2024-09-28 09:27:38, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NR_004444 2487 bp RNA linear ROD 04-AUG-2023 DEFINITION Mus musculus zinc finger homeobox 2, opposite strand (Zfhx2os), antisense RNA. ACCESSION NR_004444 VERSION NR_004444.2 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2487) AUTHORS Komine Y, Takao K, Miyakawa T and Yamamori T. TITLE Behavioral abnormalities observed in Zfhx2-deficient mice JOURNAL PLoS One 7 (12), e53114 (2012) PUBMED 23300874 REFERENCE 2 (bases 1 to 2487) AUTHORS Komine Y, Nakamura K, Katsuki M and Yamamori T. TITLE Novel transcription factor zfh-5 is negatively regulated by its own antisense RNA in mouse brain JOURNAL Mol Cell Neurosci 31 (2), 273-283 (2006) PUBMED 16257534 REMARK GeneRIF: Results report features of zfh-5 isolated from the mouse brain; in addition to the mRNA, the antisense strand of zfh-5 is also expressed in the developing brain, in a manner complementary to the expression of zfh-5 mRNA. COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK032589.1. On Jul 3, 2012 this sequence version replaced NR_004444.1. ##Evidence-Data-START## Transcript exon combination :: AK032589.1, SRR7345562.2860410.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849381 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-2487 AK032589.1 1-2487 FEATURES Location/Qualifiers source 1..2487 /organism="Mus musculus" /mol_type="transcribed RNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="14" /map="14 28.06 cM" gene 1..2487 /gene="Zfhx2os" /gene_synonym="Zfhx2as" /note="zinc finger homeobox 2, opposite strand" /db_xref="GeneID:432855" /db_xref="MGI:MGI:3620246" ncRNA 1..2487 /ncRNA_class="antisense_RNA" /gene="Zfhx2os" /gene_synonym="Zfhx2as" /product="zinc finger homeobox 2, opposite strand" /db_xref="GeneID:432855" /db_xref="MGI:MGI:3620246" exon 1..1273 /gene="Zfhx2os" /gene_synonym="Zfhx2as" /inference="alignment:Splign:2.1.0" exon 1274..2487 /gene="Zfhx2os" /gene_synonym="Zfhx2as" /inference="alignment:Splign:2.1.0" ORIGIN
agaaatgagcggggcacttaggataagctgtgtttacctaagtggggagatgacctttgggagaaggcagggaatacaattggacttgggtacgaagtggcaggagcagagaggggacttaccagctgtggggaacttgcgggcaggcgctccaaggtggtggaaaccatttaggagtagctgggcttcaaggggcttgtctggcctcagcccgggcccaggcatgggtgtctgaggctgtcctagggcctggggcccaaagtactggaagagttcaggagggttggtgggggcagcccctggtgggggaggaggtcctggccccaccagccctggtggcaggccaagtggcagcccctggtgcaacatcaggacgttctgcatgtgtttctcagaagtcatgtggatgcgcaggtttcgggagatgttggtttcgtagctgcacactttgcactgccaggatgacttggtcttgggctctttatccccgacagaggtgggtgggagggatgcctccgggggactcgcctgcccgccaggccctgcctggaagccctgcaggttggccaggtgcttgtcggactgcatgtggatgctgaggttgcctttggtggtggtggagtagttgcagacatcgcagcggtagggcttgtagccgcagttgtagctctctccgcgggccaggcgggggtgggcgcccccggcgctacagtagctgcagtggctgttgctctcggggtgcttctcccgcatgtgcacgtccagggtctgctggtacttgtagtgccagttgcacttgggacacttgagagtcttgcaggaattgcgtgagtgtagcagggacatgtgactggacaggctgaggccctggaaggcggcaggggctggagtgtagtcatcggccaggcgacaggacggaggtgggtcactggtatcttcgggagagcctgctggagctgggagcacggccacctccttagaggtgggtgagctttggttgagcgggaggcagagccctccatcctcttcctgcccctcagggaaccagtctggccccgcctcgcctcttggtactggcgaatctttggcttgggttgggctggggtcccaggtggctagggctgtgggtggggatggtgggctgagggctataacctcttcagcggggagaacaagggcttgaccatctgcctctggggggccgtcctcagcctgggctccatttgtcttcacagtcactgtgctggtgtccggtacttcgggagaaggacgggcagccagagacggcgctgaggtatcgtgggacaacatttggtcagaagagctaaagccttggattgggtcgaagccatgttggatgtgaagggtggtaaggtgtgaggaggggaagtgggtgaggaggggcaggctgggctcttccttggcgcttgcctcatcccaggggaagccctttggtaacgagagttcactgcccctaggcaggggcaggttggccagtaggtaggcctggcctccagctgcgaagaataagtggctgctgaggtccaaaggaaggatctcttcctcctcctttgccaccccaaggtcctttggtgggatgtggccacagccaggctcttcttggggctctccaatctcctttggtgggtcaaggtcactgcctgactccagacgctctccccccggctctgaggaccttatgctctcagaggtggagggggcatcagggggatctttggtgacaggatcagaggtgctggaggaggaggtctctggaggtggtgaccgaacattgtgcccaggggaaggaacggttccggagggagaggctgagttaagggtagccatggtagacggaggactgctgagggttcatttcagcgtgacagccagtaccctgcatggaggcatggggagagcagtgccgtaagatctcggggtccccagcaaggctgaatgtctggactctttagccctactatgctcagactcaggtgcccccatgccaacttgaagctctacttagtgtgtctaaaaccagagttcacgatcgctttccaaaccagctcttctccatcttgcaatctcaaatgtggtaccactcaaccctcggcttatatgtctatgctatgccctgtagcttccattccataaccagttccaggatgcatcagaccctacactcacatcttcctcaccagcagcaccctggtcggacccactggtatctttttgagctgatgcaccagatgggatactcttttccttcccacctctgccctctccaagctgacagccaaaacaaccccttcatgttcaactacagaaaatgcccaacatgtgtagggagaacctctgtctgctgcccgctgtcagtggcaatcagcgcatgggcggtctcgtcttcgtttgtgccctcaccaaaactgctttactccccgcggtgttttaattttaggttagaattaaatataaattttaggttac
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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