2024-09-28 09:27:35, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_053151 1150 bp mRNA linear ROD 16-FEB-2022 DEFINITION Mus musculus killer cell lectin-like receptor subfamily A, member 21 (Klra21), mRNA. ACCESSION NM_053151 XM_003945727 XM_006536421 VERSION NM_053151.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1150) AUTHORS Rahim MM and Makrigiannis AP. TITLE Ly49 receptors: evolution, genetic diversity, and impact on immunity JOURNAL Immunol Rev 267 (1), 137-147 (2015) PUBMED 26284475 REMARK Review article REFERENCE 2 (bases 1 to 1150) AUTHORS Schenkel AR, Kingry LC and Slayden RA. TITLE The ly49 gene family. A brief guide to the nomenclature, genetics, and role in intracellular infection JOURNAL Front Immunol 4, 90 (2013) PUBMED 23596445 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 1150) AUTHORS Corbett AJ, Coudert JD, Forbes CA and Scalzo AA. TITLE Functional consequences of natural sequence variation of murine cytomegalovirus m157 for Ly49 receptor specificity and NK cell activation JOURNAL J Immunol 186 (3), 1713-1722 (2011) PUBMED 21187440 REMARK GeneRIF: A recombinant murine cytomegalovirus in which m157(K181) is replaced with m157(G1F), which interacts with both Ly49H and Ly49C, causes no apparent attenuating effect on viral clearance from natural killer (NK) cells. REFERENCE 4 (bases 1 to 1150) AUTHORS Geurs TL, Zhao YM, Hill EB and French AR. TITLE Ly49H engagement compensates for the absence of type I interferon signaling in stimulating NK cell proliferation during murine cytomegalovirus infection JOURNAL J Immunol 183 (9), 5830-5836 (2009) PUBMED 19828630 REMARK GeneRIF: Signaling through the natural killer (NK) cell activation receptor Ly49H is able to compensate for the absence of cytokine stimulation in the preferential phase of viral-induced proliferation during murine cytomegalovirus infection. REFERENCE 5 (bases 1 to 1150) AUTHORS Desrosiers MP, Kielczewska A, Loredo-Osti JC, Adam SG, Makrigiannis AP, Lemieux S, Pham T, Lodoen MB, Morgan K, Lanier LL and Vidal SM. TITLE Epistasis between mouse Klra and major histocompatibility complex class I loci is associated with a new mechanism of natural killer cell-mediated innate resistance to cytomegalovirus infection JOURNAL Nat Genet 37 (6), 593-599 (2005) PUBMED 15895081 REFERENCE 6 (bases 1 to 1150) AUTHORS Makrigiannis AP, Pau AT, Saleh A, Winkler-Pickett R, Ortaldo JR and Anderson SK. TITLE Class I MHC-binding characteristics of the 129/J Ly49 repertoire JOURNAL J Immunol 166 (8), 5034-5043 (2001) PUBMED 11290784 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF288380.1. On or before Jan 5, 2014 this sequence version replaced XM_006536421.1, XM_003945727.1. ##Evidence-Data-START## Transcript exon combination :: AF288380.1 [ECO:0000332] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..1150 /organism="Mus musculus" /mol_type="mRNA" /strain="129/J" /db_xref="taxon:10090" /chromosome="6" /map="6" gene 1..1150 /gene="Klra21" /gene_synonym="Klra-ps1; Ly49H; Ly49u" /note="killer cell lectin-like receptor subfamily A, member 21" /db_xref="GeneID:93968" /db_xref="MGI:MGI:2136938" CDS 113..913 /gene="Klra21" /gene_synonym="Klra-ps1; Ly49H; Ly49u" /codon_start=1 /product="killer cell lectin-like receptor subfamily A, member 21" /protein_id="NP_444381.1" /db_xref="GeneID:93968" /db_xref="MGI:MGI:2136938" /translation="
MSEQEVTFPTMRFHKSSGLNSQVRLEGTQRSRKAGLRVCSVPWQLIVIALGILCSLRLVIVAVFVTKIFQYSQHKQEINETLNHHHNCSNMQRDFNLKEEMLTNKSIDCRPSYELLEYIKREQDRWDSETKTVLHSTQNTGRGVKYWFCYSTKCYYFIMNKTTWSGCKANCQHYSVPIVNIEDKDELKFLQRHVITEGYWIGLSYDKKKKEWAWIDNGQSKLDMKIRKMNFKSRGCVFLSKARIEDTDCNIPYYCICGKKLDKFPD"
misc_feature 230..583 /gene="Klra21" /gene_synonym="Klra-ps1; Ly49H; Ly49u" /note="Ly49-like protein, N-terminal region; Region: Ly49; pfam08391" /db_xref="CDD:462461" misc_feature 545..889 /gene="Klra21" /gene_synonym="Klra-ps1; Ly49H; Ly49u" /note="C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs); Region: CLECT_NK_receptors_like; cd03593" /db_xref="CDD:153063" misc_feature order(704..706,785..787,839..841,845..850) /gene="Klra21" /gene_synonym="Klra-ps1; Ly49H; Ly49u" /note="ligand binding surface [chemical binding]; other site" /db_xref="CDD:153063" ORIGIN
aggggataacagaccagtaaaggcccacattaccccaattgaggcatccatcctttctacaggcatcacttcagggtggagacacagaacatacctctacttatcccataagatgagtgagcaggaggtcactttcccaactatgagattccacaagtcttcagggttgaacagccaggtgagacttgaggggactcagagatctagaaaagctggcctaagagtgtgttcagtcccttggcagctcattgtgatagcacttggaatcctctgttcccttcggctggtaattgttgcagtgtttgtgacaaagatttttcagtatagtcaacacaaacaagaaatcaatgaaactctcaaccaccaccataactgcagcaacatgcaaagggatttcaacttaaaggaagaaatgttgacaaataagtctatagattgtaggccaagctatgaacttctggaatacatcaaaagagaacaggacagatgggacagtgaaaccaagactgttttacattccacacagaacacaggcagaggtgttaaatactggttctgctatagtactaaatgttattatttcatcatgaacaaaactacatggagtggatgtaaagcgaactgccagcattacagcgttcccattgtgaacatagaagataaagatgaactgaaattccttcagcgccatgttattacagagggttactggattggattgtcttatgataagaaaaaaaaggaatgggcatggattgacaatggccaatctaaacttgacatgaaaataaggaaaatgaactttaagtctagaggatgtgtatttttatctaaagcaagaatagaagatactgactgtaatattccctactactgtatttgtgggaagaaactggataaattccctgattaactttccaaccagagttaaagaacatagtctgctgtgaagagaaacaaagctgcaagaacattgggactgtcctctcgacctatcttgacagaacagaggtcattttctatcctgttggagagaggacgcatctactcgggtgaatgtgcacgctttgccctaaagccttcagaactgtgttctttctgatttcttaaactcccataaaactgaataaagagtcccccctaaaataac
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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