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Previous release (v1)
2026-10-05 19:48:29, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS NM_001107018 7181 bp mRNA linear ROD 31-MAR-2024
DEFINITION Rattus norvegicus ankyrin repeat and FYVE domain containing 1
(Ankfy1), mRNA.
ACCESSION NM_001107018 XM_001080190 XM_239269
VERSION NM_001107018.2
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 7181)
AUTHORS Nehru,V., Voytyuk,O., Lennartsson,J. and Aspenstrom,P.
TITLE RhoD binds the Rab5 effector Rabankyrin-5 and has a role in
trafficking of the platelet-derived growth factor receptor
JOURNAL Traffic 14 (12), 1242-1254 (2013)
PUBMED 24102721
REFERENCE 2 (bases 1 to 7181)
AUTHORS Zhang,J., Reiling,C., Reinecke,J.B., Prislan,I., Marky,L.A.,
Sorgen,P.L., Naslavsky,N. and Caplan,S.
TITLE Rabankyrin-5 interacts with EHD1 and Vps26 to regulate endocytic
trafficking and retromer function
JOURNAL Traffic 13 (5), 745-757 (2012)
PUBMED 22284051
REFERENCE 3 (bases 1 to 7181)
AUTHORS Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
TITLE Large-scale proteomics and phosphoproteomics of urinary exosomes
JOURNAL J Am Soc Nephrol 20 (2), 363-379 (2009)
PUBMED 19056867
REFERENCE 4 (bases 1 to 7181)
AUTHORS Kang,D., Oh,S., Ahn,S.M., Lee,B.H. and Moon,M.H.
TITLE Proteomic analysis of exosomes from human neural stem cells by flow
field-flow fractionation and nanoflow liquid chromatography-tandem
mass spectrometry
JOURNAL J Proteome Res 7 (8), 3475-3480 (2008)
PUBMED 18570454
REFERENCE 5 (bases 1 to 7181)
AUTHORS Schroder,B., Wrocklage,C., Pan,C., Jager,R., Kosters,B.,
Schafer,H., Elsasser,H.P., Mann,M. and Hasilik,A.
TITLE Integral and associated lysosomal membrane proteins
JOURNAL Traffic 8 (12), 1676-1686 (2007)
PUBMED 17897319
REFERENCE 6 (bases 1 to 7181)
AUTHORS Schnatwinkel,C., Christoforidis,S., Lindsay,M.R.,
Uttenweiler-Joseph,S., Wilm,M., Parton,R.G. and Zerial,M.
TITLE The Rab5 effector Rabankyrin-5 regulates and coordinates different
endocytic mechanisms
JOURNAL PLoS Biol 2 (9), E261 (2004)
PUBMED 15328530
REFERENCE 7 (bases 1 to 7181)
AUTHORS Kuriyama,H., Asakawa,S., Minoshima,S., Maruyama,H., Ishii,N.,
Ito,K., Gejyo,F., Arakawa,M., Shimizu,N. and Kuwano,R.
TITLE Characterization and chromosomal mapping of a novel human gene,
ANKHZN
JOURNAL Gene 253 (2), 151-160 (2000)
PUBMED 10940552
REFERENCE 8 (bases 1 to 7181)
AUTHORS Ito,K., Ishii,N., Miyashita,A., Tominaga,K., Kuriyama,H.,
Maruyama,H., Shirai,M., Naito,M., Arakawa,M. and Kuwano,R.
TITLE Molecular cloning of a novel 130-kDa cytoplasmic protein, Ankhzn,
containing Ankyrin repeats hooked to a zinc finger motif
JOURNAL Biochem Biophys Res Commun 257 (1), 206-213 (1999)
PUBMED 10092534
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JAXUCZ010000010.1.
On Sep 15, 2012 this sequence version replaced NM_001107018.1.
Sequence Note: The RefSeq transcript and protein were derived from
genomic sequence to make the sequence consistent with the reference
genome assembly. The genomic coordinates used for the transcript
record were based on alignments.
##Evidence-Data-START##
Transcript exon combination :: SRR26643299.43656.1,
SRR26643295.39188.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA5760383, SAMEA5760386
[ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on conservation, expression,
longest protein
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-33 JAXUCZ010000010.1 57810781-57810813
34-226 JAXUCZ010000010.1 57830201-57830393
227-345 JAXUCZ010000010.1 57832425-57832543
346-481 JAXUCZ010000010.1 57838137-57838272
482-605 JAXUCZ010000010.1 57845140-57845263
606-755 JAXUCZ010000010.1 57847590-57847739
756-921 JAXUCZ010000010.1 57849445-57849610
922-1126 JAXUCZ010000010.1 57855074-57855278
1127-1195 JAXUCZ010000010.1 57856814-57856882
1196-1395 JAXUCZ010000010.1 57857241-57857440
1396-1493 JAXUCZ010000010.1 57860935-57861032
1494-1722 JAXUCZ010000010.1 57863141-57863369
1723-1821 JAXUCZ010000010.1 57863915-57864013
1822-1975 JAXUCZ010000010.1 57864238-57864391
1976-2144 JAXUCZ010000010.1 57865882-57866050
2145-2263 JAXUCZ010000010.1 57867402-57867520
2264-2420 JAXUCZ010000010.1 57868111-57868267
2421-2621 JAXUCZ010000010.1 57869317-57869517
2622-2798 JAXUCZ010000010.1 57870903-57871079
2799-2946 JAXUCZ010000010.1 57871999-57872146
2947-3037 JAXUCZ010000010.1 57873219-57873309
3038-3162 JAXUCZ010000010.1 57873555-57873679
3163-3309 JAXUCZ010000010.1 57874805-57874951
3310-3400 JAXUCZ010000010.1 57878197-57878287
3401-7181 JAXUCZ010000010.1 57878715-57882495
FEATURES Location/Qualifiers
source 1..7181
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="10"
/map="10q24"
gene 1..7181
/gene="Ankfy1"
/note="ankyrin repeat and FYVE domain containing 1"
/db_xref="GeneID:303292"
/db_xref="RGD:1309598"
exon 1..33
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
CDS 24..3533
/gene="Ankfy1"
/note="ankyrin repeat and FYVE domain-containing protein
1"
/codon_start=1
/product="rabankyrin-5"
/protein_id="NP_001100488.2"
/db_xref="GeneID:303292"
/db_xref="RGD:1309598"
/translation="
MAEEEVAKLEKHLMLLRQEYVKLQKKLAETEKRCTLLAAQANKENSSESFISRLLAIVAGLYEQEQYSDLKIKVGGRHISAHKFVLAARSDSWSLANLSSTAELDLSDANPEVTMTMLRWIYTDELEFREDDVFLTELMKLANRFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNASTLMNYCAEIIASHWDDLRKEDFSSLSAQLLYKMIKSKTEYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNETDHNGDLALDLALSRRLESIATTLVSYKADVDMVDKNGWSLLHKGIQRGDLFASTFLIKNGALVNAATVGAQETPLHLVALYSSKKYSADVMSEMAQIAEALLQAGANPNMQDSKGRTPLHLSIMARNEYVFNQLLQCKQLDLELKDHEGSTALWLAVQYITVSSDQSVNPFEDLPVVNGTSFDENSFAARLIQRGSNTDAPDTMTGNCLLQRAAGAGNEAAALFLATSGAHANHRNKWGETPLHTACRHGLANLTAELLQQGANPNLQTEEALPVPKESPVLMGSADGIYLQTPLHMAIAYNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGASINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADINVRTQDRETALQLAIKNQLPLVVDAICTRGADMSVPDEKGNPPLWLALASNLEDIASTLVRHGCDATCWGPGPSGCLQTLLHRAIDENNESTACFLIRSGCDVNSPRQPGTDGEGEEEARDGQTPLHLAASWGLEETVQCLLEFGANVNAQDAEGRTAVHVAISNQHSVIIQLLISHPSIELSIRDRQGLTPFACAMTYKNNKAAEAILKRESGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVNSRVQDATKLTPLHLAVQAGSEIIVRNLLLAGAKVNELTKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHLAVMHGRLNNIRALLTECTVDAEAFNLRGQSPLHILGQYGKENAAAIFDLFLECMPEYPLDKPDAEGNTVLLLAYMKGNANLCRAIVRSGVRLGVNNNQGVNIFNYQVATKQLLFRLLDMLSKEPPWCDGSNCYECTAKFGVTTRKHHCRHCGRLLCHKCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS"
misc_feature 171..530
/gene="Ankfy1"
/note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
(poxvirus and zinc finger) domain found in rabankyrin-5
(Rank-5); Region: BTB_POZ_Rank-5; cd18303"
/db_xref="CDD:349612"
misc_feature 507..773
/gene="Ankfy1"
/note="BACK (BTB and C-terminal Kelch) domain found in
rabankyrin-5 (Rank-5); Region: BACK_ANKFY1_Rank5; cd18501"
/db_xref="CDD:350576"
misc_feature 633..1598
/gene="Ankfy1"
/note="Ankyrin repeat [Signal transduction mechanisms];
Region: ANKYR; COG0666"
/db_xref="CDD:440430"
misc_feature 684..782
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 786..881
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature order(885..887,891..893,903..908,915..923,927..932,
942..944,951..953,978..980,984..986,993..995,1005..1010,
1017..1025,1029..1034,1077..1079,1086..1088,1113..1115,
1119..1121,1125..1127,1137..1142,1149..1157,1161..1166,
1176..1178,1185..1187,1215..1217)
/gene="Ankfy1"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:293786"
misc_feature 885..980
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 984..1115
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 1119..1217
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 1323..2135
/gene="Ankfy1"
/note="Ankyrin repeat [Signal transduction mechanisms];
Region: ANKYR; COG0666"
/db_xref="CDD:440430"
misc_feature 1494..1586
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature order(1497..1499,1509..1514,1521..1529,1533..1538,
1548..1550,1557..1559,1584..1586,1647..1649,1653..1655,
1665..1670,1677..1685,1689..1694,1704..1706,1713..1715,
1779..1781,1785..1787,1791..1793,1803..1808,1815..1823,
1827..1832,1842..1844,1851..1853)
/gene="Ankfy1"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:293786"
misc_feature 1647..1781
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 1785..1871
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 1833..2744
/gene="Ankfy1"
/note="Ankyrin repeat [Signal transduction mechanisms];
Region: ANKYR; COG0666"
/db_xref="CDD:440430"
misc_feature 1884..1979
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 1983..2078
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 2085..2183
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature order(2199..2201,2211..2216,2223..2231,2235..2240,
2250..2252,2259..2261,2322..2324,2328..2330,2334..2336,
2346..2351,2358..2366,2370..2375,2385..2387,2394..2396,
2421..2423,2427..2429,2433..2435,2445..2450,2457..2465,
2469..2474,2484..2486,2493..2495)
/gene="Ankfy1"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:293786"
misc_feature 2199..2324
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 2328..2423
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 2388..3254
/gene="Ankfy1"
/note="Ankyrin repeat [Signal transduction mechanisms];
Region: ANKYR; COG0666"
/db_xref="CDD:440430"
misc_feature 2646..2732
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature order(2649..2654,2661..2669,2673..2678,2688..2690,
2697..2699,2730..2732,2736..2738,2742..2744,2754..2759,
2766..2774,2778..2783,2793..2795,2802..2804,2829..2831,
2835..2837,2841..2843,2853..2858,2865..2873,2877..2882,
2892..2894,2901..2903,2928..2930)
/gene="Ankfy1"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:293786"
misc_feature 2736..2831
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 2835..2930
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 3150..3227
/gene="Ankfy1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 3324..3512
/gene="Ankfy1"
/note="FYVE domain found in ankyrin repeat and FYVE
domain-containing protein 1 (ANFY1) and similar proteins;
Region: FYVE_ANFY1; cd15728"
/db_xref="CDD:277267"
misc_feature order(3333..3335,3339..3341,3387..3404,3408..3413,
3483..3491)
/gene="Ankfy1"
/note="putative phosphatidylinositol 3-phosphate binding
site [chemical binding]; other site"
/db_xref="CDD:277267"
exon 34..226
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 227..345
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 346..481
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 482..605
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 606..755
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 756..921
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 922..1126
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 1127..1195
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 1196..1395
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 1396..1493
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 1494..1722
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 1723..1821
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 1822..1975
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 1976..2144
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 2145..2263
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 2264..2420
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 2421..2621
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 2622..2798
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 2799..2946
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 2947..3037
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 3038..3162
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 3163..3309
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 3310..3400
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
exon 3401..7181
/gene="Ankfy1"
/inference="alignment:Splign:2.1.0"
ORIGIN
ctgtaggcagggccgggcccgacatggcggaagaggaggtggccaagttggagaagcatttgatgcttctaagacaagagtatgtcaagctgcagaagaaactggcagaaacggagaagagatgcacacttttggctgcacaagcaaacaaggagaatagcagtgagtcattcatcagccgcttgctggccatagtggcgggtctgtatgagcaggagcagtacagtgatttgaagatcaaggttgggggcaggcacatcagtgctcacaagtttgtcttggccgcccgcagtgatagctggagtctggccaacttgtcttccacagcggagttagacttgtcagatgcgaatcctgaggtgacaatgacaatgcttcgctggatctatacggatgagttagagttcagagaggatgatgtattcctgactgaattgatgaaactggccaatcgctttcagctccagctccttagggagagatgtgagaagggtgttatgtctctggtgaatgttaggaactgtattcgcttctatcaaactgcagaggaattaaatgccagcacactgatgaactattgtgcagaaattattgcaagtcactgggatgacttgcgaaaggaggacttcagtagcctgagtgctcagttgttatacaaaatgattaaatctaaaaccgagtacccattacataaagctatcaaagtggagagagaggatgtggtcttcctctatctgattgaaatggattcccagctacctgggaagcttaacgaaacagatcataatggagatcttgcattagatctggctctgtcacgacgactagagagtattgccaccactctggtcagttataaagctgatgtggatatggtagacaagaatggctggagcttattacataaagggattcaaagaggagatctttttgcttctacattcctcattaagaacggggcccttgtcaatgctgccacagtaggggcgcaagagacccctttacaccttgtagcattgtacagttcaaagaaatactcagcagatgtgatgtctgagatggcgcagattgcggaggccctcctgcaggctggtgccaaccccaacatgcaggatagcaagggcaggactcctttacacttgtccatcatggccaggaacgaatatgtgttcaatcagctgctgcagtgtaaacaattagatttagagctgaaagatcacgagggcagcactgcactctggcttgccgtccagtacatcactgtgtcttcagaccagtctgtaaacccctttgaagacctccctgtggtaaacgggacatcatttgatgagaatagctttgcagctagactcattcaacgcggcagcaacaccgatgctcctgacacaatgacaggaaattgtttactacagagggcagctggggctggaaatgaggctgcagctctcttcctggcaactagtggtgcccacgccaaccacaggaacaaatggggagaaactcctttgcatacagcttgtcggcacggcctggccaacctcacagcagagctactgcagcaaggtgccaacccaaacttgcagacagaagaggctctgcctgtgcccaaggagtctccagtcctaatgggttctgcagatggcatctacctacagacaccactgcacatggcaattgcctataaccatccagatgtggtttctgtcatcttggagcagaaagccaatgctcttcacgccaccaacaacctacaaattattccggatttcagcctcaaggattccagagaccaaactgtgctcggcctcgcgctatggactggcatgcacacaattgctgcccagctgctgggctctggagcttctatcaatgacaccatgtcagatggacagacattgctgcacatggccatacagcggcaggacagcaagagtgctctcttcctgctggagcaccaagctgatataaacgtcaggactcaggatagggagactgcccttcagctggccatcaaaaatcaacttccattggtggttgatgccatatgtactcgaggagctgatatgtctgtgccagatgaaaaagggaacccaccactgtggcttgccttggcaagtaatctggaggacattgcttccactctggtcagacacggttgtgatgctacatgctggggcccaggacccagtgggtgtcttcagacacttctgcatagagccattgatgaaaacaatgagtctactgcctgctttcttattcgcagtggctgtgacgtgaacagtcccagacaaccaggtactgatggagaaggagaagaggaagccagggatgggcagactcctctgcacttggcagcctcatgggggctagaagagacagtgcagtgtcttttggagtttggcgccaatgtcaatgcacaggatgcagaaggaagaacagctgtccacgtggccatcagcaaccagcatagtgtcatcattcagctgttgatctctcaccccagcattgagctgagcatacgggacagacaagggctgactccttttgcctgcgccatgacttacaagaacaataaggcagctgaagccattctaaaacgagagtctggtgctgctgagcaggtagataataaaggtcggaattttcttcacgtggcagttcagaactctgacattgaaagtgtcttgttcctgatcagtgtccaggccaatgtgaactccagagtccaggatgctaccaagttgacccctctgcaccttgctgttcaggcaggctcagagatcattgtccggaatctgcttcttgcaggagccaaggtgaatgaattaaccaagcatcgtcagactgctctccatctcgctgcacagcaggacctgcccaccatctgctcagtcctcctagagaatggagtggactttgctgctgtggatgagaatggaaataatgctcttcatcttgcggtcatgcatggtcgactcaacaatatccgggctcttctgacagagtgtacagtggatgctgaagcctttaatctgagaggccagtcaccactacacattctgggacagtatggcaaagaaaatgcagcagccatctttgatctcttcttagagtgtatgcctgagtatcctctggataagccagatgcagaaggcaacacagttctgctcttagcatacatgaaagggaatgccaacttgtgccgtgccattgttcggtctggggttcgccttggggtgaataataaccaaggagtcaacattttcaactaccaggttgccactaagcagcttctgtttagattgttggatatgctctccaaggagccgccatggtgtgacggctccaactgctatgagtgtactgccaaatttggagtgacaactcggaaacatcactgtcgtcactgcggccgtcttctttgccataaatgctcgaccaaggagattcctattataaagtttgacctgaacaagcctgtgcgggtttgcaacatttgctttgatgtactgactctgggtggagtctcttagtgatgccccaggaggatccaggcctgcatcctctggcacctccccagcagctgctctactcaccagcttgcctcctacccagagcaagagctggcagttgtcttcctgcggcagaagaccatggtgtgatccctgatcgtttgaaaccattctgtatgattgtcagtgtgtcagactgtggtctattgcactagatatctcactggtgggaccaggccagtttagcctatgtgacaaatgtgataggaatcagctagcagcacacaaggacacttggagacaatgttcccttctggtaatgtagcgtccatctcagagaattcaccaagtcttcctgcctgggctttcttagaggcagagcctgacagagtagagagcagctgccagatgagagctggttactctagggtggcggccaccctagtggttatggcctttaatgcacagtgttttcataaagatataggaacctcctgccctcaagtctttaatttctttaagctaagctgtatttttagtgagctgcccttttaaaaaggtgaaatctttctaaacagggttcaaagatgagagctgaaaaattgtggccttaacaactgaaagctttaccagtgttgctgctgctgggtgtcagacacctgtggtagcttacacctagcagctgtctcattctctcgtcttgctgcgtcctgtctgtggagtcctcagtcgctgccacttgagtggtggaagaaatgcactttgactgtgctgcactttttctagagctgtaccattggtgaatccagttcaaaaatccatgttcaaaaatgccatcatgtactcttctatcagtggttctgatggccagctcagactggacctcagcacacactaatcttaaagggaaaactgccaagaaggaagaaattcatactcatgagaaaggagatgggtgtgactttcgtccaggtcctctctccctgatatacccttcccgctcaagccttgccttgcatgctgagtgctagtgctgccagttctgggtagcgccatgcctcctcagagccaagcaagccagggtcctggccagctgtcaacagcctgctttagaaatggggctgaaatgacgagcaaggctccgaagcacaggcctttggtttctgctgctgcccatacttgccctgcgatgctgggcctctctaaagtgtggccagtattttgggttgtttctgttttagaattttaattttttttttattatattgcacactgaaagagaaacttataccactgtttttcttttgtttgtttttatgaaacaaaaccacaattgctctgaaactcagagatgaacaatgtctgatcatagtcagagattaactgtcagtcactcgcactggtgtttgagacatttggtgacccgacattacctgcattaatggagtatggatggatgcatgaaaggggcttcttttgacgtcactttctctcttggagagtggtggctctctattatagagttagacattttactgcctaattatgtataaaatgtgctgataaaccagtgtgctactttctaaaaatacttctgtgatttatatgtatgctttttatgttaacattagctcgtatgcagtatttaaaaggaagggttacttggaggagtgccattgtccactagccggtgactcacttcatatagaatgtttctggagacatttagtcagtcttggccaacaaactataggaagcatgtagtcagtttccaattgttatcacctaaaaaggaccacagagacctagagttaagttgatatcatgagtctttaatgggaaaggtaataacggttcggttttgaaccagggtagtcagtgcacatacacctgttcttccttgcttattctggaaagggggaactaggaaatcaggatgaagctgattattctgtccttgccctaccacaccagtttcagtaacagtcttgcctgtaactgtacttagaatctgaagatcatgcctaaaacatatgtaggttcaagcttttgttccttcagaggtcagtgtagtgattagctgtggctgagagggactgtgtgacttggacattggtagccatgctgtagatgtggctcaggctttcttcacagccccaatccctcaatcatgccctgcctactgcgctgcactcctgctgtacactgccctggccaggaccagacttctccatgtgtgtctctcctgtgctctctccatgctgaccagacttcaccatgaaatttgcttaactgttcttgttcagtcttaatcagtaccttacaaactagcagcaaaacttcatttattcattcaaaaagttgtcagttgtaaatgagccaatcaggaagaatcgattttcctgaaccacaattgctgcatcagttgacactgctgcgctcacctagctttctacctgcctcatgttcctcgctgctctgctgtgcagtgtgtcattgtttttctgtttggtctttaaagaccaaggtacagatcgtgtgcttaactagtttgctatgatcctctaacacagcaatgttccacaagctcaagtgcctacactgaggactcccttgtttccagttgtcttttcattggtgtctcactcggtgatatgttagaacacgagttttgggcctattccaccccaataaccaattcagtccagactgaatattagactgctcagttcacctgccatattctctccaaggagtggggtccacatgatgtttttgtcctctacctcagagccatgagttgtttctgactacccatcagcttttccctctccttgaatgggtctttcatgaaactgggtatatgggtcttaccaccctgcccagtttgtacccatcctccatacggaactgatcctgcactagtcttgtttgcaggcaaggggtggaggacagacagatctccatctagggtttccttacctggagaaaaagaacagtggctgaactgccaaatgcttagacaagagaggaagcaacaacagcatgtaaatgtaaatctccttcacagatactggcttccttcaggatcagccccctagagccacctgaagctccagagctcccctgccagcccagcagaggaagccgctcagcaaaggcctctgagctatgctcactctacagaactaatctagtgaaaaactgagtatgtgaccagttaactaaatataaaatccccagatgttgtagatgccttaaagactttctctggaggatcattgcctcttctgtggaataaataacatattaactattacaactgacagcattggttttctacagtgagggaatctgggactgctggacttactgacttgccaatttggcagctgtgtagaactggatgttccatgacatccttatggtaccaaggacagcagcagcagctgggccaaaactgcaggcacatgtttggatagatcactttggctctcagactgctctggtggtgctcagtgtgggaatggcagcagcagctgggaccatggcgcttagcagcattgtttctttggagtctgtgtaatggaatgtatttttcaaatattgatattttgattttctgtaataattccttataataaaatgaggtaaaattgtgaatttaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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