rasal3" /gene_synonym="RGD1309019" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 3635) AUTHORS Saito,S., Kawamura,T., Higuchi,M., Kobayashi,T., Yoshita-Takahashi,M., Yamazaki,M., Abe,M., Sakimura,K., Kanda,Y., Kawamura,H., Jiang,S., Naito,M., Yoshizaki,T., Takahashi,M. and Fujii,M. TITLE RASAL3, a novel hematopoietic RasGAP protein, regulates the number and functions of NKT cells JOURNAL Eur J Immunol 45 (5), 1512-1523 (2015) PUBMED 25652366 REFERENCE 2 (bases 1 to 3635) AUTHORS Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J.,...
and intellectual disability JOURNAL Eur J Hum Genet 27 (2), 278-290 (2019) PUBMED 30291340 REFERENCE 3 (bases 1 to 3026) AUTHORS Shiga,Y., Akiyama,M., Nishiguchi,K.M., Sato,K., Shimozawa,N., Takahashi,A., Momozawa,Y., Hirata,M., Matsuda,K., Yamaji,T., Iwasaki,M., Tsugane,S., Oze,I., Mikami,H., Naito,M., Wakai,K., Yoshikawa,M., Miyake,M., Yamashiro,K., Kashiwagi,K., Iwata,T., Mabuchi,F., Takamoto,M., Ozaki,M., Kawase,K., Aihara,M., Araie,M., Yamamoto,T., Kiuchi,Y., Nakamura,M., Ikeda,Y., Sonoda,K.H., Ishibashi,T., Nitta,K., Iwase,A., Shirato,S., Oka,Y., Satoh,M., Sasaki,M., Fuse,N., Suzuki,Y.,...
mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation JOURNAL Cell Discov 4, 10 (2018) PUBMED 29507755 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 6199) AUTHORS Horiuchi,K., Kawamura,T., Iwanari,H., Ohashi,R., Naito,M., Kodama,T. and Hamakubo,T. TITLE Identification of Wilms' tumor 1-associating protein complex and its role in alternative splicing and the cell cycle JOURNAL J Biol Chem 288 (46), 33292-33302 (2013) PUBMED 24100041 REFERENCE 4 (bases 1 to 6199) AUTHORS Baltz,A.G., Munschauer,M., Schwanhausser,B...
T., Sinozaki,N., Minami,S., Yamaguchi,H., Asai,S., Takahashi,Y., Yamaji,K., Takahashi,K., Fujioka,T., Takata,R., Yanai,H., Masumoto,A., Koretsune,Y., Kutsumi,H., Higashiyama,M., Murayama,S., Minegishi,N., Suzuki,K., Tanno,K., Shimizu,A., Yamaji,T., Iwasaki,M., Sawada,N., Uemura,H., Tanaka,K., Naito,M., Sasaki,M., Wakai,K., Tsugane,S., Yamamoto,M., Yamamoto,K., Murakami,Y., Nakamura,Y., Raychaudhuri,S., Inazawa,J., Yamauchi,T., Kadowaki,T., Kubo,M. and Kamatani,Y. TITLE Large-scale genome-wide association study in a Japanese population identifies novel susceptibility loci across different...
T., Sinozaki,N., Minami,S., Yamaguchi,H., Asai,S., Takahashi,Y., Yamaji,K., Takahashi,K., Fujioka,T., Takata,R., Yanai,H., Masumoto,A., Koretsune,Y., Kutsumi,H., Higashiyama,M., Murayama,S., Minegishi,N., Suzuki,K., Tanno,K., Shimizu,A., Yamaji,T., Iwasaki,M., Sawada,N., Uemura,H., Tanaka,K., Naito,M., Sasaki,M., Wakai,K., Tsugane,S., Yamamoto,M., Yamamoto,K., Murakami,Y., Nakamura,Y., Raychaudhuri,S., Inazawa,J., Yamauchi,T., Kadowaki,T., Kubo,M. and Kamatani,Y. TITLE Large-scale genome-wide association study in a Japanese population identifies novel susceptibility loci across different...
dependent phosphorylation of syntaxin-1A by the death-associated protein (DAP) kinase regulates its interaction with Munc18 JOURNAL J Biol Chem 278 (28), 26265-26274 (2003) PUBMED 12730201 REFERENCE 7 (bases 1 to 5878) AUTHORS Tada,Y., Wada,M., Taguchi,K., Mochida,Y., Kinugawa,N., Tsuneyoshi,M., Naito,S. and Kuwano,M. TITLE The association of death-associated protein kinase hypermethylation with early recurrence in superficial bladder cancers JOURNAL Cancer Res 62 (14), 4048-4053 (2002) PUBMED 12124340 REFERENCE 8 (bases 1 to 5878) AUTHORS Jin,Y., Blue,E.K., Dixon,S., Hou,L., Wysolmerski,R.B....
Human apolipoprotein E receptor 2. A novel lipoprotein receptor of the low density lipoprotein receptor family predominantly expressed in brain JOURNAL J Biol Chem 271 (14), 8373-8380 (1996) PUBMED 8626535 REFERENCE 10 (bases 1 to 7570) AUTHORS Kinoshita,M., Teramoto,T., Kato,H., Hashimoto,Y., Naito,C., Toda,G. and Oka,H. TITLE Partial purification of the apolipoprotein E receptor of rat liver membrane JOURNAL J Biochem 97 (6), 1803-1806 (1985) PUBMED 2993274...
Gejyo,F., Arakawa,M., Shimizu,N. and Kuwano,R. TITLE Characterization and chromosomal mapping of a novel human gene, ANKHZN JOURNAL Gene 253 (2), 151-160 (2000) PUBMED 10940552 REFERENCE 8 (bases 1 to 7181) AUTHORS Ito,K., Ishii,N., Miyashita,A., Tominaga,K., Kuriyama,H., Maruyama,H., Shirai,M., Naito,M., Arakawa,M. and Kuwano,R. TITLE Molecular cloning of a novel 130-kDa cytoplasmic protein, Ankhzn, containing Ankyrin repeats hooked to a zinc finger motif JOURNAL Biochem Biophys Res Commun 257 (1), 206-213 (1999) PUBMED 10092534...
and Nagai,R. TITLE Kruppel-like zinc-finger transcription factor KLF5/BTEB2 is a target for angiotensin II signaling and an essential regulator of cardiovascular remodeling JOURNAL Nat Med 8 (8), 856-863 (2002) PUBMED 12101409 REFERENCE 7 (bases 1 to 6382) AUTHORS Nagai,N., Nakano,K., Sado,Y., Naito,I., Gunduz,M., Tsujigiwa,H., Nagatsuka,H., Ninomiya,Y. and Siar,C.H. TITLE Localization of type IV collagen a 1 to a 6 chains in basement membrane during mouse molar germ development JOURNAL Int J Dev Biol 45 (7), 827-831 (2001) PUBMED 11732842 REFERENCE 8 (bases 1 to 6382) AUTHORS Bhatt,R.S.,...
AUTHORS Sanders,M.A., Ampasala,D. and Basson,M.D. TITLE DOCK5 and DOCK1 regulate Caco-2 intestinal epithelial cell spreading and migration on collagen IV JOURNAL J Biol Chem 284 (1), 27-35 (2009) PUBMED 19004829 REFERENCE 7 (bases 1 to 6785) AUTHORS Kobashigawa,Y., Sakai,M., Naito,M., Yokochi,M., Kumeta,H., Makino,Y., Ogura,K., Tanaka,S. and Inagaki,F. TITLE Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK JOURNAL Nat Struct Mol Biol 14 (6), 503-510 (2007) PUBMED 17515907 REFERENCE 8 (bases 1 to 6785) AUTHORS Pratt,S.J.,...
new therapeutic targets in hematological cancer? JOURNAL Leukemia 18 (11), 1751-1759 (2004) PUBMED 15457181 REMARK Review article REFERENCE 7 (bases 1 to 15717) AUTHORS Hao,Y., Sekine,K., Kawabata,A., Nakamura,H., Ishioka,T., Ohata,H., Katayama,R., Hashimoto,C., Zhang,X., Noda,T., Tsuruo,T. and Naito,M. TITLE Apollon ubiquitinates SMAC and caspase-9, and has an essential cytoprotection function JOURNAL Nat Cell Biol 6 (9), 849-860 (2004) PUBMED 15300255 REFERENCE 8 (bases 1 to 15717) AUTHORS Bartke,T., Pohl,C., Pyrowolakis,G. and Jentsch,S. TITLE Dual role of BRUCE as an antiapoptotic IAP and...
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0.099 | 0.099 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(full_search:reference:Naito)?source=Rattus norvegicus (Norway rat)?to=0&format=json
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0.150 | 0.005 | cgi_end;
GGRNA ver.2 by
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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