LOCUS       NR_184565               1139 bp    RNA     linear   ROD 03-MAY-2024
DEFINITION  Mus musculus succinate dehydrogenase complex assembly factor 3
            (Sdhaf3), transcript variant 6, non-coding RNA.
ACCESSION   NR_184565
VERSION     NR_184565.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Dennis,R.A. and McCammon,M.T.
  TITLE     Acn9 is a novel protein of gluconeogenesis that is located in the
            mitochondrial intermembrane space
  JOURNAL   Eur J Biochem 261 (1), 236-243 (1999)
   PUBMED   10103055
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122240.4 and AC146599.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784646.979192.1,
                                           SRR13422600.1491350.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849382, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-197               AC122240.4         199239-199435
            198-331             AC122240.4         200239-200372
            332-1139            AC146599.3         132361-133168
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 2.83 cM"
     gene            1..1139
                     /gene="Sdhaf3"
                     /gene_synonym="0610005M07Rik; 4933430A16Rik; Acn9"
                     /note="succinate dehydrogenase complex assembly factor 3"
                     /db_xref="GeneID:71238"
                     /db_xref="MGI:MGI:1913288"
     misc_RNA        1..1139
                     /gene="Sdhaf3"
                     /gene_synonym="0610005M07Rik; 4933430A16Rik; Acn9"
                     /product="succinate dehydrogenase complex assembly factor
                     3, transcript variant 6"
                     /db_xref="GeneID:71238"
                     /db_xref="MGI:MGI:1913288"
     exon            1..197
                     /gene="Sdhaf3"
                     /gene_synonym="0610005M07Rik; 4933430A16Rik; Acn9"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    24..278
                     /gene="Sdhaf3"
                     /gene_synonym="0610005M07Rik; 4933430A16Rik; Acn9"
                     /inference="COORDINATES:
                     alignment:Blast2seq::RefSeq|NM_001417720.1"
                     /note="primary ORF has stop codon >50 nucleotides from the
                     terminal splice site; nonsense-mediated decay (NMD)
                     candidate"
     exon            198..331
                     /gene="Sdhaf3"
                     /gene_synonym="0610005M07Rik; 4933430A16Rik; Acn9"
                     /inference="alignment:Splign:2.1.0"
     exon            332..1139
                     /gene="Sdhaf3"
                     /gene_synonym="0610005M07Rik; 4933430A16Rik; Acn9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

accttctgcgcaggcgcggcgcgatgccggggaagcatgtctcgagagtccgggctttatataggcgaatcttgctgctacatcgggctctgcccccggacctcaaagccctgggtgaccagtacgtgaaggacgaatttaggagacataagactgttggtcctggcgaggcccagcgattcttgaaggaatgggagaatgaagggggagaaagagtattgcatgatgctgaagagtcttgcaggatctcctcccatcttgaaaatatcaggaggtgaaaggagttgggcatttctagagtgcatctaggtattttaaagaaactgctctgacgtacgcagcagtgctgtggcaacaagctgaggacagcagacaaagctcaactggaaaagcgtgttttggcacctctctcccagaagaaaaactcaatgactttcgtgatgagcaaattggacagttgcaagagctgatgcaagaggctactaaacccaataggcagtttagtatcactgagtctacaaaaccacagttgtgatacatgatcttaacaaagtggctacatttataacctgttacctcatctaccattgactctctaaaatatattctttcagctacagaatagtctcttatttttggacagtatgaacaatgcatgatcaaaatcataaatgacgcacttgtcatcattgcaatgacatatttatttgctgtgtggaatgtagttttatggaatttaatttctggactaaagaaaggtgttaaaaaagatatactttgggattatgctgaaatttttttgtatatgaatttgttttaaattctatccccatcaagtgttagcctcctgatttgtctctagcttcatcagttaaataaacatatcataataatggaagatgtagaattccaataagtttgctattagacatattgtgattctgaaagtcccaccatttctcctttagtagtacacacctggctatcactcagaatttcatctatgagtcacgttgaaagttttaagaaaagccttaagattcaattgttaagaatttcagttattgtctaaaggttggggagatgaaaaatactaagttggctcatacatttaaaaataaattatctatcaaaacctg

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