LOCUS       NR_186735               2112 bp    RNA     linear   ROD 05-JUL-2023
DEFINITION  Mus musculus zinc finger protein 410 (Zfp410), transcript variant
            14, non-coding RNA.
ACCESSION   NR_186735 XR_004937528
VERSION     NR_186735.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Vinjamur DS, Yao Q, Cole MA, McGuckin C, Ren C, Zeng J, Hossain M,
            Luk K, Wolfe SA, Pinello L and Bauer DE.
  TITLE     ZNF410 represses fetal globin by singular control of CHD4
  JOURNAL   Nat Genet 53 (5), 719-728 (2021)
   PUBMED   33859416
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Campbell GR, Baudhuin A, Vranizan K and Ngai J.
  TITLE     Transcription factors expressed in olfactory bulb local progenitor
            cells revealed by genome-wide transcriptome profiling
  JOURNAL   Mol Cell Neurosci 46 (2), 548-561 (2011)
   PUBMED   21194568
REFERENCE   3  (bases 1 to 2112)
  AUTHORS   Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND and Robson P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   4  (bases 1 to 2112)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   5  (bases 1 to 2112)
  AUTHORS   Pritsker M, Doniger TT, Kramer LC, Westcot SE and Lemischka IR.
  TITLE     Diversification of stem cell molecular repertoire by alternative
            splicing
  JOURNAL   Proc Natl Acad Sci U S A 102 (40), 14290-14295 (2005)
   PUBMED   16183747
REFERENCE   6  (bases 1 to 2112)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   7  (bases 1 to 2112)
  AUTHORS   Benanti JA, Williams DK, Robinson KL, Ozer HL and Galloway DA.
  TITLE     Induction of extracellular matrix-remodeling genes by the
            senescence-associated protein APA-1
  JOURNAL   Mol Cell Biol 22 (21), 7385-7397 (2002)
   PUBMED   12370286
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC159649.3.
            
            On Jul 5, 2023 this sequence version replaced XR_004937528.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849383,
                              SAMN00849388 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-57                AC159649.3         168334-168390
            58-237              AC159649.3         173028-173207
            238-373             AC159649.3         174100-174235
            374-592             AC159649.3         176787-177005
            593-784             AC159649.3         178495-178686
            785-910             AC159649.3         188832-188957
            911-1051            AC159649.3         189858-189998
            1052-1254           AC159649.3         190267-190469
            1255-1382           AC159649.3         191318-191445
            1383-2112           AC159649.3         194211-194940
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 39.15 cM"
     gene            1..2112
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /note="zinc finger protein 410"
                     /db_xref="GeneID:52708"
                     /db_xref="MGI:MGI:1289280"
     misc_RNA        1..2112
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /product="zinc finger protein 410, transcript variant 14"
                     /db_xref="GeneID:52708"
                     /db_xref="MGI:MGI:1289280"
     exon            1..57
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            58..237
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    205..1074
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="COORDINATES:
                     alignment:Blast2seq::RefSeq|NM_144833.4"
                     /note="primary ORF has stop codon >50 nucleotides from the
                     terminal splice site; nonsense-mediated decay (NMD)
                     candidate"
     exon            238..373
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            374..592
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            593..784
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            785..910
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            911..1051
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1052..1254
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1255..1382
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1383..2112
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gtgtgtggacgggattcggggctgactgacggacggacggctgcccgagactggaaggttaaattgattaccaacctagttcagcatcttacaggaaaagtgtaatgctttttaaagggatatgaatataacaggaaggtgtcattgactgaattagacttgaacctgtccctgatcagctacaggatttcagaagctgaatcaatgttatcagatgagttagaatccaaaccagagctcctggttcagtttgttcagaatacctccatccccctgggacaagggctagtagaatcagaagctaaagacattacttgcttatccctccttccagtgaccgaggcctcagaatgcagccgactaatgttaccagatgaaactccaaatcatgctaattcctccaaggaggtcccttcttcagctgttttgaggagccttcaggtgaatgtgggcccagacggagaagagacaagggctcagactgtacagaagtccccagagttcctgaccacaccagagtcgcctagcttgttgcaagatctacagccaagtgatagcacttccttcattcttctgaacctaacgagagcagggctgggctcttcagctgagcactttgtgtttgttcaggatgagacagaggactcaggggctgacttcctctctgctgagagcacagacagcagtatcccatggttcctccgggttcaggaactggcccatgacagtctgattgcggctactcgtgcacagctggccaagaatgcaaaaactggcagcaatggtgagaagcctcatcagtgccaggtctgtgggaagaccttctctcagagtgggagtaggaatgtgcatatgagaaagcatcacttgcagctggggacaactgggagtcaagaacaggatcaaaccgccgagccactaatgggcagtagtttgcttgaagacgcttcagttcccaataaaaacctggtgtctatgaattcccagtccagccttggtggagagtccttgaatctatcaaataccaattctatccttggagttgatgatgttatggaagagcttaacttttaaaacatttaaacagagcataaccaggttttacagaggagatacaaagcaatttctccataccttcaaaagccatgtcttctggagaacagaaagggctctctaggaaacagttgctcctctggtatagaaatttcacccagcttacacaggccaggccctcttctctgaaaatcttaccagaggtgcttactgaaagagcctcacggcccctgtcttctgtgcctgatgtgacacatcacttggtgaccatgcagtcagggaggcagtcctatgaagtttctgtcttaactgcggtaaatccgcaggagttactaaaccaaggagatttaactgaaagacagacatgagtgtgctgactcctggagatgctgttgtctgatcccagagtgcatgatgggaacagatccaaaggctcataatctgccagaactaaaaggagtctgaaggaccaagaccttgccttgcctctgttgtctgagggctctcttcaacctccaccgatgcagtccaagagtgaagcagtggccgtgggctggatacctgtgccgcctctctcctcagcgcagcgtttgggagtagacttgccaagagcaggtttaattatgtgttggctgaagattttcattgtgactgtcaaggttttcctttgaagagttttcaccctaggcccagctatctttccatatggttgaattatgtcctgcttccaaccagaacactgagttttcaagatgccttgttgctttgaagaagggaggggtgccaattacactgtagcattgcactctccctttagcaacctgagtaagacttagcctttgggctgtaaaaattaaattacttgaatctctccttggcccaggctgaggtaccaacttaccctgtacactttgacttggtcatttttttgttttgtttatgggacttaaaatagcatgttatcagggggttttatttgttgttgttgtttttttttaagttaaaaaccacatgatctagagtttgttttccttttaaataaacaaaacaacctagtca

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