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2021-10-17 15:03:18, GGRNA : RefSeq release 207 (Jul, 2021)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Rattus norvegicus uncharacterized LOC102552958 (LOC102552958), transcript variant X2, ncRNA. (13206 bp)
tcatctctgttattctggggtcacacatcctgaaccccatctctaagaggtggcatttggcagggaaactgcctctgacctgccacccgagacacatttgtttgggtccctagagtacccccaaggggtgacctggtgacccaaagccagacttccctcagacctgcttcagccaggacccttcctctcctctgccctcagttctttccctctggctctactaggctccccactttcttccaggtatgctgtatgtaagctggtcaggaacctgctgtagttgcagaaataacccaatctcttcttgggagtggtggggagaccaaaggggacaatcctaaccagtaagatgaatataatgcaaatccagacaggaaatggccagtgtctagggcaacagaatagcttagcaagcacactttactcattcagtctcctcttccagttaaaacatgttcagagaccagatatccccttgactcccctgagcccagcacctcatctaaggaatgtgaaaagatcccctacacctcttggaggtgtaaagataagatggggtgaaggcttgcgtggtggtactccccccagggtacggggtgt...
position 7155
XR_001840731.2 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus uncharacterized LOC108351031 (LOC108351031), ncRNA. (17134 bp)
cagcaccacagtccccaccctgttttctaatcacccctcatgacagggtgccatgtcctgcttcgcagactttcagtggagttcagagaggaacggagtgtcttgtggacctgtgtttttatttccaggaggatgcaaaggacgagacaggactgttcctcccgcctgccctctctgacttgtttggctgaccccacccaccactcggacaggaaggagcttctctaagtcagggagggatttggtctcaggctggggtcagtttcacagctacggagtgcccagattccttaccaatctcttcttgactctcatagtctcctccggtgcagttgtccctgccttctgggtaaggaacaggagccttggaaagctagtaagtgagacgcccaggctgggtgtccctgagatatggttactgatctgcctggatgcagtgtcaccccttttgctggttcccagtggctgctccagctgctcccagtgggcaattgatagatcctagtaagtcaggttgagtggcagtcagaagggagatggaccagataggaccggccctggcctgcgatgcgaagcaggcagcatgggtctgatgttccc...
position 10675
XR_001838069.2 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)

Data Export:

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Debug Info:

Redirect URI : http://ggrna.dbcls.jp/en/rn/comp%3acaagaagagattg
lang : en | div : | spe : rn | query_string : comp:caagaagagattg | format : html | download :

0.000 | 0.000 | search_start;
0.075 | 0.075 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:caatctcttcttg)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.086 | 0.011 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:caatctcttcttg)?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.086 | 0.000 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]