LOCUS       XM_039098303            2546 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus sperm motility kinase X-like
            (LOC103693496), transcript variant X8, mRNA.
ACCESSION   XM_039098303
VERSION     XM_039098303.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /country="USA: Wisconsin, Milwaukee, Medical College of
                     Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2546
                     /gene="LOC103693496"
                     /note="sperm motility kinase X-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 71 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:103693496"
                     /db_xref="RGD:9090555"
     CDS             1089..1766
                     /gene="LOC103693496"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X5"
                     /protein_id="XP_038954231.1"
                     /db_xref="GeneID:103693496"
                     /db_xref="RGD:9090555"
                     /translation="

MVTVVQMYGMFQDALTYDDVHVNFTQEEWALLDPSQKSLYKDVMQETYRNLTAIGYNWEDHTIEEHCQSFRRHGRHERCHTGEKPSENTQCGKAFAQHSHLQRHKSTHTGEKLYECKPRDKAFTYDSQLQTLERIHTGEKPYKCNQCGKAFERRCTLGRHKLIHTGRKSYKCNQCGKAFARHSHLKTHGITHTGEKPYECDQCGKAFAYHSYLQVHKRIHTGVKP"

     misc_feature    1131..1253
                     /gene="LOC103693496"
                     /note="KRAB box; Region: KRAB; pfam01352"
                     /db_xref="CDD:426216"
     misc_feature    <1314..1751
                     /gene="LOC103693496"
                     /note="FOG: Zn-finger [General function prediction only];
                     Region: COG5048"
                     /db_xref="CDD:227381"
     misc_feature    1353..1496
                     /gene="LOC103693496"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275368"
     misc_feature    1518..1580
                     /gene="LOC103693496"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275368"
     misc_feature    order(1518..1520,1527..1529,1566..1568,1578..1580)
                     /gene="LOC103693496"
                     /note="Zn binding site [ion binding]; other site"
                     /db_xref="CDD:275368"
     misc_feature    order(1533..1535,1539..1541,1545..1547,1551..1556,
                     1563..1568,1575..1577,1617..1619,1623..1625,1635..1640,
                     1647..1652,1659..1661,1701..1703,1707..1709,1713..1715,
                     1719..1724,1731..1736,1743..1745)
                     /gene="LOC103693496"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]; other site"
                     /db_xref="CDD:275368"
     misc_feature    1602..1664
                     /gene="LOC103693496"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275368"
     misc_feature    1686..1748
                     /gene="LOC103693496"
                     /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
                     finger"
                     /db_xref="CDD:275368"
ORIGIN      

gtagccctggctgtcctgaaagtagctgtttagaacgtggggcctcagatgtaaatggtccacctgcctctggctccagagtgccaggattaaatgtgggccaacatgccccgctttctctttgtttgtttgtttgtttgtttgtttgttcatttttatgttattggctgatggttggactatgggttttggcacatgtcaagcatatgctgctgtgttgatcttcatccatgttatgaattttgaaatttgacagagagcatgttctgtttctcaggatggcatgtattcatgacattcatacatatcattcatgacattcatatgcacatcatgtatgcctaatccccatagtagtcagaaaatggcttcagaattacggaacttggagtaatcaatagttgtgaagctcccttctaactactggcaattgaggccaattatttttaagaccagcaagagctcttcactgctgagccagctcctgtcctatgttgcttatttaggatcaacatttacattgccagtattttcagctatctgtttgtatctgtttcaacattcatccccttttagtaagatctcattactgttacagttaaaactgggacacctcaagattatggaagaagaatacagaagtgcagtgaatgtaattctttgtaggaactctagtaaaaacctctgagtcctttctatctttcttgtttgtttgtttgattgatttttcataggggagacagggtcttaatatgtacctctggctgtcctggatagacctcagatatacctgcctctgcctcctgagtgcttgaattaaagacatgagcctatatgctcacttgatatttttttgcagttagtaattgttcatacaatttctctgtgtgctcaatactgcgcccccctccattaattagcatttctcttgcaaggctatatcctacccaaagagcaaagatatgacagaggtgaaccttattactcagttttcttctaagatgatttcgtaattacattagaacatctgggtcaagaaataagtgggttaagcacaagaagcatacatttacagtgatatcggtatcatggttactgttgtacaaatgtatgggatgtttcaggatgcattgacctatgatgatgtacatgtgaacttcactcaagaagaatgggctttgctggatccttcacagaagagtctttacaaagatgtgatgcaggagacctataggaacctcactgctataggttacaattgggaagaccatactattgaagaacattgtcaaagtttcagaagacatggaaggcatgaaagatgtcatactggagagaagccctctgaaaatactcagtgtggtaaagcctttgcacaacatagtcatctccaaagacataagagcacacatactggagagaaactctatgaatgtaagccacgtgataaagcctttacatacgattctcagcttcaaactcttgaaaggattcatactggagaaaaaccctacaaatgtaatcaatgtggtaaagcctttgaacgtcgttgtactcttggaaggcataaactaatacatactggaagaaaatcctacaaatgcaatcagtgtggtaaagcctttgcacgacacagtcatctcaaaacgcatggaataacacatactggagagaaaccttacgaatgtgatcaatgtggtaaagcctttgcatatcatagttatctccaagtacataaaagaatacatactggagtgaaaccttaagaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagcctttgtatgtaatgctagtctccgaaaacataaagcaacacatactagagtgaaaccttatgattgtaagcaatttagtaagttctttgcctctcatgatcaactttgacaacatgaaagaattcatactggagagcaaccttaaaatgtagtcaatgtggtaaagccttttcacaatcaagccacctccaactacataaaagaacacatacgtactaaagagtaaccgtatgaatgtaaccaatgcagtaaagcctttactgtgatcttcaaaggtatggtggtttaaatatacttggcccatggcaagtggcagtgttaggaggtatggcctttttggagtagatgtggcctttgaggatgtatgtcactgtgggggagggtgggctttgagtccccatgcttaaactctacccagggcagaagagtcttctggctgccttctgatcaagatgtagaactctcctccagcaccgtgtctgcttggacactgacattccttccaccttgataatagactgaacctctgaatctgtataccgcccctccccccaattaaatgtcctttctaagagttgccttggtcatggtatcttttcacagcattaaaacccaaattaacacaaacagcataaaagataccacattagagagaaactatgaatgtactaaa

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