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2024-04-20 14:32:41, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_053449               4015 bp    mRNA    linear   ROD 08-NOV-2023
DEFINITION  Rattus norvegicus histone deacetylase 4 (Hdac4), mRNA.
ACCESSION   NM_053449 XM_001067733 XM_343629
VERSION     NM_053449.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4015)
  AUTHORS   Zhang D, Du J, Yu M and Suo L.
  TITLE     Urine-derived stem cells-extracellular vesicles ameliorate diabetic
            osteoporosis through HDAC4/HIF-1alpha/VEGFA axis by delivering
            microRNA-26a-5p
  JOURNAL   Cell Biol Toxicol 39 (5), 2243-2257 (2023)
   PUBMED   35554780
  REMARK    GeneRIF: Urine-derived stem cells-extracellular vesicles ameliorate
            diabetic osteoporosis through HDAC4/HIF-1alpha/VEGFA axis by
            delivering microRNA-26a-5p.
REFERENCE   2  (bases 1 to 4015)
  AUTHORS   Yang Y, Wang Z, Xu Y, Liu X, Sun Y and Li W.
  TITLE     Knockdown of lncRNA H19 alleviates ox-LDL-induced HCAECs
            inflammation and injury by mediating miR-20a-5p/HDAC4 axis
  JOURNAL   Inflamm Res 71 (9), 1109-1121 (2022)
   PUBMED   35854140
  REMARK    Erratum:[Inflamm Res. 2023 Apr;72(4):893. PMID: 36806965]
REFERENCE   3  (bases 1 to 4015)
  AUTHORS   Moreno-Ruperez A, Priego T, Gonzalez-Nicolas MA, Lopez-Calderon A,
            Lazaro A and Martin AI.
  TITLE     Role of Glucocorticoid Signaling and HDAC4 Activation in Diaphragm
            and Gastrocnemius Proteolytic Activity in Septic Rats
  JOURNAL   Int J Mol Sci 23 (7), 3641 (2022)
   PUBMED   35408999
  REMARK    GeneRIF: Role of Glucocorticoid Signaling and HDAC4 Activation in
            Diaphragm and Gastrocnemius Proteolytic Activity in Septic Rats.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4015)
  AUTHORS   Festa Ortega JF, Heidor R, Auriemo AP, Marques Affonso J, Pereira
            D' Amico T, Herz C, de Conti A, Ract J, Gioieli LA, Purgatto E,
            Lamy E, P Pogribny I and Salvador Moreno F.
  TITLE     Butyrate-containing structured lipids act on HDAC4, HDAC6, DNA
            damage and telomerase activity during promotion of experimental
            hepatocarcinogenesis
  JOURNAL   Carcinogenesis 42 (8), 1026-1036 (2021)
   PUBMED   33999989
  REMARK    GeneRIF: Butyrate-containing structured lipids act on HDAC4, HDAC6,
            DNA damage and telomerase activity during promotion of experimental
            hepatocarcinogenesis.
            Erratum:[Carcinogenesis. 2021 Oct 26;42(10):1304. PMID: 34605906]
REFERENCE   5  (bases 1 to 4015)
  AUTHORS   Wei W, Chen W and He N.
  TITLE     HDAC4 induces the development of asthma by increasing
            Slug-upregulated CXCL12 expression through KLF5 deacetylation
  JOURNAL   J Transl Med 19 (1), 258 (2021)
   PUBMED   34118928
  REMARK    GeneRIF: HDAC4 induces the development of asthma by increasing
            Slug-upregulated CXCL12 expression through KLF5 deacetylation.
            Publication Status: Online-Only
REFERENCE   6  (bases 1 to 4015)
  AUTHORS   Fischle W, Dequiedt F, Hendzel MJ, Guenther MG, Lazar MA, Voelter W
            and Verdin E.
  TITLE     Enzymatic activity associated with class II HDACs is dependent on a
            multiprotein complex containing HDAC3 and SMRT/N-CoR
  JOURNAL   Mol Cell 9 (1), 45-57 (2002)
   PUBMED   11804585
REFERENCE   7  (bases 1 to 4015)
  AUTHORS   Lu J, McKinsey TA, Zhang CL and Olson EN.
  TITLE     Regulation of skeletal myogenesis by association of the MEF2
            transcription factor with class II histone deacetylases
  JOURNAL   Mol Cell 6 (2), 233-244 (2000)
   PUBMED   10983972
REFERENCE   8  (bases 1 to 4015)
  AUTHORS   Grozinger CM and Schreiber SL.
  TITLE     Regulation of histone deacetylase 4 and 5 and transcriptional
            activity by 14-3-3-dependent cellular localization
  JOURNAL   Proc Natl Acad Sci U S A 97 (14), 7835-7840 (2000)
   PUBMED   10869435
REFERENCE   9  (bases 1 to 4015)
  AUTHORS   Lemercier C, Verdel A, Galloo B, Curtet S, Brocard MP and Khochbin
            S.
  TITLE     mHDA1/HDAC5 histone deacetylase interacts with and represses MEF2A
            transcriptional activity
  JOURNAL   J Biol Chem 275 (20), 15594-15599 (2000)
   PUBMED   10748098
REFERENCE   10 (bases 1 to 4015)
  AUTHORS   Grozinger CM, Hassig CA and Schreiber SL.
  TITLE     Three proteins define a class of human histone deacetylases related
            to yeast Hda1p
  JOURNAL   Proc Natl Acad Sci U S A 96 (9), 4868-4873 (1999)
   PUBMED   10220385
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JACYVU010000215.1.
            
            On or before Sep 1, 2012 this sequence version replaced
            XM_001067733.2, XM_343629.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed/partial sample support SAMD00132261,
                              SAMD00132262 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-78                JACYVU010000215.1  25819778-25819855   c
            79-317              JACYVU010000215.1  25786923-25787161   c
            318-389             JACYVU010000215.1  25698379-25698450   c
            390-631             JACYVU010000215.1  25672874-25673115   c
            632-782             JACYVU010000215.1  25656525-25656675   c
            783-903             JACYVU010000215.1  25646887-25647007   c
            904-1025            JACYVU010000215.1  25640673-25640794   c
            1026-1157           JACYVU010000215.1  25636185-25636316   c
            1158-1270           JACYVU010000215.1  25632544-25632656   c
            1271-1387           JACYVU010000215.1  25629686-25629802   c
            1388-1586           JACYVU010000215.1  25629399-25629597   c
            1587-1810           JACYVU010000215.1  25627090-25627313   c
            1811-2065           JACYVU010000215.1  25621082-25621336   c
            2066-2252           JACYVU010000215.1  25618243-25618429   c
            2253-2386           JACYVU010000215.1  25616483-25616616   c
            2387-2492           JACYVU010000215.1  25613929-25614034   c
            2493-2539           JACYVU010000215.1  25610331-25610377   c
            2540-2647           JACYVU010000215.1  25606936-25607043   c
            2648-2703           JACYVU010000215.1  25604906-25604961   c
            2704-2791           JACYVU010000215.1  25604055-25604142   c
            2792-2911           JACYVU010000215.1  25601707-25601826   c
            2912-3009           JACYVU010000215.1  25600871-25600968   c
            3010-3128           JACYVU010000215.1  25593797-25593915   c
            3129-3262           JACYVU010000215.1  25592259-25592392   c
            3263-3347           JACYVU010000215.1  25578991-25579075   c
            3348-3489           JACYVU010000215.1  25578032-25578173   c
            3490-4015           JACYVU010000215.1  25577284-25577809   c
FEATURES             Location/Qualifiers
     source          1..4015
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q36"
     gene            1..4015
                     /gene="Hdac4"
                     /note="histone deacetylase 4"
                     /db_xref="GeneID:363287"
                     /db_xref="RGD:619979"
     exon            1..78
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            79..317
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     CDS             296..3529
                     /gene="Hdac4"
                     /EC_number="3.5.1.98"
                     /note="HD4"
                     /codon_start=1
                     /product="histone deacetylase 4"
                     /protein_id="NP_445901.1"
                     /db_xref="GeneID:363287"
                     /db_xref="RGD:619979"
                     /translation="
MSSQSHPDGLSGRDQPVELLNPARVNHMPSTVDVATALPLQVAPAAVPMDLRLDHQFSLPLEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLNKKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVATALKKRPLDVTDSACSSAPGSGPSSPNSSSGNVSTENGIAPTVPSTPAETSLAHRLVTREGSVAPLPLYTSPSLPNITLGLPATGPAAGAAGQQDAERLALPALQQRISLFPGTHLTPYLSTSPLERDGGAAHNPLLQHMVLLEQPPTQTPLVTGLGALPLHTQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQHLVIQQQHQQFLEKHKQQFQQQQLHLSKMISKPSEPPRQPESHPEETEEELREHQALLDEPYLDRLPGQKEPSLAGVQVKQEPIESEEEEVEATREAEPSQRPATEQELLFRQQALLLEQQRIHQLRNYQASMEAAGIPVSFGSHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAVHSMEKVMGIHSEYWRCLQRLSPTVGHSLIEAQKCENEEAETVTAMASLSVGVKPAEKRSEEEPMEEEPPL"
     misc_feature    <563..748
                     /gene="Hdac4"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; Region:
                     ClassIIa_HDAC4_Gln-rich-N; cd10162"
                     /db_xref="CDD:197398"
     misc_feature    order(569..571,581..583,614..619,626..628,647..649,
                     659..664)
                     /gene="Hdac4"
                     /note="dimer interface A, B [polypeptide binding]; other
                     site"
                     /db_xref="CDD:197398"
     misc_feature    644..1231
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Interaction with MEF2A. /evidence=ECO:0000250"
     misc_feature    689..796
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    905..970
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    920..922
                     /gene="Hdac4"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q6NZM9; propagated from
                     UniProtKB/Swiss-Prot (Q99P99.2); phosphorylation site"
     misc_feature    1010..1276
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    1028..1030
                     /gene="Hdac4"
                     /note="Phosphoserine, by CaMK4 and SIK1.
                     /evidence=ECO:0000250|UniProtKB:P56524; propagated from
                     UniProtKB/Swiss-Prot (Q99P99.2); phosphorylation site"
     misc_feature    1337..1354
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: PxLPxI/L motif, mediates interaction with ANKRA2
                     and 14-3-3 proteins.
                     /evidence=ECO:0000250|UniProtKB:P56524"
     misc_feature    1340..1342
                     /gene="Hdac4"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:P56524; propagated from
                     UniProtKB/Swiss-Prot (Q99P99.2); phosphorylation site"
     misc_feature    1691..1693
                     /gene="Hdac4"
                     /note="Phosphoserine, by CaMK4 and SIK1.
                     /evidence=ECO:0000250|UniProtKB:P56524; propagated from
                     UniProtKB/Swiss-Prot (Q99P99.2); phosphorylation site"
     misc_feature    1817..1885
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    1919..2041
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    1982..1984
                     /gene="Hdac4"
                     /note="Phosphoserine.
                     /evidence=ECO:0007744|PubMed:22673903; propagated from
                     UniProtKB/Swiss-Prot (Q99P99.2); phosphorylation site"
     misc_feature    2162..2233
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    2183..2185
                     /gene="Hdac4"
                     /note="Phosphoserine.
                     /evidence=ECO:0007744|PubMed:22673903; propagated from
                     UniProtKB/Swiss-Prot (Q99P99.2); phosphorylation site"
     misc_feature    2186..2188
                     /gene="Hdac4"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:P56524; propagated from
                     UniProtKB/Swiss-Prot (Q99P99.2); phosphorylation site"
     misc_feature    2234..3445
                     /gene="Hdac4"
                     /note="Histone deacetylase 4; Region: HDAC4; cd10006"
                     /db_xref="CDD:212530"
     misc_feature    2252..3526
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Histone deacetylase. /evidence=ECO:0000250"
     misc_feature    order(2678..2683,2705..2710,2792..2794,2798..2800,
                     3074..3076,3194..3196)
                     /gene="Hdac4"
                     /note="active site"
                     /db_xref="CDD:212530"
     misc_feature    3425..3526
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Nuclear export signal. /evidence=ECO:0000250"
     misc_feature    3449..3526
                     /gene="Hdac4"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99P99.2);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     exon            318..389
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            390..631
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            632..782
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            783..903
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            904..1025
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            1026..1157
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            1158..1270
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            1271..1387
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            1388..1586
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            1587..1810
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            1811..2065
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            2066..2252
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            2253..2386
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            2387..2492
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            2493..2539
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            2540..2647
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            2648..2703
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            2704..2791
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            2792..2911
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            2912..3009
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            3010..3128
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            3129..3262
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            3263..3347
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            3348..3489
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
     exon            3490..4015
                     /gene="Hdac4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
ggagcgcctgacgggcgtagggcgcggcctatccccgcgcggctctgcgctcgagggggagcagcatcatggttcaacgttcatctctgcaaggccaggtgacaacttctgctcttcttgtggattacttggtttacaagacgctgccagtgggacttcgagtttgcgcagctgggacccgggcctcctcagttttgtacctgcatgttctcgtgggaatttggagcgtgttggagccactgtttacctggacatcttgagccatttcgaacttaaggcactgacgctgctagcaatgagctcccaaagccatccagatggactttctggccgagaccagcctgtggagctgctgaatcctgcccgcgtgaaccacatgcccagcacggtggacgtggctacagcgctgcctctgcaggtggcccctgcagcagtacccatggacctgcgcttggaccaccagttctcactgcccttggaacctgcactgcgggagcagcaactgcagcaggaactcctagcactgaagcagaagcagcagatccagcggcagatcctcattgcagagttccagcgtcagcatgagcagttgtcccgacagcatgaggcacagctgcatgaacatatcaagcagcagcaggagatgctggccatgaagcaccagcaggagctgctggagcaccagcggaaactggagcggcaccggcaagagcaggagctggagaagcagcaccgtgagcagaagctgcagcagctcaagaacaaggagaagggcaaagagagtgctgtggcgagcacagaggtgaagatgaagctgcaggagtttgttctcaacaagaagaaggctctggcccaccggaacctgaaccactgcatgtccagcgacccccgctactggtatgggaagacacagcacagctcccttgaccagagctctccaccccagagtggggtgtcagcctcctacaaccaccctgtcttgggaatgtacgacgccaaagatgacttccctcttaggaaaacagcttctgaacctaacctgaaattacggtcaaggcttaagcagaaagtagctgagagacggagcagccccctgctgcgcaggaaagatggccctgtggccactgctctaaaaaagcgacccctggatgttacagactccgcatgtagcagcgcccctggctccggtcccagctcccccaatagcagctctggcaacgtcagcaccgagaatggcattgcacccaccgtgcccagcactccagctgagacgagcttggcacacagacttgtgactcgagaaggctctgttgccccacttcctctctatacatcaccatccttgcccaacatcaccctgggacttcctgccactggccctgctgctggtgcagcaggccagcaggatgctgagaggcttgctctcccagccctccagcagcgaatctccttgttccctgggacccacctcaccccatacctgagcacctcgcccctggagcgggacggtggagcagctcacaaccccctcctgcagcacatggtcctgctggagcagccacccacccagacgccccttgtcacaggcctgggggcactgcccctccacacacagtccctggttggtgcggacagggtgtccccatccattcacaagctgcggcagcaccgacctctggggcgcacgcagtcagcacccctgccgcagaacgcacaggccctgcagcacctggtgatccagcagcagcaccagcagtttctggagaagcacaagcaacagttccagcagcagcagctgcacctcagcaagatgatttctaaacccagtgagccacctcggcagcctgagagccacccggaggagacagaggaggagctccgtgaacaccaggccttgctggatgagccctacctagatcggctccctgggcagaaggagccctccttagctggtgtgcaggtgaagcaggagcccatcgagagtgaggaggaagaagtagaggccactcgagaggcggaacccagccagcgcccagccactgaacaggagcttctctttagacagcaagctcttctgctggagcagcagaggatccaccagttaaggaactaccaggcatctatggaggctgctggcatccctgtgtcatttggcagccacagacctctgtctcgcgcacagtcctccccagcatctgccaccttccccatgtcagtccaggagccccccaccaaaccaaggttcaccacaggccttgtgtatgacacactcatgttgaagcaccagtgcacctgtgggaacaccaacagccacccggagcatgctgggaggatccagagcatctggtcccgcctgcaggagactggcctccgtggcaagtgtgagtgcatccgcggacgcaaggccacactggaagagctgcagacagtgcactcggaggcccacacactcctctatggcacaaaccctctcaacagacagaaactggacagctcgctgacctccgtgtttgtcaggcttccttgtggtggtgttggggtggatagtgataccatatggaatgaggtgcactcgtctggggcagcccgcctggctgtaggctgtgtagtggagctggtcttcaaggtggccacgggagagctaaagaatggctttgctgtggttcgtcccccaggacaccatgccgaggagagtacacccatgggtttctgctactttaattctgtggcaattgcagccaaacttctccagcagaggttgaatgtgagcaagatcctcattgtagactgggatgtgcaccatgggaatgggacccagcaggccttctacaatgaccccaatgttctctacatgtccctgcaccgctatgacgatgggaacttcttcccaggaagtggagcaccagatgaggtgggcacagggccaggcgtgggtttcaatgtcaacatggccttcacgggtggcctcgatccccccatgggagacgccgagtacctggcagccttcagaacggtggtcatgccaatcgcaaatgagtttgccccagatgtggtactggtgtcctcgggcttcgatgctgtggagggccaccccacacctcttggagggtacaatctctctgccaaatgtttcgggtacttgacaaaacagctgatgggcttagctggtggccggatcgtgctggccctggagggaggccatgacctgacagccatctgtgatgcttctgaagcatgtgtttctgctctgctgggaaatgagcttgagcctctgccagaaaaggttctacatcagagacccaatgccaatgccgtccactccatggagaaagtgatgggcatccacagtgagtactggcgctgcctgcagcgtttgtcccccactgtggggcactctctgattgaggcgcagaagtgtgagaatgaagaagctgagacagtcaccgccatggcctcgctgtctgtaggcgtcaaacctgctgagaagagatctgaggaggagcccatggaggaggagccaccactgtagccgaagctgctgttctctcctttgtctgtctgtcttaaggctcagccaagaaactttcccgtgtcactcctgcgtcctgccttggtgctctctctgagtgcgaagggacagcaggtgtgaagcagcaacgggaggcctttctgccgccctggaccacaggtctggagacgcacacgaacaccaggtgtggcagatcagatggaacacaggacagtgcgcaacacgtgggcacacagacatgccgcagaagccaagcacacgctgctggggtcccccaggaaagccacgaaggaagaagcttgtggcaacttgggcagagttgctgaattgagttgacatgaggaaaatgaaaatcaaagatctaataatacagaacaaacttgattaaaactggtgcttaacatttgattcttacccacaatcccacagtctccgtgtaaaccactcaactcatcttgtagcttttttaaaaaaaaaaaaaaacaa
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]