2024-09-28 09:28:36, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NR_002854 2793 bp RNA linear ROD 17-OCT-2021 DEFINITION Mus musculus distal-less homeobox 1, antisense (Dlx1as), antisense RNA. ACCESSION NR_002854 VERSION NR_002854.2 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2793) AUTHORS Vanyai HK, Garnham A, May RE, McRae HM, Collin C, Wilcox S, Smyth GK, Thomas T and Voss AK. TITLE MOZ directs the distal-less homeobox gene expression program during craniofacial development JOURNAL Development 146 (14) (2019) PUBMED 31340933 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2793) AUTHORS Zhou J, Wang R, Zhang J, Zhu L, Liu W, Lu S, Chen P, Li H, Yin B, Yuan J, Qiang B, Shu P and Peng X. TITLE Conserved expression of ultra-conserved noncoding RNA in mammalian nervous system JOURNAL Biochim Biophys Acta Gene Regul Mech 1860 (12), 1159-1168 (2017) PUBMED 29055695 REFERENCE 3 (bases 1 to 2793) AUTHORS Zheng Y and Jia L. TITLE Long noncoding RNAs related to the odontogenic potential of dental mesenchymal cells in mice JOURNAL Arch Oral Biol 67, 1-8 (2016) PUBMED 26986487 REFERENCE 4 (bases 1 to 2793) AUTHORS Cajigas I, Leib DE, Cochrane J, Luo H, Swyter KR, Chen S, Clark BS, Thompson J, Yates JR 3rd, Kingston RE and Kohtz JD. TITLE Evf2 lncRNA/BRG1/DLX1 interactions reveal RNA-dependent inhibition of chromatin remodeling JOURNAL Development 142 (15), 2641-2652 (2015) PUBMED 26138476 REFERENCE 5 (bases 1 to 2793) AUTHORS Ramos AD, Diaz A, Nellore A, Delgado RN, Park KY, Gonzales-Roybal G, Oldham MC, Song JS and Lim DA. TITLE Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo JOURNAL Cell Stem Cell 12 (5), 616-628 (2013) PUBMED 23583100 REFERENCE 6 (bases 1 to 2793) AUTHORS Kraus P, Sivakamasundari V, Lim SL, Xing X, Lipovich L and Lufkin T. TITLE Making sense of Dlx1 antisense RNA JOURNAL Dev Biol 376 (2), 224-235 (2013) PUBMED 23415800 REFERENCE 7 (bases 1 to 2793) AUTHORS Jeong J, Li X, McEvilly RJ, Rosenfeld MG, Lufkin T and Rubenstein JL. TITLE Dlx genes pattern mammalian jaw primordium by regulating both lower jaw-specific and upper jaw-specific genetic programs JOURNAL Development 135 (17), 2905-2916 (2008) PUBMED 18697905 REFERENCE 8 (bases 1 to 2793) AUTHORS Liu JK, Ghattas I, Liu S, Chen S and Rubenstein JL. TITLE Dlx genes encode DNA-binding proteins that are expressed in an overlapping and sequential pattern during basal ganglia differentiation JOURNAL Dev Dyn 210 (4), 498-512 (1997) PUBMED 9415433 REFERENCE 9 (bases 1 to 2793) AUTHORS McGuinness T, Porteus MH, Smiga S, Bulfone A, Kingsley C, Qiu M, Liu JK, Long JE, Xu D and Rubenstein JL. TITLE Sequence, organization, and transcription of the Dlx-1 and Dlx-2 locus JOURNAL Genomics 35 (3), 473-485 (1996) PUBMED 8812481 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK132348.1. On Apr 25, 2009 this sequence version replaced NR_002854.1. ##Evidence-Data-START## Transcript exon combination :: HG975391.1, AK132348.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-2793 AK132348.1 2-2794 FEATURES Location/Qualifiers source 1..2793 /organism="Mus musculus" /mol_type="transcribed RNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="2" /map="2 42.58 cM" gene 1..2793 /gene="Dlx1as" /gene_synonym="Dix1as; Dlx1os" /note="distal-less homeobox 1, antisense" /db_xref="GeneID:111970" /db_xref="MGI:MGI:1195983" ncRNA 1..2793 /ncRNA_class="antisense_RNA" /gene="Dlx1as" /gene_synonym="Dix1as; Dlx1os" /product="distal-less homeobox 1, antisense" /db_xref="GeneID:111970" /db_xref="MGI:MGI:1195983" exon 1..312 /gene="Dlx1as" /gene_synonym="Dix1as; Dlx1os" /inference="alignment:Splign:2.1.0" exon 313..2793 /gene="Dlx1as" /gene_synonym="Dix1as; Dlx1os" /inference="alignment:Splign:2.1.0" ORIGIN
agctcagagatgcaaaaagcctgcggcgctctggaggcgcctggtcctggggacctctttcctccactctgttctcagcataggaagatggggctggggaattctttttggttttctggttttgttttgctctggttttggtcggggttttgtatttttctattcttccttggttttattttttcctttttttcctttttttttttcttttgctttcctgtcattctcccagccaaaagccgccttcgacccttttgatttgatgtagcaaagagtgtgtgtccagattatctgaaatagacactgaagaagctacatagatggtcaagcagggcccggaagaagaccattcaggaaaaagtggtccaggactcggtggatgggctgccggcagaccggtgtggctcagacctggtgactttttggagaggtcgtagaatgaggacagcagacacacgaggaccttgacttcggcgcacagacagtgcaaaaaggagacaaagacggacagaatcaaaaaagagcgtatttccccctcctacgtatttgtttttcctgatagtctcacaaagatgagagtctggtccggtccagcgggttatcttgtggcactggctgtctccagtggctgtgcctgcgctttgaggccactctgctgttcaccgtggcccaaaccagattcgggctgaaaggtcgctgagtcagacttttaggggctccgagaagcagcaagccctctgccttcactgttcctttttcttttatttttagctccccacccccacccctgctcccgctcgtgggctcttctcctcctggcccagggcgtgcgaaaaggtggatgaacctggaggcgggaggggccgggccaagggagacgggcaggaagcgggtgagtgcgaactgataacctcacatcagttgaggctgctgcatagcttcttggtgcgctgagggataccatgatgtatagctggggacgtaggagccagcgctgctgccggagcccttcccagatgaggagttcggattccagccgggtggtaccggtggggagccggcagacaaggctctgccgttcgccagcgcgctgccctccagagctgccccgccttgcttcatcagcttcttgaacttggagcgtttgttctggaaccatatcttgacctgcaggatcgggcgacaacgtgactggactatgaccattgagcctacccaggtccaaggagaaaagggacgggtggacaacaatacccgccctccttgctttgggaaagctgacagctccaggacagaggggcagagaccaccgcctccccacaccccatgagggccaaaggccagaaaattgagccccaggtccagccgctgttggcaacttttagagcagctatcagagccgggaataagagaacaggggagagccaggccttggcttgcaaatgagacgatgccacctgggcgacgtttatggaagacctcatgcagcacaatgcaataacaataaagaaaatttaaaacctagataggaacggggtggggggcgggggcatttgttaaaattagatctcctttcctcgtaggactattggaagaggctacagcgtctttgttaaactctttagactcaaaccaattctcccccccacccccaacggtgtatttgctttccccagctccaacctaaatctagagacagactggccctcgttcgaatgcctaggaactgcccagggtcttagagaagtgcaggaagaaaaaagaaaaatctcactttttttttcccccttcttcttaaggatctggaacttgggaagtgaagggccagagggaaggatctgcctctgccacctcgcaagaagaaggaggtgggggaagcaggcttaggcccaggacctgagtgattagtggcacactttaaaggctaaggaagattaaatcccccttctattgttccagttgttcaggcacgtgtgacctcagaacctccaaacaaaacgtctggggaaatccttccagttccctgcctggtcagaagaccaggtagcctgcaggtcagagagtagggtccgagctagggcaaacagtttgagggaggaagaggagacgctgaaagtcagaggtggatacacacacacacacacacacacacacacacacacgggttggggggcggactgtgacacctagaaccagaggcccagcgaacaaaaaatgtgaagcctggggctggagcccagctcccgaggcttgtttggcagagcggccaggtacctgcgtctgtgtgagtcccaaggaggccgccagctccgccctctcaggcagagctaagtactgagtttgttggaacctccggttcaaagcctgcaactgcaaactggaataaattgtcctgggtttacggatctttttccctttgccgttaaagcgcacctcgccgccttccaccaccgtactcttctcggagtccgcccctggagggacaacagaagcagagacccttgttaatgctgcactgcctttagtgaggagggacgagaatgaatgtctatggatgggttggcagaagtagggtccggaaaagaacgttcaagaaaccctgaaagactgcgaaggtccctcaaggtccgagcgcacgtccctggctgctgcagacagaattgggtcgttcccaagagcgcagctattgcctttgcagagaaagtttgctattttttgcaggcggtagttgaggtttaattacccttaattgcatacattgtttatagcgctacgcaataaataattaccgag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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