2025-09-13 15:49:20, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS NR_132638 465 bp RNA linear ROD 03-JUN-2025 DEFINITION Rattus norvegicus LIM homeobox 1, opposite strand (Lhx1os), long non-coding RNA. ACCESSION NR_132638 VERSION NR_132638.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 465) AUTHORS Bonaldo,M.F., Lennon,G. and Soares,M.B. TITLE Normalization and subtraction: two approaches to facilitate gene discovery JOURNAL Genome Res 6 (9), 791-806 (1996) PUBMED 8889548 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ010000010.1. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BI281801.1, SRR26360194.1074150.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA5760383, SAMEA5760389 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-79 JAXUCZ010000010.1 69901969-69902047 80-213 JAXUCZ010000010.1 69910745-69910878 214-465 JAXUCZ010000010.1 69911887-69912138 FEATURES Location/Qualifiers source 1..465 /organism="Rattus norvegicus" /mol_type="transcribed RNA" /strain="BN" /db_xref="taxon:10116" /chromosome="10" /map="10q26" gene 1..465 /gene="Lhx1os" /note="LIM homeobox 1, opposite strand" /db_xref="GeneID:102553190" /db_xref="RGD:7595653" ncRNA 1..465 /ncRNA_class="lncRNA" /gene="Lhx1os" /product="LIM homeobox 1, opposite strand" /db_xref="GeneID:102553190" /db_xref="RGD:7595653" exon 1..79 /gene="Lhx1os" /inference="alignment:Splign:2.1.0" exon 80..213 /gene="Lhx1os" /inference="alignment:Splign:2.1.0" exon 214..465 /gene="Lhx1os" /inference="alignment:Splign:2.1.0" ORIGIN
gcgtttagaggatcagtggcggcaggcccgcgcggtgccggcgactagcagcgagaagtcccggcttcttccaggtttggagatggcattgggggaccaacctcccgaggttgtgaggatgacaacagtactctgtgatgctgtccctcctcaggttggctgccatccctgctgatggagagagactggagactgtcagagaagattgtgccgatgcagaggcctcccagtgaagtgtgaagggatgggccttaaccagggttgaagaaaaaaagtgaagaagggagaacccaagaaaaggtggggacagttgggacttctgattacattcgtctggtacacttcttttgcactgtatgttatcatctccaaatttcacatttattgtagaaatctgcagtgtgtatgccccggccaaatgctgcttggctaaaaaagtgttaaataaaactgtaagaaatgcta
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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