2024-04-23 23:23:06, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_031032 1424 bp mRNA linear ROD 11-JUN-2023 DEFINITION Rattus norvegicus glia maturation factor, beta (Gmfb), mRNA. ACCESSION NM_031032 VERSION NM_031032.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 1424) AUTHORS Shi S, Gu H, Xu J, Sun W, Liu C, Zhu T, Wang J, Gao F, Zhang J, Ou Q, Jin C, Xu J, Chen H, Li J, Xu G, Tian H and Lu L. TITLE Glia maturation factor beta deficiency protects against diabetic osteoporosis by suppressing osteoclast hyperactivity JOURNAL Exp Mol Med 55 (5), 898-909 (2023) PUBMED 37121966 REMARK GeneRIF: Glia maturation factor beta deficiency protects against diabetic osteoporosis by suppressing osteoclast hyperactivity. REFERENCE 2 (bases 1 to 1424) AUTHORS Xu FF, Zhang ZB, Wang YY and Wang TH. TITLE Brain-Derived Glia Maturation Factor beta Participates in Lung Injury Induced by Acute Cerebral Ischemia by Increasing ROS in Endothelial Cells JOURNAL Neurosci Bull 34 (6), 1077-1090 (2018) PUBMED 30191459 REMARK GeneRIF: This study demonstrated that GMFB is up-regulated in astrocytes after Acute Cerebral Ischemia. REFERENCE 3 (bases 1 to 1424) AUTHORS Lim R, Zaheer A, Khosravi H, Freeman JH Jr, Halverson HE, Wemmie JA and Yang B. TITLE Impaired motor performance and learning in glia maturation factor-knockout mice JOURNAL Brain Res 1024 (1-2), 225-232 (2004) PUBMED 15451385 REFERENCE 4 (bases 1 to 1424) AUTHORS Zaheer A, Fink BD and Lim R. TITLE Expression of glia maturation factor beta mRNA and protein in rat organs and cells JOURNAL J Neurochem 60 (3), 914-920 (1993) PUBMED 8436977 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081778.1. On Oct 17, 2004 this sequence version replaced NM_031032.1. ##Evidence-Data-START## Transcript exon combination :: BC081778.1, FQ222145.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN12840105, SAMN12840107 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..1424 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="15" /map="15p14" gene 1..1424 /gene="Gmfb" /note="glia maturation factor, beta" /db_xref="GeneID:81661" /db_xref="RGD:70910" exon 1..86 /gene="Gmfb" /inference="alignment:Splign:2.1.0" CDS 84..512 /gene="Gmfb" /note="GMF-beta; DNA for thyroid hormone receptor binding site (276bp)" /codon_start=1 /product="glia maturation factor beta" /protein_id="NP_112294.1" /db_xref="GeneID:81661" /db_xref="RGD:70910" /translation="
MSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDKRLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPLGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH"
misc_feature 87..89 /gene="Gmfb" /note="N-acetylserine. /evidence=ECO:0000269|Ref.4; propagated from UniProtKB/Swiss-Prot (Q63228.2); acetylation site" misc_feature 108..473 /gene="Gmfb" /note="ADF-homology domain of glia maturation factor beta and related proteins; Region: ADF_GMF-beta_like; cd11283" /db_xref="CDD:200439" exon 87..183 /gene="Gmfb" /inference="alignment:Splign:2.1.0" exon 184..233 /gene="Gmfb" /inference="alignment:Splign:2.1.0" exon 234..283 /gene="Gmfb" /inference="alignment:Splign:2.1.0" exon 284..366 /gene="Gmfb" /inference="alignment:Splign:2.1.0" exon 367..440 /gene="Gmfb" /inference="alignment:Splign:2.1.0" exon 441..1398 /gene="Gmfb" /inference="alignment:Splign:2.1.0" ORIGIN
caggaagggaggtggctgcagagccattcttaaaggggcccaagagatcatacggcaacggacggctgacgaccggaaggaaaatgagtgagtctttggtggtttgtgatgttgctgaagatttagtggaaaagctgagaaagtttcgttttcgaaaagaaacccacaatgctgctattataatgaagattgacaaggataaacgcttggtggtgctggatgaggagctcgagggtgtctctccagatgaacttaaagatgaactacctgaacggcaacctcgcttcattgtgtatagttataaataccagcacgacgatggccgggtctcctaccctctgtgctttatcttctccagtcctctggggtgcaaacctgagcagcagatgatgtacgctgggagtaagaacaagctggtccagaccgccgagctaactaaggtatttgaaataagaaacaccgaagacctaactgaagaatggttacgtgagaaacttggatttttccactaatgtgaacttctgtgtttctaaagtatttatgtattaacctgaccatactggaaccagacataaatagttatttatgcctaaaaatgcactgttacttacagtttgtttcctgcagtaaagaaaaattcatttgtgcagtttgaacaaaggggaaatcatcttcatagtaatgaaactttgtgaagtgtttccttgtatctgtcattgttaggtggactacttttctccagggatggttcgcacccttgtgactaatttctataatttatgattcagaatttgttactgttgcagacactataggaaagtgggtatagactgtgatagacaacagttcctccttggccactcctggtactggcatggcagtttgtaagtgccaagagcatttcatcacctatcgcatcattgaggttcactggggctgaagtgtaagtgaccgctctgagccgtgagtggcgatgtagtggaccctctgctgctctcgtcacattcctcctctcttgcattcctgtatcctttcaatcaagtgtagagtcgccatcaatcactcctccttaaggaccgggggcttagttttatggtagagttaggattattagaggttttcttctgatggaacatagtcctagtcttagagactcgtgggctgtataatcaagggcttccgtctaggttatgtcaccagtaggcagctagagcggagcttggtaacagaaagcacctcctaacgtctcgtgagcactgttctggatatgttaacctgtgcctttgatttgtcagctttaacattagcttcagactcctacactgccagtattctagatttggtgagattaatacttttttaaagggttcaaataaaacaattttctaatatgtgtaaaaaaaaaaaaaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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