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Previous release (v1)
2026-10-05 18:19:50, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_017321077 8442 bp mRNA linear ROD 07-FEB-2024
DEFINITION PREDICTED: Mus musculus TBC1 domain family, member 19 (Tbc1d19),
transcript variant X9, mRNA.
ACCESSION XM_017321077
VERSION XM_017321077.1
DBLINK BioProject: PRJNA169
KEYWORDS RefSeq.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_000071.7) annotated using gene prediction method: Gnomon,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Updated annotation
Annotation Name :: GCF_000001635.27-RS_2024_02
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Best-placed RefSeq; Gnomon;
RefSeqFE; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 02/01/2024
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..8442
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="taxon:10090"
/chromosome="5"
gene 1..8442
/gene="Tbc1d19"
/gene_synonym="2810453K03Rik"
/note="TBC1 domain family, member 19; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 7
mRNAs, 16 ESTs, 538 long SRA reads, and 99% coverage of
the annotated genomic feature by RNAseq alignments,
including 34 samples with support for all annotated
introns"
/db_xref="GeneID:67249"
/db_xref="MGI:MGI:1914499"
CDS 1554..2627
/gene="Tbc1d19"
/gene_synonym="2810453K03Rik"
/codon_start=1
/product="TBC1 domain family member 19 isoform X4"
/protein_id="XP_017176566.1"
/db_xref="GeneID:67249"
/db_xref="MGI:MGI:1914499"
/translation="
MHLRTFLSFRTHLGLIQVPLKVKDIPELKECFVELGLNTGQLGIDDSTQVPPELFENEHVRIGQKVLAQQDSAAAQQYIRQGSPTALRAELWALILNISSQPEDILYYEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLGHFAYNSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPYKLYQIFREMYVRFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGYLATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAEAVLADLSTLKVMPLLQIFLFATVT"
misc_feature 1788..2444
/gene="Tbc1d19"
/gene_synonym="2810453K03Rik"
/note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
Rab-GAPs; Region: TBC; smart00164"
/db_xref="CDD:214540"
ORIGIN
gccgaaaaaaggtccgggagaagtgtcagcggccaggagtgggaccctgcagcgcattctttccttgccggcggccgtccccgcggctggcgggttagggcaggggaaatgttgcaggaggagtcggacctgtccctcatcattgcccagatcgtccagaaactcaagggctccaatttgtatgctcagctggaacggcaggcctggtcctgtcttcagagacccgagatcagactcgaatcactcaaagaagatattaaggaattctttaaaatatcaggttgggagaagaaacttcagaatgctgtttatagtgaactgaatgtgtgagttttttcctatctattttgagatactattttgttcaactatacttactttgtaagtagtaaaaattattgttgttgtctatacctatactctcattagaatacttacagaattgcaagcaactcaatgtcacagatcactgcagtctagtctgagaaagagtaataaataggtggggcttttctctattaccagctttatatactgagaatgtattcatccaaggtaattaggttttgagatagttctaataatacttacattcttcttattgttgaatttaaaacattaagcttctttctgccattacaaactgaccattataaacgtaatttctttttctttgcaagattattatcattactaaaaacctaaatgtttttatttatcttgatttgccatcagtgcttattaaagtatatagaaattttgctctaaaaaatatagctccagaatgttatcttggtggtttattaaataccccattattcatctgtcattcatggagtgttgcctctgtgctagtgggttgagaagcactcaggatgtagagtagaaacctaagcacacatcctgccctcatggtgtgtataaacagccaaaggaggttcagtgtctgctgttttgttttaccacttggtctgtctctagcatgctgtagtttttaacactccattcccacagtctctgtctaagctatctaactgggaactgagatacgcttgtttaaccacactgcttctggggtaggctcagatgaagacctgtagatttatactttagatgtgcaatttgttaacttttctattgttgtgaagaaactccacatcaaggcaacatataacagaaagcatttaattagggggttgcttactgtttccgagggcgagttcatggccatcttggtggggaccaagacagcaggtggactggcacagtgttggagtaatagttgagaccttatacccgaagcataaggccaaggtttcctttgccaagtcatccttctgcaccccctgagcatctcaaagaacctttggtgtacatgaggaaagcacagggaagctgggaaaaaagaatcttgaagagtttaaatagtatgtgcacagaactgagtatcccactagcacgaaagagaccagctatggagcagaaagagcttctcaataagtggaatgagatgggaacggatgagccagatttaagcctttttcgacccgtttatgcacctaaggactttcttgagttttaggactcatttgggtttaatccaagttcctctgaaagtaaaagacatccctgaattgaaagaatgctttgtagaacttggcttaaacacaggacaactgggaatagatgattctacacaagtgcctcctgaactttttgaaaatgaacatgtgcgtattgggcagaaagttctagcgcagcaggacagcgctgctgctcagcagtacatccgacaaggaagtcccacagcactgagagctgagctctgggcgctcattctgaatatctccagtcagcctgaggatatcctgtattatgagcagcttaagaccaatgtgatccagcacgaccttttggtggacagtctcatttataaagatgtgaagctgacagcaagcaatgatgattactattttgtatttgaagattatttatatcaggtgttactttgcttttcacgggatacgtctgtactgggccactttgcatacaacagtgcttcaccgccgaagtcatacatcagaggaaaactaggattagaagaatatgctgttttctatccgcccaatggtgtcatccctttccatgggttttccatgtatgttgcaccattgtgttttctgtatcatgaaccttacaaattgtatcagatattccgtgagatgtacgtccgctttttcttcagactccactccatctcctctcatccttctggtattgtgtcactctgtttgctgtttgaaactcttcttcaaacgtatcttccccaactcttttatcatctgcgagaaattggagctcaaccacttcggatatcatttaaatggatggttcgagctttttctggatacttagctacagatcaactcttgcttttatgggatagaattctaggatacaactctctggaaatacttgctgtgctggcagctgccgtgtttgctttccgagcagtgaacctgatggaggtgacatcactggctgcagctgaagcagttctggctgacctttctactttaaaagtcatgcctcttcttcaaatttttctgtttgctaccgtcacctgatcttcgaggtcgctgacaacacctctagtttttcattagaaactaatcatgaactatgcaaacctgcatacatccagaattaaactttgcacataagccaataaagatcatgttccctcctccgttaaacctaagaagttttcactttttaaaacaataaccctacacaccaaatactgcgcttgcatgctgatgattgtcaagagagaagcaatagacatcagttctgctgaagcgagcatcctccatgcagatccctaactggtaacaggctcgtaccatatatgcaataagaactaacgacactgtaataaacttgaagaagtaacacagcttcttgtcagtttgtaaacttctccctagataataattttattttataaattgttccccactaaaactaattggttggatggggcttgaaaaggcttgaaaataatgtatttgagtggaatttaaatgtactttggtattttttatcaacttttaatttatgatggattttttcatatccctcccattttatttctccattaaacatctctactgggaaaaggtatacagatatctctaataatcttttgacttgtttttgttgttgctttttttgagacagtcttatatagtccagtcttatatagctactcactgtgtagtagaggatgactgagttccagatcccctcgtctccatctgccaagcgctgggattacaggtgtgtcccaccccacctaccccatctgatgctaggttattctttccattggaagtccctttgcacttccccgcctcccatcttttacacagaagccttgatactgctgatgctgatggtgatgcttggtgccagattctgttttccttggaagaatacaaggaggaggaatcaaacccagctctgttttgctgagcttggtgcttctagattgccttcagagcagaacagcttaaaaacaccacaagtgtttgttcatcctagaacgggagccactgttcaaggcactgggtcttattttaatgtttattataagcaaagcattttgatttgttttatatttcttgatgatatgccatttcagtacatggaataatgtaaaggaattgtcttctgattttagataaaaattgaagatgctgatcactctaaaaaaactcaaatcaatagattgacactctccttatctgaaatttattaggtcttatccaaatgtatcttagaaatctgttattttcacagcatatattaggaaaactatgatattcaacataatacttcaagtgtggtgaaatttggtgtcaatagcttaccgagaatctaagttctctcattcatcaggtacttgctgacttagtgaagtctaaacaatttactctgtgtttgagtcttaataagtccccatcttactgtttttggtgacacatcatgtcatgtgtcttgccatcctgcatgtccaggtgcccctccatggagaggacaagcatgattctggggctagtgtccccctttgtcacagtgtcaaaactattaggaagcagttgtgttttagataattagtagagcggtacccatgccaatctttaagctttttaaagaaaaatataattttactagagatattgtagttacctgatacactccatcagagagttctcctaaataattagatctgttttgggcagttaagcgggataccaaacagtaacaaattattgtttctgctgtgtttacctcacacaattatggaggaccacatgagtaaatatatatggaagtgattttcttaaaccttaaaagaccaatcaaatgtggtgttactaattcttatgtaacagattaactccaactgctagaaggtaacatgaaaaatgcccagcttgattggcatgtctgttgtatttcttgacagcttgaaatgatgtgtgttgagaaatgaatctttccaggatggtgctttcatttagtgcagtctactctagctggttgctctgaattttagtcccagaccaaagctggtaggcaaccttatactttgccactatggcaaccccgcattgctggtgttacctgctgggtaagcactaaagagagagccgtcaggccgctctgcccattccatccctaactgtgcttcttcaccctgcctcctgtgctttctctgatcaaccatcgacacccccttccttctgctctgccggtgaccacagaagtctggaaagcaagtgatgaccatgagcatatagtgaaacagcctcacaggcaggttatgtttcgttcttctgaactcagtccactaacacacaccatggctttaggtatggaagaacatgtctaacaatccctggaccagggtgttttgctactgcagtagcagtataactaaatgaatgactaaaatgcccagcttgatttaactgcctgtccagtgcttcttgctcagctggggctctctcctctcactccatagggagaagaaaaaccaataagctctcaccttttccacttggtagtctaaagcttagcttgatccccatatgtaatttcttccttcttgtctcaagaagtctttaatctatttctatcattctttaaatcctgactagtctgagttatttctgtctttacaaagtttcactacttgttgcttaaaggataaaaatctctgctcatcagcatagcagcaataattcctcatgcctggccttttgatttctttgtcccatgatgatcttcagccagttccagatggtcatctcctctctgtagaaggaacccacatgttcaaggtcctactcagaaaaggctcttcagttgccaagatgcactggatcctacacattatagttattcctgtgtctttgttcatccattaatgtggtgcttataatagtgggtattagtatggtcatcatcattgacttcctagctgtccaagtcgcaagaagagattgtctgcatgagtttgtatttcctgagttgttccaaactttttggaatacattttttcttaaacacaaatagtctcatccttccacaaaggctctgagctctactcatagtttgtctcttaaccccaagctctctgggttggtcaagcagtcacatgtgccatcctactagccatggaatgaatgactttgatatcaactcaaaaatctatgaccagtgaaagccaaagacacttggttaggagactctgatttaacctttcagggaaactgaatgtaagaaagaaagactatgacccagctccggtatctagtgaacggagagacagaaaagctgcccttggttcttgtgggtccccggaatgcaccccagtagccttctgctggacccttttgtatgtaggtcaaaggattgcctttgttctttgcaacagcaaggattctaacgtctgtaggtattttcctttgaggcttgagatctattgggtgtagaagctcagtccacaccctgttcaaaatggtgtaagacttctaaattccttgagtcaaggcagaactgtggccttacaagaataaagcctatcttcggtgcctacctaatatccctaactaggctctttgacctttggccctttgtcctataactccctcacttagaatgctttctcttctcttcttacctaactacaacttgtacctcagaacctacctcaggtgacgcatcatcaggaagaccgctcctcataccctaagtcagcccatgtcacaccactgtcctacttgtctttgttctctgctacatggtaactcctcaagggccaaaaatggtctcattttagctttgcacttctagagccaaacagtccttgccccattacaggcttgctaaatgtttataagtgaatggatggggccatctaactcagtagtcattttcctcttgatggcgacactgttcagagtgacatcttgtccagcatcatgtagccattttacctttagtttactaaagagaaagttttaaagggaataatatctttagaggagaaaattaatgctttattttttcatttaagtgaatacatatatagtaaaactgaacatatgtaaagtagaattctctttaagtgtacagtttggtataaatggatgtacccatgtcacctcttttaataattgaggtagcagaatgttcccctcacctaagacagtagatccctatatgcccttcctattcagtctcctgcacactcacagatggggactccaaaccgtcacagaactgtggctagccctaaagactagcctttcttctctagaggttcaactctatactcttgtgtctggcttgctctacttggcataatgtgctgggattcatactgtggcattggtagttcactgtcgattgtggctgaatacatatcttcatagaggcatgcatcttccttcccctgaggcaaatgccaagtataacggatactgtgagtcatatatccgtacttgtttaccttcctaagaagtcttcaggttcttgtgtgaagtgattccaccatttacactcccaccaacagtggaggagttgcagtggttcccagtcctggttgtcaatgtattaattaagttaataggtgggcatgttttattttttctgttatttccccagttagatagaacagcaccttattatgctttgttgctgtttatacataagttattattttatagtctactcttttgttcatttaaatcagttaccttcttattacattttaagacttatttattgtggatatagcatagaaatcccattatgcattataccttattttttattaactataccctttttctttttaatttttatttaaaaatttaccctcactcatatttacataaaatttattattccccccccccccccgcacaacactaattacctttttcaacagcaaaagcttttattttgttgaaaacaaatttggcatttttttttcttttaaagggtttttgtgtactatctataaaatccttgtgtaactcagttacacatactttccccatgttttcctctataaattttataaatttagttcattcatttagagctatgtttctttttctttagttcctttaatgtatgtgtgaggttaagggctaaggttcatgttttcactctggtgcccacctttgctaagcaggccacctttccatgctgcatcacgcctctataaagtcaggaggagggactcgctggcatctgacttgacttcatttcctgtggatttgtgtctgttctcactgcaatagtatagcatcttgatttttgtggatttagagcgagtcttgggattgacagtacaactgttcacttaggtcaaaattatttaagctatgtcagtattattgcttataacttttagaatcagcattttggttttttcacaaaatagtttgttaggatttttttttaatagacagtattagccctataataggcttagggacaattgatatcatagtattgagctatccaatccatgaacacagtatatctttttatttacttagctcttttaaattttcactcaataatatattttagttttgagtgggcagttcttgcattcattttgtttaaaatatccctagatatttcacatttctgttattgtaaattatatttttaactttaaatttccagtgtcttgttaatatagacaaatacaactaaaccttttatattgaccctgtatcctaaaatcttgaaaaacttaatacttctgttatcttttttggtagcttccctaggattttctacatatataatataccaactgcaaataaagattatattgcttctttcaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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