LOCUS       NR_110572               1305 bp    RNA     linear   ROD 05-AUG-2023
DEFINITION  Mus musculus zinc finger E-box binding homeobox 2, opposite strand
            (Zeb2os), transcript variant 1, long non-coding RNA.
ACCESSION   NR_110572 NM_001177394
VERSION     NR_110572.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Beltran M, Puig I, Pena C, Garcia JM, Alvarez AB, Pena R, Bonilla F
            and de Herreros AG.
  TITLE     A natural antisense transcript regulates Zeb2/Sip1 gene expression
            during Snail1-induced epithelial-mesenchymal transition
  JOURNAL   Genes Dev 22 (6), 756-769 (2008)
   PUBMED   18347095
REFERENCE   3  (bases 1 to 1305)
  AUTHORS   Nelles L, Van de Putte T, van Grunsven L, Huylebroeck D and
            Verschueren K.
  TITLE     Organization of the mouse Zfhx1b gene encoding the two-handed zinc
            finger repressor Smad-interacting protein-1
  JOURNAL   Genomics 82 (4), 460-469 (2003)
   PUBMED   13679026
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL935127.9.
            
            On Feb 19, 2014 this sequence version replaced NM_001177394.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript.
            
            Sequence Note: The RefSeq transcript was derived from the reference
            genome assembly. The genomic coordinates were determined from
            alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC031611.1, SRR7345562.4297787.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-165               AL935127.9         24320-24484
            166-316             AL935127.9         26025-26175
            317-1305            AL935127.9         26281-27269
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 27.31 cM"
     gene            1..1305
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /note="zinc finger E-box binding homeobox 2, opposite
                     strand"
                     /db_xref="GeneID:433424"
                     /db_xref="MGI:MGI:3652108"
     ncRNA           1..1305
                     /ncRNA_class="lncRNA"
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /product="zinc finger E-box binding homeobox 2, opposite
                     strand, transcript variant 1"
                     /db_xref="GeneID:433424"
                     /db_xref="MGI:MGI:3652108"
     exon            1..165
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /inference="alignment:Splign:2.1.0"
     exon            166..316
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /inference="alignment:Splign:2.1.0"
     exon            317..1305
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

cgctgtgcctcgaggattagtttaaacagcgggctataaaagatgtaacagatgcaaactgtaacacaagggccattaaccctttctctgccgcccagcacgcccagtccctacaccctgcacctattgtctccggtgccacaagctttgcggaaaacctggaaattttggccagaaatggtgagaagaaaaagcatgaagaagccgcgaagtgtgggggagaaaaaggtggaggcgaagaaacagctcccggagcaaactgaacaaaacctcgccaagagtgtctggaggcaggaccgttattcctgccgagcaggggagagaagagagaccctgaaacacgcgccacctatctttgtggggagggataattgaagcgccctgagcgtgagcatcatgtgaaaacgtgatcgccaagtttctctctgggaaaggatctgggatagattataccttgaagtctccgcaaacgctttagtggaagaaatgaaattccacctccctcccttcctctctccctccctcccttctccacgccccccccccccccccccccccccgtcaagcaagcctttggcatcattatcctcatcactaaatcctgcagagtactgggcggaaaacggtgcacaccattcacagaactggagaactccaaggggcgaaagttaaagggaaagctctcgggtcttccatgcagatctcttgtcttatacagatatctctggtgactaggtttgaggtgcacgtcaagttgtatggatacctcaagcaccgtttttggaactaaattcttgccctttctcttattacatttttttttttaaagatgccagagctaggggagggaaatgctacttgtacactgcatcttaggatctcagtgtgcagtgtatgtgtgtatgtgtgtgtgtgtgtgggggggagattttctggattggatccctatattaaaagtttggcattttaataaagggtctctaggttaacatagagctgtactatgctggccaatctctggacccctctacacctcatgcagaccacattacaaagtgaggggacaggggcaggaggaagaaggagaaaggtcagaggaacttaggacgaaagaaagaagagggtgacactaaactgtgtggggtctaagttttgaagtgcatatttttgatattgcaattaaactaaaattaaaaagaaaagactccacctttgctctgaagggattggttatgcaaatatggaagggatttcctggagaatacagctttctactgtatggttaattaaataatcactcaaaaa

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