LOCUS       NR_110571               1223 bp    RNA     linear   ROD 05-AUG-2023
DEFINITION  Mus musculus zinc finger E-box binding homeobox 2, opposite strand
            (Zeb2os), transcript variant 2, long non-coding RNA.
ACCESSION   NR_110571 NM_001177395 XM_001472634
VERSION     NR_110571.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
REFERENCE   2  (bases 1 to 1223)
  AUTHORS   Beltran M, Puig I, Pena C, Garcia JM, Alvarez AB, Pena R, Bonilla F
            and de Herreros AG.
  TITLE     A natural antisense transcript regulates Zeb2/Sip1 gene expression
            during Snail1-induced epithelial-mesenchymal transition
  JOURNAL   Genes Dev 22 (6), 756-769 (2008)
   PUBMED   18347095
REFERENCE   3  (bases 1 to 1223)
  AUTHORS   Nelles L, Van de Putte T, van Grunsven L, Huylebroeck D and
            Verschueren K.
  TITLE     Organization of the mouse Zfhx1b gene encoding the two-handed zinc
            finger repressor Smad-interacting protein-1
  JOURNAL   Genomics 82 (4), 460-469 (2003)
   PUBMED   13679026
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC065800.1 and AL935127.9.
            
            On Feb 20, 2014 this sequence version replaced NM_001177395.1.
            
            Transcript Variant: This variant (2) lacks an exon and contains an
            alternate 5' terminal exon, resulting in a shorter transcript,
            compared to variant 1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC065800.1, AA423542.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-755               BC065800.1         1-755
            756-1223            AL935127.9         26802-27269
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 27.31 cM"
     gene            1..1223
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /note="zinc finger E-box binding homeobox 2, opposite
                     strand"
                     /db_xref="GeneID:433424"
                     /db_xref="MGI:MGI:3652108"
     ncRNA           1..1223
                     /ncRNA_class="lncRNA"
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /product="zinc finger E-box binding homeobox 2, opposite
                     strand, transcript variant 2"
                     /db_xref="GeneID:433424"
                     /db_xref="MGI:MGI:3652108"
     exon            1..83
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /inference="alignment:Splign:2.1.0"
     exon            84..234
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /inference="alignment:Splign:2.1.0"
     exon            235..1223
                     /gene="Zeb2os"
                     /gene_synonym="Gm13476; Zeb2nat"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

ttctgcttagaaaacagccttctccggtgggaaaggttagactagtctgccagatctaagagaaggacttgctcccgaatttgttttggccagaaatggtgagaagaaaaagcatgaagaagccgcgaagtgtgggggagaaaaaggtggaggcgaagaaacagctcccggagcaaactgaacaaaacctcgccaagagtgtctggaggcaggaccgttattcctgccgagcaggggagagaagagagaccctgaaacacgcgccacctatctttgtggggagggataattgaagcgccctgagcgtgagcatcatgtgaaaacgtgatcgccaagtttctctctgggaaaggatctgggatagattataccttgaagtctccgcaaacgctttagtggaagaaatgaaattccacctccctcccttcctctctccctccctcccttctccacgccccccccccccccccccccccccgtcaagcaagcctttggcatcattatcctcatcactaaatcctgcagagtactgggcggaaaacggtgcacaccattcacagaactggagaactccaaggggcgaaagttaaagggaaagctctcgggtcttccatgcagatctcttgtcttatacagatatctctggtgactaggtttgaggtgcacgtcaagttgtatggatacctcaagcaccgtttttggaactaaattcttgccctttctcttattacatttttttttttaaagatgccagagctaggggagggaaatgctacttgtacactgcatcttaggatctcagtgtgcagtgtatgtgtgtatgtgtgtgtgtgtgtgggggggagattttctggattggatccctatattaaaagtttggcattttaataaagggtctctaggttaacatagagctgtactatgctggccaatctctggacccctctacacctcatgcagaccacattacaaagtgaggggacaggggcaggaggaagaaggagaaaggtcagaggaacttaggacgaaagaaagaagagggtgacactaaactgtgtggggtctaagttttgaagtgcatatttttgatattgcaattaaactaaaattaaaaagaaaagactccacctttgctctgaagggattggttatgcaaatatggaagggatttcctggagaatacagctttctactgtatggttaattaaataatcactcaaaaa

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