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Previous release (v1)
2024-04-24 14:18:34, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001009693 3586 bp mRNA linear ROD 23-MAR-2023
DEFINITION Rattus norvegicus thyroid hormone receptor associated protein 3
(Thrap3), mRNA.
ACCESSION NM_001009693 XM_233523
VERSION NM_001009693.1
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 3586)
AUTHORS Horiuchi K, Kawamura T, Iwanari H, Ohashi R, Naito M, Kodama T and
Hamakubo T.
TITLE Identification of Wilms' tumor 1-associating protein complex and
its role in alternative splicing and the cell cycle
JOURNAL J Biol Chem 288 (46), 33292-33302 (2013)
PUBMED 24100041
REFERENCE 2 (bases 1 to 3586)
AUTHORS Lande-Diner L, Boyault C, Kim JY and Weitz CJ.
TITLE A positive feedback loop links circadian clock factor CLOCK-BMAL1
to the basic transcriptional machinery
JOURNAL Proc Natl Acad Sci U S A 110 (40), 16021-16026 (2013)
PUBMED 24043798
REFERENCE 3 (bases 1 to 3586)
AUTHORS Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
Bonneau R, Selbach M, Dieterich C and Landthaler M.
TITLE The mRNA-bound proteome and its global occupancy profile on
protein-coding transcripts
JOURNAL Mol Cell 46 (5), 674-690 (2012)
PUBMED 22681889
REFERENCE 4 (bases 1 to 3586)
AUTHORS Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
Hentze MW.
TITLE Insights into RNA biology from an atlas of mammalian mRNA-binding
proteins
JOURNAL Cell 149 (6), 1393-1406 (2012)
PUBMED 22658674
REFERENCE 5 (bases 1 to 3586)
AUTHORS Heyd F and Lynch KW.
TITLE Phosphorylation-dependent regulation of PSF by GSK3 controls CD45
alternative splicing
JOURNAL Mol Cell 40 (1), 126-137 (2010)
PUBMED 20932480
REFERENCE 6 (bases 1 to 3586)
AUTHORS Ito M, Okano HJ, Darnell RB and Roeder RG.
TITLE The TRAP100 component of the TRAP/Mediator complex is essential in
broad transcriptional events and development
JOURNAL EMBO J 21 (13), 3464-3475 (2002)
PUBMED 12093747
REFERENCE 7 (bases 1 to 3586)
AUTHORS Ge K, Guermah M, Yuan CX, Ito M, Wallberg AE, Spiegelman BM and
Roeder RG.
TITLE Transcription coactivator TRAP220 is required for PPAR gamma
2-stimulated adipogenesis
JOURNAL Nature 417 (6888), 563-567 (2002)
PUBMED 12037571
REFERENCE 8 (bases 1 to 3586)
AUTHORS Kang YK, Guermah M, Yuan CX and Roeder RG.
TITLE The TRAP/Mediator coactivator complex interacts directly with
estrogen receptors alpha and beta through the TRAP220 subunit and
directly enhances estrogen receptor function in vitro
JOURNAL Proc Natl Acad Sci U S A 99 (5), 2642-2647 (2002)
PUBMED 11867769
REFERENCE 9 (bases 1 to 3586)
AUTHORS Naar AM, Beaurang PA, Zhou S, Abraham S, Solomon W and Tjian R.
TITLE Composite co-activator ARC mediates chromatin-directed
transcriptional activation
JOURNAL Nature 398 (6730), 828-832 (1999)
PUBMED 10235267
REFERENCE 10 (bases 1 to 3586)
AUTHORS Ito M, Yuan CX, Malik S, Gu W, Fondell JD, Yamamura S, Fu ZY, Zhang
X, Qin J and Roeder RG.
TITLE Identity between TRAP and SMCC complexes indicates novel pathways
for the function of nuclear receptors and diverse mammalian
activators
JOURNAL Mol Cell 3 (3), 361-370 (1999)
PUBMED 10198638
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BC088415.1.
On Jan 13, 2005 this sequence version replaced XM_233523.2.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC088415.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support
SAMD00132261, SAMD00132262
[ECO:0000350]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on conservation, expression,
longest protein
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..3586
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/chromosome="5"
/map="5q36"
gene 1..3586
/gene="Thrap3"
/note="thyroid hormone receptor associated protein 3"
/db_xref="GeneID:313591"
/db_xref="RGD:1306129"
exon 1..54
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
exon 55..141
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
misc_feature 138..140
/gene="Thrap3"
/note="upstream in-frame stop codon"
exon 142..295
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
CDS 159..3014
/gene="Thrap3"
/note="trap150; thyroid hormone receptor-associated
protein complex 150 kDa component"
/codon_start=1
/product="thyroid hormone receptor-associated protein 3"
/protein_id="NP_001009693.1"
/db_xref="GeneID:313591"
/db_xref="RGD:1306129"
/translation="
MSKTNKSKSGSRSSRSRSASRSRSRSFSKSRSRSRSVSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSTKEKKSSSKDSRPSQAAGDNQGDEAKEQTFSGGTSQDIKGSESSKPWPDATTYGTGSASRASVSDLSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSNASQMGSSMSGGAGYQSGAHQGPFDHGSGSLSPSKKSPVGKSPPATGSAYGSSQKEESAASGGAAYTKRYLEEQKTENGKDKEQKQTNTDKEKLKEKGGFSDADVKMKSDPFAPKTDTEKPFRGSQSPKRYKLRDDFEKKMADFHKEEMDEQDKDKCKGRKEPEFDDEPKFISKVIAGASKNQEEEKSGKWESLHAGKEKQRKAEELEEEPFTERSRKEERGGSKRSESGHRGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESRDKLGNKGDFSSGKSSFSITREAQVNVRMDSFDEDLARPSGLLAQERKLCRDLVHSNKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYLKRGNEQEAAKTKKSPEIHRRIDISPSTFRKHGLTHEELKSPREPGYKAEGKYKDDPVDLRLDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSTEKTEKTHKGSKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYPEEAEDREESTTGFDKSRLGTKDFVGPNERGGRARGTFQFRARGRGWGRGNYSGNNNNNSNNDFQKRSREEEWDPEYTPKSKKYYLHDDREGEGSDKWMSRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDSLQPSAE"
misc_feature 159..440
/gene="Thrap3"
/note="propagated from UniProtKB/Swiss-Prot (Q5M7V8.1);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 162..728
/gene="Thrap3"
/note="propagated from UniProtKB/Swiss-Prot (Q5M7V8.1);
Region: Required for mRNA splicing activation.
/evidence=ECO:0000250"
misc_feature 162..164
/gene="Thrap3"
/note="N-acetylserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 207..209
/gene="Thrap3"
/note="Dimethylated arginine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); methylation site"
misc_feature 354..356
/gene="Thrap3"
/note="Asymmetric dimethylarginine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); methylation site"
misc_feature 459..461
/gene="Thrap3"
/note="Asymmetric dimethylarginine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); methylation site"
misc_feature 480..482
/gene="Thrap3"
/note="Asymmetric dimethylarginine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); methylation site"
misc_feature 507..1832
/gene="Thrap3"
/note="propagated from UniProtKB/Swiss-Prot (Q5M7V8.1);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 816..818
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 819..821
/gene="Thrap3"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 855..857
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 870..872
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 876..878
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 885..887
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 900..2456
/gene="Thrap3"
/note="THRAP3/BCLAF1 family; Region: THRAP3_BCLAF1;
pfam15440"
/db_xref="CDD:434719"
misc_feature 900..902
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:16641100,
ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 912..914
/gene="Thrap3"
/note="N6-methyllysine, alternate.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); methylation site"
misc_feature 915..917
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:16641100,
ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 927..929
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1101..1103
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1116..1118
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1128..1130
/gene="Thrap3"
/note="Phosphothreonine.
/evidence=ECO:0000250|UniProtKB:Q569Z6; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1134..1136
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1140..1142
/gene="Thrap3"
/note="Phosphotyrosine.
/evidence=ECO:0000250|UniProtKB:Q569Z6; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1173..1175
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1194..1196
/gene="Thrap3"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0000250|UniProtKB:Q569Z6; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 1233..3011
/gene="Thrap3"
/note="propagated from UniProtKB/Swiss-Prot (Q5M7V8.1);
Region: Required for mRNA decay activity.
/evidence=ECO:0000250"
misc_feature 1293..1295
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1338..1340
/gene="Thrap3"
/note="Phosphothreonine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1365..1367
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1371..1373
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1512..1514
/gene="Thrap3"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 1554..1556
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1560..1562
/gene="Thrap3"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0000250|UniProtKB:Q569Z6; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 1584..1586
/gene="Thrap3"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0000250|UniProtKB:Q569Z6; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 1704..1706
/gene="Thrap3"
/note="N6-acetyllysine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 1728..1730
/gene="Thrap3"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0000250|UniProtKB:Q569Z6; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 1752..1754
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1821..1823
/gene="Thrap3"
/note="N6-acetyllysine, alternate.
/evidence=ECO:0000250|UniProtKB:Q569Z6; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 1827..1829
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1833..1835
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 1872..1874
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2004..2006
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2013..2015
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2133..3011
/gene="Thrap3"
/note="propagated from UniProtKB/Swiss-Prot (Q5M7V8.1);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 2163..2165
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2193..2195
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2199..2201
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2241..2243
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2580..2582
/gene="Thrap3"
/note="N6-acetyllysine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); acetylation site"
misc_feature 2679..2681
/gene="Thrap3"
/note="Asymmetric dimethylarginine.
/evidence=ECO:0000250|UniProtKB:Q569Z6; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); methylation site"
misc_feature <2727..>2927
/gene="Thrap3"
/note="CASC3/Barentsz eIF4AIII binding; Region: Btz;
cl09653"
/db_xref="CDD:447763"
misc_feature 2736..2738
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2766..2768
/gene="Thrap3"
/note="Phosphothreonine.
/evidence=ECO:0000250|UniProtKB:Q9Y2W1; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2928..2930
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
misc_feature 2961..2963
/gene="Thrap3"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q5M7V8.1); phosphorylation site"
exon 296..1198
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
exon 1199..1894
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
exon 1895..2067
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
exon 2068..2179
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
exon 2180..2264
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
exon 2265..2452
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
exon 2453..2648
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
exon 2649..2792
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
exon 2793..3562
/gene="Thrap3"
/inference="alignment:Splign:2.1.0"
ORIGIN
cgggccggttgtgccgttgcgagactgcagctgtagtcgcttcggccggtcaagagttataccctgactgtaaattggagaagccagtagtgctgctggtgtttttttggagacagttgaagttgaatcattaattctaaggtttaaactcttccaagatgtcaaaaacaaacaaatccaagtctgggtctcgctcttctcggtcaagatcagcatccagatctcggtctcgttcgttttcaaagtctcgatcccgaagccgatctgtctctcgttcaaggaagcgcaggctgagttctaggtctcgttccagatcatactctccagctcataacagagaaaggaatcaccccagagtatatcagaatcgagatttccgaggtcacaacagaggctacagaaggccctattacttccgtggacgaaaccgaggcttttatccatggggccagtataaccgaggtggctatggaaattaccgttctaattggcagaactaccggcaagcatacagccctcgtcggggccgatcccgatctcggtcccccaagagaaggtccccttcaccaaggtccaggagccattctaggaactcggataagtcatcctctgacaggtcaagacgttcttcgtcctcccggtcgtcctccaaccacagcagagttgaatcatctaaacgaaagtctacaaaagagaaaaagtcctcttccaaggatagccggccatctcaggcagctggtgataaccagggagatgaggctaaggagcagacattttctggaggcacctctcaagatataaaagggtctgagagctcaaagccatggccagatgctaccacctatggcactggttctgcatcacgggcctcggtttctgatctgagtccccgggagagaagcccagctctcaaaagccccctccagtctgtggtggttaggcgaaggtcaccacgccctagccctgtgcccaaacctagtcctcctctttctaatgcatcccagatgggctcatctatgtcaggcggtgctggatatcagtctggagcacaccaaggtccgtttgaccatggctctgggtctttgagtccatccaaaaagagccctgtgggtaagagtccaccagccactggctctgcatatggttcatctcagaaagaggagagcgctgcttcgggaggagcagcctacacaaaaaggtatctggaagagcagaagacggagaatgggaaggataaggagcagaaacaaacaaatactgataaagagaagctgaaggagaaagggggcttctctgatgctgatgtcaaaatgaaatctgatccatttgctcccaagacggacactgagaagcccttccgaggcagccagtcacccaaaaggtataagctccgggatgactttgagaaaaagatggctgacttccacaaggaggagatggatgaacaagataaggacaaatgtaagggaaggaaggaacctgagtttgatgatgagcccaaatttatatctaaagtcatagccggtgcaagcaaaaaccaggaggaagagaagtcaggcaagtgggagagcctgcatgcagggaaggaaaagcagaggaaagcagaggagctggaggaggagcctttcacagagagatcccgaaaggaggaacgtggagggtccaagaggagcgaaagtgggcacaggggctttgtgccagaaaagaatttccgggtgactgcatacaaggcggtccaggagaaaagttcatcgcctcccccaaggaagacctctgagagccgtgacaagctgggaaacaaaggagacttttcctcagggaagtcttccttttccattactcgggaggcccaggtcaatgtccggatggactccttcgatgaggaccttgcacgacccagtggcttattggctcaggaacgaaagctttgtcgggatctagtccatagcaacaaaaaggagcaggaattccgttccattttccagcacatacagtcagctcagtcgcagcgtagcccctcagaattgtttgcccagcacatagtgaccattgttcatcatgttaaagagcatcactttggatcctctggaatgacattgcatgagcgctttactaaatacctaaagagagggaatgaacaagaagcagctaaaactaagaaaagcccagagatacacaggaggatagacatttcccccagtacattcagaaagcatggtttgactcatgaggaattgaaaagtccacgggaacctggctacaaggctgaaggaaagtacaaagatgatcctgttgatcttcgccttgatattgaacgccgtaaaaaacataaggagagagatcttaagcgaggtaaatcaagagagtcggtggattccagagactctagccactcaagagaaagatcaactgaaaagacagagaaaacccacaaaggatcaaagaagcagaagaagcaccgcagagcaagagaccggtctaggtcctcctcgtcctcttcccagtcatctcactcctacaaagcagaggagtaccctgaggaagcagaggacagggaggagagcaccacaggttttgacaaatccagattggggaccaaagactttgtgggtccgaatgaaagaggcggcagagctcggggaaccttccaatttcgagcaagagggagaggttggggcagaggaaactattctggtaacaataacaacaacagcaacaatgatttccaaaagagaagccgggaagaagaatgggatcccgagtacacacccaagagcaagaagtattacttgcatgacgaccgggaaggcgagggcagcgacaagtggatgagccgaggccgcggccgaggagccttcccccgggggcggggccggttcatgttcaggaaatccagtaccagccccaagtgggcccatgacaagttcagtggggaggagggggagattgaagacgatgagagtgggacagagaacagagaagaaaaggacagtttacaaccttcagctgagtaggggccactcttgatggagcccttgccggggagaaaggcactgggagaggctggtcgagctaaacaaggagcctcaagaagatcctgaaaaccccaccccacaacccactagccacacagaatcccactacagcagagtgtgtccctggtgctgtctcactggacaggacgctgccaccgagcctacatcaggcccatgtttccagcagagcacactgggctcccgctgctgtttgtgtggggtggggcagggtggggagaaggatgcgatgcttggactttgtgttggttttgtcgtcccatccccactccacccccaattagaaaccaagttttcttaatttcatttcatttggaactaaatgggaatttggttttcaatctcttcctgtcctgagtttttaaaagtccttatatttttcttttttccttttttttgggggggggtgggggatatgtagtaatattagcataaagattttaatttgggcaactttgattcctaagagaaaacaaagcatgtgaataaaaattgaagtgttcacctcaaaaaaaaaaaaaaaaaaaaaaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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