2024-09-28 09:25:45, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_001284250 5098 bp mRNA linear ROD 13-JUN-2024 DEFINITION Mus musculus histone deacetylase 5 (Hdac5), transcript variant 5, mRNA. ACCESSION NM_001284250 VERSION NM_001284250.2 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 5098) AUTHORS Zhao,Y., Wang,H., Tang,Y., Wang,J., Wu,X., He,Z., He,Y. and Tang,Z. TITLE SNHG16/miR-205/HDAC5 is involved in the progression of renal fibrosis JOURNAL J Biochem Mol Toxicol 38 (1), e23617 (2024) PUBMED 38079211 REMARK GeneRIF: SNHG16/miR-205/HDAC5 is involved in the progression of renal fibrosis. REFERENCE 2 (bases 1 to 5098) AUTHORS Zhu,C., Piao,Z. and Jin,L. TITLE HDAC5 inhibition attenuates ventricular remodeling and cardiac dysfunction JOURNAL Orphanet J Rare Dis 18 (1), 266 (2023) PUBMED 37667300 REMARK GeneRIF: HDAC5 inhibition attenuates ventricular remodeling and cardiac dysfunction. Publication Status: Online-Only REFERENCE 3 (bases 1 to 5098) AUTHORS Wang,J., Wu,S., Liu,L., Pang,Y., Li,Z. and Mu,H. TITLE HDAC5-Mediated Acetylation of p100 Suppresses Its Processing JOURNAL Int Dent J 73 (3), 387-394 (2023) PUBMED 36156247 REMARK GeneRIF: HDAC5-Mediated Acetylation of p100 Suppresses Its Processing. REFERENCE 4 (bases 1 to 5098) AUTHORS Kim,S.J., Hotta-Hirashima,N., Asano,F., Kitazono,T., Iwasaki,K., Nakata,S., Komiya,H., Asama,N., Matsuoka,T., Fujiyama,T., Ikkyu,A., Kakizaki,M., Kanno,S., Choi,J., Kumar,D., Tsukamoto,T., Elhosainy,A., Mizuno,S., Miyazaki,S., Tsuneoka,Y., Sugiyama,F., Takahashi,S., Hayashi,Y., Muratani,M., Liu,Q., Miyoshi,C., Yanagisawa,M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5098) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy. REFERENCE 6 (bases 1 to 5098) AUTHORS Lemercier,C., Verdel,A., Galloo,B., Curtet,S., Brocard,M.P. and Khochbin,S. TITLE mHDA1/HDAC5 histone deacetylase interacts with and represses MEF2A transcriptional activity JOURNAL J Biol Chem 275 (20), 15594-15599 (2000) PUBMED 10748098 REFERENCE 7 (bases 1 to 5098) AUTHORS Zhou,X., Richon,V.M., Rifkind,R.A. and Marks,P.A. TITLE Identification of a transcriptional repressor related to the noncatalytic domain of histone deacetylases 4 and 5 JOURNAL Proc Natl Acad Sci U S A 97 (3), 1056-1061 (2000) PUBMED 10655483 REFERENCE 8 (bases 1 to 5098) AUTHORS Kao,H.Y., Downes,M., Ordentlich,P. and Evans,R.M. TITLE Isolation of a novel histone deacetylase reveals that class I and class II deacetylases promote SMRT-mediated repression JOURNAL Genes Dev 14 (1), 55-66 (2000) PUBMED 10640276 REFERENCE 9 (bases 1 to 5098) AUTHORS Grozinger,C.M., Hassig,C.A. and Schreiber,S.L. TITLE Three proteins define a class of human histone deacetylases related to yeast Hda1p JOURNAL Proc Natl Acad Sci U S A 96 (9), 4868-4873 (1999) PUBMED 10220385 REFERENCE 10 (bases 1 to 5098) AUTHORS Verdel,A. and Khochbin,S. TITLE Identification of a new family of higher eukaryotic histone deacetylases. Coordinate expression of differentiation-dependent chromatin modifiers JOURNAL J Biol Chem 274 (4), 2440-2445 (1999) PUBMED 9891014 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL954730.15. On Apr 21, 2022 this sequence version replaced NM_001284250.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK145972.1, ERR3363658.3911560.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375 [ECO:0006172] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-138 AL954730.15 63571-63708 c 139-360 AL954730.15 58300-58521 c 361-432 AL954730.15 51982-52053 c 433-692 AL954730.15 40473-40732 c 693-837 AL954730.15 40196-40340 c 838-952 AL954730.15 39988-40102 c 953-1083 AL954730.15 39356-39486 c 1084-1230 AL954730.15 39051-39197 c 1231-1343 AL954730.15 38850-38962 c 1344-1475 AL954730.15 38398-38529 c 1476-1698 AL954730.15 37997-38219 c 1699-1910 AL954730.15 36110-36321 c 1911-2192 AL954730.15 35619-35900 c 2193-2364 AL954730.15 34799-34970 c 2365-2498 AL954730.15 33966-34099 c 2499-2619 AL954730.15 33535-33655 c 2620-2669 AL954730.15 33202-33251 c 2670-2777 AL954730.15 32932-33039 c 2778-2833 AL954730.15 32571-32626 c 2834-2921 AL954730.15 32363-32450 c 2922-3041 AL954730.15 31232-31351 c 3042-3139 AL954730.15 30905-31002 c 3140-3258 AL954730.15 30625-30743 c 3259-3392 AL954730.15 30105-30238 c 3393-3477 AL954730.15 29804-29888 c 3478-3647 AL954730.15 29514-29683 c 3648-5098 AL954730.15 27984-29434 c FEATURES Location/Qualifiers source 1..5098 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="11" /map="11 65.82 cM" gene 1..5098 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="histone deacetylase 5" /db_xref="GeneID:15184" /db_xref="MGI:MGI:1333784" exon 1..138 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 139..360 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" misc_feature 201..203 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="upstream in-frame stop codon" CDS 339..3647 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /EC_number="3.5.1.98" /note="isoform 5 is encoded by transcript variant 5; histone deacetylase mHDA1; histone deacetylase 4" /codon_start=1 /product="histone deacetylase 5 isoform 5" /protein_id="NP_001271179.1" /db_xref="CCDS:CCDS70321.1" /db_xref="GeneID:15184" /db_xref="MGI:MGI:1333784" /translation="
MNSPNESDGMSGREPSLEILPRTPLHSIPVAVEVKPVLPGAMPSSMGGGGGGSPSPVELRGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMIPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQLGKILTKTGELSRQPTTHPEETEEELTEQQEALLGEGALTIPREGSTESESTQEDLEEEEEEEEEEEEDCIQVKDEDGESGPDEGPDLEESSAGYKKLFADAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGSMKSPTDQPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAAGLGCSLREAQTGEKEEAETVSAMALLSVGAEQAQAVATQEHSPR"
misc_feature 339..404 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 453..527 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 540..803 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9); Region: ClassIIa_HDAC_Gln-rich-N; cl25407" /db_xref="CDD:421006" misc_feature order(543..548,552..557,564..566,576..578,585..590, 597..602,606..611,618..623,627..632,639..647,651..659, 663..668,705..710,717..725) /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:197400" misc_feature order(543..548,552..557,564..566,576..578,585..587, 597..599,606..608,618..623,627..632,639..644,651..653, 663..665,705..707,717..719) /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="dimer interface A, C [polypeptide binding]; other site" /db_xref="CDD:197400" misc_feature order(576..578,588..590,600..602,609..611,621..623, 630..632,642..647,654..659,666..668) /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="dimer interface A, D [polypeptide binding]; other site" /db_xref="CDD:197400" misc_feature 897..1154 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1086..1088 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="Phosphoserine, by AMPK, CaMK1, SIK1 and PKD/PRKD1. /evidence=ECO:0000269|PubMed:17468767, ECO:0000269|PubMed:21454484; propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); phosphorylation site" misc_feature 1185..1187 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="Phosphothreonine, by PKC. /evidence=ECO:0000250|UniProtKB:Q9UQL6; propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); phosphorylation site" misc_feature 1755..1823 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1803..1805 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="Phosphoserine, by AMPK, CaMK1, SIK1 and PKD/PRKD1. /evidence=ECO:0000269|PubMed:17468767, ECO:0000269|PubMed:21454484; propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); phosphorylation site" misc_feature 1908..1910 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="N6-acetyllysine. /evidence=ECO:0000250|UniProtKB:Q9UQL6; propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); acetylation site" misc_feature 1917..2174 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 2139..2141 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q9UQL6; propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); phosphorylation site" misc_feature 2289..2291 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q9UQL6; propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); phosphorylation site" misc_feature 2349..3608 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="Histone deacetylase 5; Region: HDAC5; cd10007" /db_xref="CDD:212531" misc_feature 2364..3398 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); Region: Histone deacetylase" misc_feature order(2808..2813,2835..2840,2922..2924,2928..2930, 3204..3206,3324..3326) /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="putative active site [active]" /db_xref="CDD:212531" misc_feature 3636..3638 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q9UQL6; propagated from UniProtKB/Swiss-Prot (Q9Z2V6.2); phosphorylation site" exon 361..432 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 433..692 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 693..837 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 838..952 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 953..1083 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 1084..1230 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 1231..1343 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 1344..1475 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 1476..1698 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 1699..1910 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 1911..2192 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 2193..2364 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 2365..2498 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 2499..2619 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 2620..2669 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 2670..2777 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 2778..2833 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 2834..2921 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 2922..3041 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 3042..3139 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 3140..3258 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 3259..3392 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 3393..3477 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 3478..3647 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" exon 3648..5098 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /inference="alignment:Splign:2.1.0" regulatory 3749..3754 /regulatory_class="polyA_signal_sequence" /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="hexamer: AACAAA" polyA_site 3769 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="major polyA site" regulatory 5066..5071 /regulatory_class="polyA_signal_sequence" /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" /note="hexamer: AATAAA" polyA_site 5098 /gene="Hdac5" /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600" ORIGIN
gttgttgttggtggcggcggcgagcggagccggaggagccgccgcaaagatggaggagccgtcgaggaggcgctgccgctgctgttgccgccgctgctgccgccgccgcccgcgaagccggagctcgagccgcagcggggatgccgttctgagtgcctgactgcctcgccccgccccgaaggatggccttggatgggcattagaggcactgcggccctgggctcgggctcctgtcccgtccgtctgtctgttatcgtctgtctctcttgacatcacagcagctccgccccctcccgtcccagcccccaacgtcagcttcctgcaggcccagagccggcatgaactctcccaacgagtcggatggcatgtcaggccgggaaccatccttggaaatcctgccacggactcctctgcacagcatccctgtggcagtggaggtgaagccggtgctgccaggagccatgcccagctccatggggggtggaggtggaggtagccccagccccgtggagcttcggggggctctggcgggccccatggaccctgcgctacgggagcagcaactgcagcaggagctcctggtcctcaagcagcagcagcagctccagaagcagctcctgttcgccgagttccagaagcagcacgaccacttgacgcggcagcacgaggtccagctgcagaagcacctcaagcagcagcaggagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgggagcagcagcggcaggaggagctggagaaacagcggctggagcagcagctgctcatcctgcgcaacaaggagaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccaggaattcctgttgtccaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcaccccaaatgctggggagcccaccacgcttctttggaccagagttcccctccccagagcggccctcctgggacgcctccctcctacaaattgcctttgcttgggccctatgacagccgtgatgactttcccctccgtaaaacggcctcggaacccaacttaaaagtacgttcgaggctaaaacagaaggtagccgagaggagaagcagtcccctcctgcgtcgaaaggatggcactgttattagtacttttaagaagagagcagttgagatcaccggcacggggcctggggtgtcgtccgtgtgtaacagtgcgcccggctctggccccagctctcccaacagttcccacagcaccatcgctgagaacggctttactggctcagtccccaacatccccactgagatgatcccccagcaccgggccctccctctggacagttccccaaaccagttcagcctctatacgtctccttctctgcccaacatctccctagggctgcaggccactgtcactgtcaccaactcgcacctcaccgcctccccgaagctgtcaacacagcaggaggctgagaggcaggcccttcagtccctgcggcagggcggcacactgaccggcaagttcatgagcacatcctccatccctggctgcctgttgggagtggcactggagggtgacacaagcccccacgggcacgcttccctgctgcagcacgttttgctcctggagcaggcccggcaacagagcacgctcatagcagtgccgctccatgggcagtccccactggtgacgggtgaacgtgtggccaccagcatgaggacggtgggtaagctcccgaggcaccgacctctgagccgcactcagtcctccccgctgccgcagagtccccaggccctgcagcagctggtcatgcagcagcagcaccagcagttcctggagaagcagaagcagcagcagatgcagctgggcaagatccttaccaaaactggggagctgtcaaggcagcccaccactcacccggaggagacagaagaggagctgacggagcagcaggaggccttgctgggagagggggccctgaccattccccgggaaggctctacagaaagtgagagcacccaggaagacctagaagaggaggaggaggaggaggaggaggaagaggaggactgcattcaggtcaaggatgaggatggcgagagtggtcctgatgaaggccctgacttagaagagtccagtgctggttacaaaaagttgttcgcagatgcccagcagttacagcccctccaggtgtaccaggcacccctcagcctggccactgtgcctcatcaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagccccacagaccaacccactgtggtgaagcacctcttcaccacaggtgtggtctatgacacgttcatgctgaagcaccagtgtatgtgcggaaacacacacgtgcacccagagcacgccggccgcatccagagcatctggtcccggctgcaggaaactggtctgctcggcaagtgtgagcggatccggggtcgtaaagccacactggatgaaatccagaccgtgcactctgagtaccacaccctgctctatgggaccagcccccttaaccggcagaagctggacagcaagaagctgcttggccccatcagccagaagatgtacgccatgctgccctgtgggggcattggggtggacagtgacacggtgtggaatgagatgcactcctcaagtgccgtgcgaatggcagtgggctgcctggtggagctggccttcaaggtggctgcaggagagctcaagaatggatttgctatcatccggcccccaggacaccatgctgaggagtccacagccatgggattctgcttcttcaactccgtagccatcacagctaaactcctgcagcagaagctgagcgtgggcaaggtcctcatcgtggactgggatattcaccatggcaacggcacccagcaagcattctacaacgatccctctgtgctctacatctccctgcatcgctacgacaacgggaacttctttccaggctctggggctcctgaagaggttggtggagggccaggtgtggggtacaacgtaaatgtggcgtggacaggaggtgtggatccccccattggagatgtggaatacctgacagccttcaggacagtggtgatgcccattgcccaggagttctcacctgacgtcgtcctagtctccgctgggtttgatgctgttgaaggacatctgtctccactgggtggctattctgtcaccgccagatgttttggccacttgaccaggcagctcatgacactggctgggggccgggtggtgctggccctggagggaggccatgacttgaccgccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggagctgcagcccttggatgaagcagtcttgcagcaaaagcccagcgtcaatgcggttgccacactagagaaagtcatcgagatccagagcaaacactggagctgtgtacagaggtttgccgctggtctgggctgctcgctgcgggaggctcagacaggtgagaaagaggaggccgagactgtgagcgccatggccctgctttccgtgggggctgagcaggcccaggctgttgccactcaagagcacagccccaggtaagccagcagaggagcccatggagcaggagcctgccctgtgacaccctggcccccatccctctgggcttcatcattgtgattttgtttattttttctattaaaaacaaaaagtcacacattcaacaacgtgtgccgtgtgggtctctcagcctcgcccgcctccaagctgtttcagaaccccctcccactacaagggccctgggtcagctttcgaatccattccttctatggggcattgggtgcagtacccactttgcccatgttgtatcccatacccaattccccgtactcttctaccgtggacagtgctccaggcagtactgccaactctggagctgcctgagatgggaacagtgattggtgcctggacttcagttggcttttggggaatgccttaatttgaaatctgcccctctccaccctcaggatgatgtactaccatttaagatgcagaatcgagggaaggtaggcgtccaccccaaactttcccttcctctctatctccctcaccattctgcagactctcctctttggcctcagcactgaagactcgtgcccaggatgtaggccttagacttgtggccaggcttcttgtctcttactcctgagtatcccaggagctcaaagggtaccgggtggtgtgcagcggggttagaaggggccaggaggacctgcgtatgcaggcaggttctccactttttttctattaaactctccgtcttgtgctggaccagtataaggaggggagaaggtagaccctgcatgggggcttcaggttcatgcaagcccctctgatgttctgggccagattttctccatccatcagcctgctgcaagcagaagggtcaagatccagctcccttctggagcctttttgctttgaaacctggggatcgtgaaagacagggtagatatagttctagaatagacagggccagaaccctgtctagaagccacccctgtcccccagaggtgttgggggggggggagtccagctctcagcaggaggttgttaggagctatccatcttttccagtagccttgtgtccagaggctggagcccacagacttccagtgaatgtggtctagcctgtaggaaaccaaagatgggaaatggctcctaaggggccaatttttcttcccctataccacatccccagggctcagctatctgtttccatattgtccgtatggggcctgagcagggctgagggagctggggagtcccaccactattagttttctgtgtgtttgcgtgctgtctgtatcatccttgcactgaaccagaggctgctcacctcccactctctccccgtaggctgatcttatcctgtgccaacccactcctgctttgtctccctggacatggattttagttcagtagtttgtatcccaacacatggtttttgtcttcgtgtaaataaacttatttgtggcagtgctttctgggaa
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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