2024-09-28 09:29:24, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NR_151620 847 bp RNA linear ROD 20-DEC-2019 DEFINITION Mus musculus prospero homeobox 1, opposite strand (Prox1os), long non-coding RNA. ACCESSION NR_151620 XR_373845 VERSION NR_151620.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 847) AUTHORS Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM, Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming LG. TITLE The Vertebrate Genome Annotation browser 10 years on JOURNAL Nucleic Acids Res. 42 (Database issue), D771-D779 (2014) PUBMED 24316575 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK142161.1 and BE943617.1. On Oct 17, 2017 this sequence version replaced XR_373845.1. ##Evidence-Data-START## Transcript exon combination :: AK142161.1, BY730214.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849379 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-828 AK142161.1 2-829 829-847 BE943617.1 1-19 c FEATURES Location/Qualifiers source 1..847 /organism="Mus musculus" /mol_type="transcribed RNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="1" /map="1 96.07 cM" gene 1..847 /gene="Prox1os" /gene_synonym="Gm17566" /note="prospero homeobox 1, opposite strand" /db_xref="GeneID:102632463" /db_xref="MGI:MGI:4937200" ncRNA 1..847 /ncRNA_class="lncRNA" /gene="Prox1os" /gene_synonym="Gm17566" /product="prospero homeobox 1, opposite strand" /db_xref="GeneID:102632463" /db_xref="MGI:MGI:4937200" exon 1..133 /gene="Prox1os" /gene_synonym="Gm17566" /inference="alignment:Splign:2.1.0" exon 134..831 /gene="Prox1os" /gene_synonym="Gm17566" /inference="alignment:Splign:2.1.0" ORIGIN
actctctctctttctctctctctttcttttcactctctctctctctccccctctcttcttctcttgcgggcagagaagaaacccacgcgcgcacgcggtgatgtcttactggtgataattggcccaggggtcgttatgaacatacctctctctgcttgaggaccagctcagcccctcatgtccccgaaatgctttgcaaagacaccgctcacccgcctgtgtcttcttttgagctctggagcactgttgattgatcatccgtgtaagccaatcctatacaagtccaccctgtttaaccaggtcaaacgcaaatgccttccgtgttctgtcagaagagtgcatgtgcccggagggtgaggatcaatgcttctctcgcaccaattaagaccactctttgactgctcacagcaaatgttcccgaacagtggatttggaggaggggttctgcttttctcagaccgtgagaggcatggatcacagcatctgtagctgagtggcgtgttaccgtaggaagagagaagcctctcttgatacttatgtgtagctttagcgtagatctgtcgcgttagtctcaccagccaaactgatctcctcacatacagcatctctgctcccaacggtgaggagcagcgaggcaggaagagctgcctaggcttgctgtggcacgcctccctgggtgctctatcttaccttgtgtcagccgtgctatagatgacccctcctatgtctaagcagtgttgaaaatattgttttagttcaatatatagccatctctaacgaaatctgtgctgttttagcagaattattaataaacagttttctttccgctcaaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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