2024-05-04 16:06:31, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_176814 2849 bp RNA linear ROD 12-JUL-2022 DEFINITION Rattus norvegicus cut-like homeobox 1, pseudogene 1 (Cux1-ps1), non-coding RNA. ACCESSION NR_176814 XM_039108675 VERSION NR_176814.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JACYVU010000142.1. On Jul 7, 2022 this sequence version replaced XM_039108675.1. ##Evidence-Data-START## Transcript is intronless :: SRR8487227.237441.1 [ECO:0000345] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-2849 JACYVU010000142.1 3503215-3506063 FEATURES Location/Qualifiers source 1..2849 /organism="Rattus norvegicus" /mol_type="transcribed RNA" /strain="BN" /db_xref="taxon:10116" /chromosome="4" /map="4q24" gene 1..2849 /gene="Cux1-ps1" /note="cut-like homeobox 1, pseudogene 1" /pseudo /db_xref="GeneID:681658" /db_xref="RGD:1592878" misc_RNA 1..2849 /gene="Cux1-ps1" /product="cut-like homeobox 1, pseudogene 1" /pseudo /db_xref="GeneID:681658" /db_xref="RGD:1592878" exon 1..2849 /gene="Cux1-ps1" /inference="alignment:Splign:2.1.0" /pseudo ORIGIN
actccatctcaatatgtctcaagatggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctgcagagagaacttgatgccaccgcaacagtattggcaaacaggcaagatgagagcgaacagtccagaaagcggctcattgagcagagccgagaattcaagaagaacactccagaggatttacgcaagcaggtagcaccactgctcaagagcttccaaggggagattgatgcactgagtaaaaggagcaaagaagcagaagcagccttcttgactgtgtacaagagactaattgatgttccagatcccgtaccagccctggacctcgggcaacagctggaaataaaagtgcagcgtctacacgacattgaaacagagaaccagaaacttagggaaacactagaagagtacaacaaggagtttgctgaagtgaaaaaccaagaggttacggtaaaagcacttaaggagaaaatccgagaatacgagcagaccctgaagagtcaggccgagaccatcgctctggagaaggagcagaagctacaaaatgattttgcagagaaggagagaaagctgcaagagacacagatgtccaccacctcaaagctggaggaagctgagcacaaactccagactctgcaaacagccctggaaaaaactcgaacagaattatttgacctgaaaaccaaatacgatgaagaaaccactgcaaaggccgacgagatcgagatgatcatgactgaccttgaacgagccaaccagagggcagaggtggcacagagagaggcagagactttaggggaacagctttcatcggccaaccactctctccaactggcctcgcagatccagaaggctccagatgtggccatagaggtgctgacccgatccagcctggaagtagagttggctgccaaagagcgggagattgcccagctggtggaagatgtgcagcgactccaggccagcctcaccaagctgcgtgagaattccgccagccagatctcacagctggagcagcagctgaacgccaagaatagcacactcaaacaactggaagaaaaactcaaaggccaggctgactatgaagatgtgaagaaagagttgaccactctgaagtccatggagtttgcaccatcggagggagcagggacacaggactcaaccaagcccctggaggttttactcctggagaagaaccgctcgctgcagtccgagaatgccacgctgcgcatctccaacagtgacctgagcgggcgctgtgcggagctgcagatccatctcactgaggccacagccaaggccgttgagcagaaggagctgatcgctcgcttggagcaggacctcagcaccatccagtccatccaacgccctgatgctgagggagcttccgagcaaggcctagagaagattccagagcccatcaaggaggccacagctctgttttatggaccctcagtgtcatccagtgggaccctcccagaaggtcaggtggactccctactttccatcatctccagccaaagggaacgtttccgcacccggaaccaagagctggaggctgagagccgtatggcccagcacaccatccaggccctgcagagcgagctggacagcctgcgtgccgacaacatcaagctttttgagaagatcaagttcttgcagagttaccctggccggggtatcggcagtgacgacacggagctgcggtactcctcccagtacgaggaacgcctggaccctttctcctccttcagcaagagggagcggcagagaaaatacctgggcctgagcccctgggacaaggccacacttggcatggggcatctgattctctccaacaaaatggcccgcaccattggcttcttctacaccttgttcctgcactgtctggtctttctggtactgtacaagctggcatggagtgagagcgtggagagagactgtgctgccacctgcgccaagaagttcgccgatcatctgcacaaattccatgagagtgacaatggagcagcagctggcgacttatggcagtgacccccaggctcaccggagatgtattggctgctaccccgtcccttgcttgatcagctgcttctaatgacatagccttccccttcccccccacaaaaaaatcccccacggatttgtctctgtcctcatccaacagctgccggaagcccagagcctctagaacccctttcaaaggttgtcacaaccccattggagccccaaggttcaaacaacccctagcaaccagctagggtggactccctgagtctctgccctcggtctagtcacctgacctgggctccacccacatcagaacctctagccctggtggcagagctttctgactgtgatacatattgtcagcacccactccggcattcctataggctctcgtaggaccctgccacataataaaataggtgggagtcttctgggccccagcttctcatccgccctcttccccggcagggcgggaggtggctttgatacaaccctaaccacagtctccaagtcagggagccccagagggcgggatggtttccactaccccttccctgcacccagtccatgatttgagttctgcttgcttctttggcaaaatattttggtttctagaagaggaagtctctccaatgaggcccctgtgcctcaggcaccacagacatggtcccagaggccccagcaaaacttgtcctgggccatgatagcaaggccaactctcaggacctcagatcttcctccgctggatttgatctttttcttcagcttcgcatgaaataaagaatcattgcagccacaaaaaaaaaaaaaaaaaaagaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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