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Previous release (v1)
2024-11-01 12:31:58, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS NM_001191692 5007 bp mRNA linear ROD 24-JUN-2024
DEFINITION Rattus norvegicus capping protein regulator and myosin 1 linker 1
(Carmil1), mRNA.
ACCESSION NM_001191692 XM_225336
VERSION NM_001191692.1
KEYWORDS RefSeq.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 5007)
AUTHORS Lanier,M.H., McConnell,P. and Cooper,J.A.
TITLE Cell Migration and Invadopodia Formation Require a Membrane-binding
Domain of CARMIL2
JOURNAL J Biol Chem 291 (3), 1076-1091 (2016)
PUBMED 26578515
REFERENCE 2 (bases 1 to 5007)
AUTHORS Sakiyama,M., Matsuo,H., Shimizu,S., Chiba,T., Nakayama,A.,
Takada,Y., Nakamura,T., Takada,T., Morita,E., Naito,M., Wakai,K.,
Inoue,H., Tatsukawa,S., Sato,J., Shimono,K., Makino,T., Satoh,T.,
Suzuki,H., Kanai,Y., Hamajima,N., Sakurai,Y., Ichida,K., Shimizu,T.
and Shinomiya,N.
TITLE Common variant of leucine-rich repeat-containing 16A (LRRC16A) gene
is associated with gout susceptibility
JOURNAL Hum Cell 27 (1), 1-4 (2014)
PUBMED 24318514
REFERENCE 3 (bases 1 to 5007)
AUTHORS Liang,Y., Niederstrasser,H., Edwards,M., Jackson,C.E. and
Cooper,J.A.
TITLE Distinct roles for CARMIL isoforms in cell migration
JOURNAL Mol Biol Cell 20 (24), 5290-5305 (2009)
PUBMED 19846667
REFERENCE 4 (bases 1 to 5007)
AUTHORS Kolz,M., Johnson,T., Sanna,S., Teumer,A., Vitart,V., Perola,M.,
Mangino,M., Albrecht,E., Wallace,C., Farrall,M., Johansson,A.,
Nyholt,D.R., Aulchenko,Y., Beckmann,J.S., Bergmann,S., Bochud,M.,
Brown,M., Campbell,H., Connell,J., Dominiczak,A., Homuth,G.,
Lamina,C., McCarthy,M.I., Meitinger,T., Mooser,V., Munroe,P.,
Nauck,M., Peden,J., Prokisch,H., Salo,P., Salomaa,V., Samani,N.J.,
Schlessinger,D., Uda,M., Volker,U., Waeber,G., Waterworth,D.,
Wang-Sattler,R., Wright,A.F., Adamski,J., Whitfield,J.B.,
Gyllensten,U., Wilson,J.F., Rudan,I., Pramstaller,P., Watkins,H.,
Doering,A., Wichmann,H.E., Spector,T.D., Peltonen,L., Volzke,H.,
Nagaraja,R., Vollenweider,P., Caulfield,M., Illig,T. and Gieger,C.
CONSRTM EUROSPAN Consortium; ENGAGE Consortium; PROCARDIS Consortium; KORA
Study; WTCCC
TITLE Meta-analysis of 28,141 individuals identifies common variants
within five new loci that influence uric acid concentrations
JOURNAL PLoS Genet 5 (6), e1000504 (2009)
PUBMED 19503597
REFERENCE 5 (bases 1 to 5007)
AUTHORS Gonzalez-Begne,M., Lu,B., Han,X., Hagen,F.K., Hand,A.R.,
Melvin,J.E. and Yates,J.R.
TITLE Proteomic analysis of human parotid gland exosomes by
multidimensional protein identification technology (MudPIT)
JOURNAL J Proteome Res 8 (3), 1304-1314 (2009)
PUBMED 19199708
REFERENCE 6 (bases 1 to 5007)
AUTHORS Yang,C., Pring,M., Wear,M.A., Huang,M., Cooper,J.A., Svitkina,T.M.
and Zigmond,S.H.
TITLE Mammalian CARMIL inhibits actin filament capping by capping protein
JOURNAL Dev Cell 9 (2), 209-221 (2005)
PUBMED 16054028
COMMENT INFERRED REFSEQ: This record is predicted by genome sequence
analysis and is not yet supported by experimental evidence. The
reference sequence was derived from JAXUCZ010000017.1.
On Jul 17, 2010 this sequence version replaced XM_225336.5.
Sequence Note: The RefSeq transcript and protein were derived from
genomic sequence to make the sequence consistent with the reference
genome assembly. The genomic coordinates used for the transcript
record were based on alignments.
##Evidence-Data-START##
RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760386
[ECO:0006172]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-40 JAXUCZ010000017.1 41236464-41236503
41-138 JAXUCZ010000017.1 41240515-41240612
139-189 JAXUCZ010000017.1 41348989-41349039
190-249 JAXUCZ010000017.1 41353556-41353615
250-371 JAXUCZ010000017.1 41368355-41368476
372-469 JAXUCZ010000017.1 41380016-41380113
470-540 JAXUCZ010000017.1 41380452-41380522
541-614 JAXUCZ010000017.1 41380714-41380787
615-690 JAXUCZ010000017.1 41394939-41395014
691-779 JAXUCZ010000017.1 41399452-41399540
780-874 JAXUCZ010000017.1 41401294-41401388
875-961 JAXUCZ010000017.1 41414673-41414759
962-1065 JAXUCZ010000017.1 41420001-41420104
1066-1143 JAXUCZ010000017.1 41423704-41423781
1144-1220 JAXUCZ010000017.1 41423915-41423991
1221-1325 JAXUCZ010000017.1 41427033-41427137
1326-1395 JAXUCZ010000017.1 41428546-41428615
1396-1407 JAXUCZ010000017.1 41432477-41432488
1408-1489 JAXUCZ010000017.1 41434282-41434363
1490-1589 JAXUCZ010000017.1 41434888-41434987
1590-1644 JAXUCZ010000017.1 41435088-41435142
1645-1817 JAXUCZ010000017.1 41439395-41439567
1818-1886 JAXUCZ010000017.1 41441385-41441453
1887-1980 JAXUCZ010000017.1 41444717-41444810
1981-2079 JAXUCZ010000017.1 41451261-41451359
2080-2208 JAXUCZ010000017.1 41457749-41457877
2209-2340 JAXUCZ010000017.1 41460107-41460238
2341-2516 JAXUCZ010000017.1 41465052-41465227
2517-2604 JAXUCZ010000017.1 41467984-41468071
2605-2754 JAXUCZ010000017.1 41470686-41470835
2755-2821 JAXUCZ010000017.1 41489718-41489784
2822-3018 JAXUCZ010000017.1 41490418-41490614
3019-3131 JAXUCZ010000017.1 41492768-41492880
3132-3555 JAXUCZ010000017.1 41498345-41498768
3556-3637 JAXUCZ010000017.1 41502396-41502477
3638-3850 JAXUCZ010000017.1 41503786-41503998
3851-3991 JAXUCZ010000017.1 41506152-41506292
3992-5007 JAXUCZ010000017.1 41515189-41516204
FEATURES Location/Qualifiers
source 1..5007
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="17"
/map="17p11"
gene 1..5007
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="capping protein regulator and myosin 1 linker 1"
/db_xref="GeneID:306941"
/db_xref="RGD:1306623"
CDS 1..4125
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine rich repeat containing 16; leucine-rich
repeat-containing protein 16A; leucine rich repeat
containing 16A"
/codon_start=1
/product="F-actin-uncapping protein LRRC16A"
/protein_id="NP_001178621.1"
/db_xref="GeneID:306941"
/db_xref="RGD:1306623"
/translation="
MTDESSDVPRELMESIKDVIGRKIKISVKKKVKLEVKGDRVENKVLVLTSCRAFLLSARIPTKLELTFSYLEIHGVICHKPTQMVVETEKCNVSMKMASLEDASDVLAHIGTCLRRIFPGLSPLRIMKKVSMEPSERLASLQALWDSQTLAEPGPCGGFSQMYACVCDWLGFSYREEVQWDVDTIYLTQDTRELNLQDFSHLEHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILRVVSRSNLLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNVLRGDDLSHMYNFLAQPNTIVHLDLSNTECSLEMVCSALLRGCLQCLAVLNLSRSVFSHRKGKEVPPSFKQFFSSSLALIQINLSGTKLSPEPLKALLLGLACNHSLKGVSLDLSNCELGHCLRSGGAQVLEGCIAEIHNITSLDISDNGLESDLSTLIVWLSRNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQDEDSPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNSMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTSPEKTEEALQKIENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRACGGDAIQEDLKAAERLMRDAKNSKTLLPNLYHVGGASWAGASGLSSSPIQEILESMAGEVTRVVDEQLKGLLESMVDAAENLCPNVMRKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLTVASFLSDRIVDEILDSLSNSHRKLANHFSRLSKSLPQREDLEVELVEEKPVKRAILTVEDLTEVEKLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPFPSVRQEKRSSGLISELPSEEGRRLEHFTKLRPKRNKKQQPTQAAVCSINIIPHDGEQNGLMGRVDEGVDEFFTKKVTKMDCKRSSTRCSDTHDLVEGDEKKKRDSRRSGFLNLIKSRSRSERPPTVLMTEELSSPKGAVRSPPVDTARKEIKAAEHNGAPERTEEMRTPEPLEEGLAEEAGRAERSDSRGSPQGGRRYVQVMGSGLLAEMKAKQERRAACAQKKLGNDVISQDPSSPVMSNTERLDGGATVPKLQPGLPEARFGLGTPEKNAKAEPRVDGGCRSRNSSSMPTSPKPLLQSPKPSPAARPSIPQKPRTASKPEDTPDSPSGPSSPKVALLPPILKKVSLDKERDDQSSSQSSPRTFSQEVSRRSWGPAQEYQEQKQRNLGKDGHQGSKSSDSGEEAEKEFIFV"
misc_feature 112..357
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="Carmil pleckstrin homology domain; Region: Carm_PH;
pfam17888"
/db_xref="CDD:436119"
misc_feature 742..825
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275378"
misc_feature <778..1986
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="Ran GTPase-activating protein (RanGAP) involved in
mRNA processing and transport [Translation, ribosomal
structure and biogenesis]; Region: RNA1; COG5238"
/db_xref="CDD:444072"
misc_feature 832..918
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 919..993
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1015..1098
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1099..1179
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1180..1275
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1276..1359
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1360..1461
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1513..1623
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1648..1728
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1729..1812
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 2368..3243
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="CARMIL C-terminus; Region: CARMIL_C; pfam16000"
/db_xref="CDD:464966"
misc_feature 3394..>3849
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/note="ORF080 virion core protein; Provisional; Region:
PHA02682"
/db_xref="CDD:177464"
exon 1..40
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 41..138
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 139..189
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 190..249
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 250..371
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 372..469
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 470..540
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 541..614
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 615..690
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 691..779
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 780..874
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 875..961
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 962..1065
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1066..1143
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1144..1220
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1221..1325
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1326..1395
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1396..1407
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1408..1489
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1490..1589
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1590..1644
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1645..1817
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1818..1886
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1887..1980
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 1981..2079
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 2080..2208
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 2209..2340
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 2341..2516
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 2517..2604
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 2605..2754
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 2755..2821
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 2822..3018
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 3019..3131
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 3132..3555
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 3556..3637
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 3638..3850
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 3851..3991
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
exon 3992..5007
/gene="Carmil1"
/gene_synonym="Lrrc16; Lrrc16a"
/inference="alignment:Splign:2.1.0"
ORIGIN
atgaccgacgagagctccgatgtcccccgggagttaatggaaagcatcaaggatgttattggcagaaagatcaaaatctcggtgaagaagaaagtgaagttggaagtgaagggtgacagagtggagaacaaagtgctggtgctcacatcatgccgagctttcctcctgtcagcacgcatccccaccaagctcgagttaaccttcagctatctagagattcatggagtcatctgccacaaacctactcagatggttgtggaaactgagaagtgtaacgtgtccatgaagatggcgtcactggaggatgcgagtgatgtgctggctcacataggcacctgcttacggaggatatttccgggcctttccccactgagaatcatgaagaaagtctccatggagccatctgagcgcctggccagtctccaggccctgtgggacagccagaccttggctgagccaggcccctgtggtgggttttctcagatgtatgcctgtgtatgcgactggctgggattttcgtacagggaagaagtgcagtgggatgtggatacaatttatctgacacaagataccagggaattaaatttacaagacttcagtcatctcgagcacagagacctgattcccatcatcgctgccctggaatataaccaatggttcaccaaactgtcctccaaggatctcaagctgtccacggatgtctgtgaacagatcttgagggtggtgagtaggtccaatctactggaagagttggtgttggaaaatgctggactcagaacagattttgcacagaaattggccagtgctctagcacacaatcctaactcaggacttcacacaatcaaccttgctgggaacccgctggaggatcgaggcgtgtcctccttaagtattcaatttgccaaactcccaaagggattgaagcatttgaacctgtctaaaacctcattgtcacctaaaggggtgaatagcctttgtcagtccctcagtgccaaccctctgactgcctctaccctcacccacctggacctctcagggaatgtcctccgaggagatgacctctcacacatgtacaattttttggcccagcccaacaccattgttcatctggatctgtctaatactgaatgttctctggagatggtgtgtagtgctctcctccggggatgccttcagtgtctggccgtgctcaatctctccaggtctgtcttctctcacaggaaaggaaaggaagtccctccgtctttcaagcagtttttcagcagttctctggctttgatccaaatcaatctttcaggcacaaaactgtctcccgagcccttgaaggcattgctcctgggcctggcctgcaatcatagtttgaagggagtctctctggatctcagcaattgtgagcttggccactgtctgaggtccggaggagctcaagtgttagaaggctgtatcgctgaaatccacaacatcaccagcttagatatctctgacaacggtttagaatctgacctatctaccctgattgtgtggctcagtagaaacagatcaatacagcacctggcgttaggcaaaaattttaacaatatgaaatccaaaaatctgacgcctgtgttggacaacttagtgcagatgatccaagatgaagactctcctctgcagtccttgtccctggctgactcaaaactcaagactgaagtcaccatcatcatcaatgccttgggcagcaacacctccctgaccaaagtggacatcagtgggaatagcatgggggacatgggagcgaagatgctggctaaggctctacagatcaacaccaaactcaggacagtcatctgggacaaaaacaacattactgcacaaggcttccaagacatagccgttgctatggaaaagaactacacactgagatttatgccaattccaatgtatgatgcttctcaagctcttaaaacaagccctgagaagacagaagaggctctgcagaagatagaaaattatctgctccggaatcacgagaccaggaaataccttcaggagcaggcctaccgcctccagcaaggcattgtcaccagcaccacccagcagatgattgaccggatatgtgtgaaggttcaggatcacctcaactccttacgagcctgtgggggggatgctattcaggaggatttaaaggcagcagagcggctcatgcgagatgctaagaattctaaaacgttgttaccaaatttataccatgtgggcggagcatcatgggcaggagccagtgggctgtcatccagtcccattcaggagatcctggagtcaatggccggagaagtcacaagagttgtggatgaacaactgaagggtttgctagaatctatggtggatgcggccgagaacctctgccccaatgtcatgagaaaagcccacatccgacaagacctgatccacgccagcaccgaaaagatttccattccacgaacctttgttaaaaatgtcctgttggaacagtctggaattgacattcttaacaaaattagtgaggtgaagctgacagtggcctcgttcttgtctgaccgaatcgtagatgagatcctggattctctctccaacagccatcggaagctggccaaccatttcagcaggctaagcaagagccttccccagcgagaggacctagaggtggagctggtggaggaaaagccggtgaaacgggccatacttacggttgaggatctcactgaggtggagaagctggaagacctagacacttgtatgatgactcctaagtccaagaggaagagcatccacagccgaatgctgcggcctgtctccagggcctttgaaatggagtttgatcttgataaagccctggaagaggtgccgattcacatcgaagacccgcctttcccatcagtccggcaggagaagcgaagctcgggcttgatctctgagctgccctcagaggaaggcaggagactggaacacttcaccaagttaaggcccaagaggaacaagaagcagcaacctacacaagcagcggtctgtagcatcaacatcatcccccatgatggagaacagaatggcctcatgggcagagtggatgaaggtgtagatgaatttttcaccaagaaggtgactaaaatggattgcaagaggtcatccacgcgctgttcagatacccacgacctcgtagaaggagatgagaagaaaaaacgggattctcggagaagtggctttctcaacctaattaaatccaggtccagatctgagcggccgcccacggtcctgatgacagaagagctctcctccccgaaaggggcagtccggagcccaccagtggataccgccaggaaggagataaaggcagctgagcacaatggtgctccagaacgcacagaggagatgaggacaccggagcccctggaggagggtctagcagaggaagctggcagggctgagcgcagtgacagcaggggcagcccacagggtggccggcgctatgtgcaggtgatgggcagcgggctgctggcggagatgaaggctaaacaggagcggagagcagcatgtgcgcagaagaagcttggcaacgatgtcatctcccaggatccctccagcccagtcatgagcaacacagagcgattagatggaggggcaacagtgcctaaactgcaaccaggtcttccagaggcccgctttggtttgggaacaccagaaaagaatgccaaagctgaacccagggtggatggaggctgcaggtcccgaaactcctccagcatgcccaccagcccgaagcccctccttcagtcccctaagcccagccctgcagcccggccgtctatccctcagaagccaagaactgcctccaaacctgaagataccccagactctccatctggtcctagttcccctaaagttgcccttcttccacccatcctcaaaaaagtctccttggacaaagagcgtgatgaccagagcagctcacagtccagtcctaggaccttctcccaggaagtctcaaggagaagctggggcccagcccaggagtatcaagaacaaaagcaacggaacttgggcaaagatggtcaccaggggagcaaatccagtgactctggagaagaggcagaaaaagagtttatttttgtgtaatataatggtgcccaccccaagccttcccatgcaaggtgctctctgcagccctcagatgcagggttctctctgcggccctcagagctgggagcagtgcctcttgtctcttctcttggtgctttcttctttttctccttttcttctttttcttatacctctatattaaaacaaatttttggtcttctccccttcttggcatttgatttctaaacattgtttcttatgccttcaacaaaaagccagcaattattccatgggccctacttgaatttctctaaggcagctacacattgccctgcacggtgagttgtttttggaaattaatgaagtaactggactcacacccaagtaactatccaggagatcctggagtgctacagggtgtgtttgtgtcagacccacacatgactcaatatagcaatttattcttgatgtatgcaattgcacattgtaattatattaacagcacactaataaataatttgtataaattatatatatattagatcttgggcactgttcttaacattcttttgtgggacatttccttccccatgtagaattgtacatttaaagcttgtttggtaatatttgcagaccatcagcaagcacagctaagaacagagtgtgtgaagcccagattcatgtatatagttgattggaatgaggtcttatgaatattcatgtttttgaaggcctttaatttctgtctgcttattagtttttaatgtgtggtttttaaaagaaaatgttggcacctgtaaaaaaaaatctaaatactactctttataaatcatctcacaaatattcacttacattacaagctgaaagtattttattcatatgtatatttataccaataaaatgattttacaagtggaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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