2024-09-28 09:27:48, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_153109 1036 bp mRNA linear ROD 04-AUG-2023 DEFINITION Mus musculus TGFB-induced factor homeobox 2-like, X-linked 1 (Tgif2lx1), mRNA. ACCESSION NM_153109 VERSION NM_153109.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1036) AUTHORS Lu Y, Oura S, Matsumura T, Oji A, Sakurai N, Fujihara Y, Shimada K, Miyata H, Tobita T, Noda T, Castaneda JM, Kiyozumi D, Zhang Q, Larasati T, Young SAM, Kodani M, Huddleston CA, Robertson MJ, Coarfa C, Isotani A, Aitken RJ, Okabe M, Matzuk MM, Garcia TX and Ikawa M. TITLE CRISPR/Cas9-mediated genome editing reveals 30 testis-enriched genes dispensable for male fertility in micedagger JOURNAL Biol Reprod 101 (2), 501-511 (2019) PUBMED 31201419 REFERENCE 2 (bases 1 to 1036) AUTHORS Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K, Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A, Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S, Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR. TITLE A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain JOURNAL Neuron 83 (2), 309-323 (2014) PUBMED 24952961 REFERENCE 3 (bases 1 to 1036) AUTHORS Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S, Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N, Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y, Okado H, Hashimoto M and Asahara H. TITLE A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58 JOURNAL Dev Cell 17 (6), 836-848 (2009) PUBMED 20059953 REFERENCE 4 (bases 1 to 1036) AUTHORS Jin L, Zhou Y, Kuang C, Lin L and Chen Y. TITLE Expression pattern of TG-interacting factor 2 during mouse development JOURNAL Gene Expr Patterns 5 (4), 457-462 (2005) PUBMED 15749073 REFERENCE 5 (bases 1 to 1036) AUTHORS Lai YL, Li H, Chiang HS and Hsieh-Li HM. TITLE Expression of a novel TGIF subclass homeobox gene, Tex1, in the spermatids of mouse testis during spermatogenesis JOURNAL Mech Dev 113 (2), 185-187 (2002) PUBMED 11960710 REMARK GeneRIF: Tex1 may play a crucial role during mouse spermatogenesis REFERENCE 6 (bases 1 to 1036) AUTHORS Nakamura K, Funakoshi H, Tokunaga F and Nakamura T. TITLE Molecular cloning of a mouse scavenger receptor with C-type lectin (SRCL)(1), a novel member of the scavenger receptor family JOURNAL Biochim Biophys Acta 1522 (1), 53-58 (2001) PUBMED 11718900 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF434662.1. ##Evidence-Data-START## Transcript is intronless :: AF434662.1 [ECO:0000345] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..1036 /organism="Mus musculus" /mol_type="mRNA" /db_xref="taxon:10090" /chromosome="X" /map="X 49.58 cM" gene 1..1036 /gene="Tgif2lx1" /gene_synonym="Tex1; Tgif2lx; Tgifx1" /note="TGFB-induced factor homeobox 2-like, X-linked 1" /db_xref="GeneID:245583" /db_xref="MGI:MGI:2387796" exon 1..1022 /gene="Tgif2lx1" /gene_synonym="Tex1; Tgif2lx; Tgifx1" /inference="alignment:Splign:2.1.0" CDS 108..803 /gene="Tgif2lx1" /gene_synonym="Tex1; Tgif2lx; Tgifx1" /note="TGIF homeobox 1; TGF beta-induced transcription factor 2-like protein; testis expressed homeobox Tex1" /codon_start=1 /product="TGFB-induced factor homeobox 2-like, X-linked 1" /protein_id="NP_694749.1" /db_xref="CCDS:CCDS30368.1" /db_xref="GeneID:245583" /db_xref="MGI:MGI:2387796" /translation="
MEEAEGSPEETQDFMKYYSSFGIRLERTCKMKFHDSRELPRGNMLPLKSVKILRDWLCEHQFNAYPTVADKRMLSKNTDLSYLQVSNWFVNIRKHLRWEIRYKPYSLSHEGQAANAAQKQHSNPSEEVKTQFNENADMQDLPLPIRQDSEEKVPYLESSPNQKVIAEDNIEKEEKISITEPWSSPEVAWPEEKPDFSSFYMLVDVAVQKAKEMEEQKKQNPNPQGPQQQFM"
misc_feature 282..389 /gene="Tgif2lx1" /gene_synonym="Tex1; Tgif2lx; Tgifx1" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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