2024-09-28 09:25:39, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NR_027920 2188 bp RNA linear ROD 18-OCT-2021 DEFINITION Mus musculus msh homeobox 1 opposite strand (Msx1os), antisense RNA. ACCESSION NR_027920 VERSION NR_027920.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2188) AUTHORS Babajko S, Meary F, Petit S, Fernandes I and Berdal A. TITLE Transcriptional regulation of MSX1 natural antisense transcript JOURNAL Cells Tissues Organs 194 (2-4), 151-155 (2011) PUBMED 21625063 REFERENCE 2 (bases 1 to 2188) AUTHORS Petit S, Meary F, Pibouin L, Jeanny JC, Fernandes I, Poliard A, Hotton D, Berdal A and Babajko S. TITLE Autoregulatory loop of Msx1 expression involving its antisense transcripts JOURNAL J Cell Physiol 220 (2), 303-310 (2009) PUBMED 19334036 REFERENCE 3 (bases 1 to 2188) AUTHORS Babajko S, Petit S, Fernandes I, Meary F, LeBihan J, Pibouin L and Berdal A. TITLE Msx1 expression regulation by its own antisense RNA: consequence on tooth development and bone regeneration JOURNAL Cells Tissues Organs 189 (1-4), 115-121 (2009) PUBMED 18728357 REFERENCE 4 (bases 1 to 2188) AUTHORS Coudert AE, Pibouin L, Vi-Fane B, Thomas BL, Macdougall M, Choudhury A, Robert B, Sharpe PT, Berdal A and Lezot F. TITLE Expression and regulation of the Msx1 natural antisense transcript during development JOURNAL Nucleic Acids Res 33 (16), 5208-5218 (2005) PUBMED 16157866 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 2188) AUTHORS Blin-Wakkach C, Lezot F, Ghoul-Mazgar S, Hotton D, Monteiro S, Teillaud C, Pibouin L, Orestes-Cardoso S, Papagerakis P, Macdougall M, Robert B and Berdal A. TITLE Endogenous Msx1 antisense transcript: in vivo and in vitro evidences, structure, and potential involvement in skeleton development in mammals JOURNAL Proc Natl Acad Sci U S A 98 (13), 7336-7341 (2001) PUBMED 11390985 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC114671.14. Sequence Note: The RefSeq transcript was derived from the reference genome assembly. The genomic coordinates were determined from alignments. ##Evidence-Data-START## Transcript is intronless :: SRR5189673.187304.1, SRR10662772.1712362.1 [ECO:0000345] ##Evidence-Data-END## COMPLETENESS: full length. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-2188 AC114671.14 7435-9622 c FEATURES Location/Qualifiers source 1..2188 /organism="Mus musculus" /mol_type="transcribed RNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="5" /map="5 20.21 cM" gene 1..2188 /gene="Msx1os" /gene_synonym="Msx1as" /note="msh homeobox 1 opposite strand" /db_xref="GeneID:93895" /db_xref="MGI:MGI:2136762" ncRNA 1..2188 /ncRNA_class="antisense_RNA" /gene="Msx1os" /gene_synonym="Msx1as" /product="msh homeobox 1 opposite strand" /db_xref="GeneID:93895" /db_xref="MGI:MGI:2136762" exon 1..2188 /gene="Msx1os" /gene_synonym="Msx1as" /inference="alignment:Splign:2.1.0" ORIGIN
tatattacatagtacacacacagtcccttcaaaagggatgcttgagagccacgaaaatgtactgttaaatagaaacagattttggttttttttttttttttttttacttctttttttctggtcctgggaaagtctctttaacctaccttggtgaagcaccagcatgcgccctgccccctcagagcaatgctttgctgccaaagcgcttagagtttgacagtggaaggagctgggctccttgctttctatagggctgggctcatctcttgaagcaccgattagcaatttctctgtgcaagtcctgcctggtttcaggaccggaagcagctgatggagtctcatggcctctagtccttttggcctctggtctccttcagcctctaattctgctggggaccacggataaatctcttggcctctgcacccttagtttccacatttataacttgcgcatgtaaatctagatttttctcgaaaaacctagacacttccgaccattctttttcttcccagaaggggtcagatgaggaaggtttaggaagcgacaaccaggaggaagtgtgtagcaaggggtttaagagaagggaccaggtggtatagggcagcagagcttcctaggaaggactcccgctgctctgctcaaagaggtggctggggaggggatggcaccacagggaggtgactctggacccacctaagtcaggtggtacatgctgtagcctacatgggcggtgtagagtcccacgggcgctacaggcagcgcggcgcgctggaaagggccagaggcactgtagagtgaggcgcccgcagctgcagccaccgctgcaggaccgccaagaggaaaagagaggccgaaggcagcaggcggcaacatgggtttcgcggccatcttcagcttctccagctccgcctcctgcagtctcttggccttagcgcgacggttctggaaccagatcttcacctgggtctcggtgaggctgagcgagctggagaattccgcgcgctcggcaatagacaggtactgcttctggcggaacttgcgctccagagccagcagctgagctgtggtgaaaggcgtcctgggcttgcggttggtcttgtgcttgcgtagggtgcatgctgggggactcagccgtcctagggggccaggagagggggaaaaaaaaagcaaggagttaaagagagtcttgtgcttgcgtagggtgcatgctgggggactcagccgtcctagggggccaggagagggggaaaaaaaaagcaaggagttaaagagagtcttgctggggtgttttactaaggaaccgaaaacattccaggtattaatttcgttcagacgcgtctgtgctgggcactgtgaggcacttgagaaatattttctcttgcctgctaaaatgctagatgaaatctaagcatgttcaacgctggaatacagttgagcagagacagtgccaacctaccttaaagtcaagccttccccaccaggtgcctcttctgcgcctctcacattggaaagatgaaggctgggggcagggggtggtcataaaacactcaggggccctttgcccagtccaaagtcacccaggtttcataccatagacatacacttgtatttgtgcccgacaaatgcaccgcgttggggctaggcctttgcatcgcatagaatggatcttgaaactccacactttctatcaaacaacatgtttctcctgggctctagggccaatcaaattagagagccatccaagaagtcacactgtgacaattctaaaatatgtatggggctgtttatgtagatatctgccatttcagttgccctcggttttccctacagcctctccaaacctcagcgcctgggaccacatcaagcatagtgtgtatcgggagttggggggcagggtccccagtctgacgaaactggttatgtccacctgccctttctttcagtttcctgagtaaagcttaaatctccaatagagtgctgtcactgttgggcaggcctagttaggggaccgagtttcagtcctgctatgcctaacaaaaccattacagaataaaacaaacctcaaccacacgctccccaccacttagttattgagaacatcttcgggttttgcctagctatgctttttttttttttaagctctaataaaacaataatcctttgggccctcagaccaccaggatgtaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]