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2025-06-16 23:54:37, GGRNA : RefSeq release 229 (Mar, 2025)
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Results:
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AUTHORS Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A and Enright AJ. TITLE miRBase: microRNA sequences, targets and gene nomenclature JOURNAL Nucleic Acids Res. 34 (Database issue), D140-D144 (2006) PUBMED 16381832 caaggcctatctatctagattcttcttggcctctctgagcatgcattcctgagactccaagaagaatctagacagataggccttg
position 58
REFERENCE 1 (bases 1 to 134) AUTHORS Jorjani H, Kehr S, Jedlinski DJ, Gumienny R, Hertel J, Stadler PF, Zavolan M and Gruber AR. TITLE An updated human snoRNAome JOURNAL Nucleic Acids Res. 44 (11), 5068-5082 (2016) PUBMED 27174936 atgcatctatttgacagacctggagcagttgctatctgctgctatggtttccaccacagatgcaagaagaacatgtccttgcgctttccgtctgtctaattgtggcagctgagattgaatagaggaatacagga
position 63
tggtgctgcgctccagagaggcagaaaacgagtgggagctgaggtgtcttaaagccgttcctcagcctgggagaagatctctggcttcaggatggaggtcagggggtcgttcctggcggcctgcaggagacgcatggctacctggaggaagaatcgtgacaaggatggcttctcaaatcccgggtaccgagtccggcagaaggatctgggcatgatccacaaagctgccatcgcaggtgatgtgaacaaggtgatggagagcatcttgctcaggctgaatgacttgaacgacagggacaagaagaacaggactgctctacttttggcgtgtgcccatggccgtccaggagtggtagctgacctggtggccagaaaatgccagcttaacctcactgacagtgaaaacaggacagctctgatcaaggctgtacaatgtcaagaagaagtttgtgcatccatcctgctggaacatggcgccaacccaaatgttagagatatgtatggcaacactgctctgcactatgccattgataatgagaatatatcaatggcaagaaaactgcttgcatatggtgcagatattgaagcaagaagccagga...
position 382
GR, Caulfield M and Munroe PB. CONSRTM Wellcome Trust Case Control Consortium TITLE Genome-wide association study identifies eight loci associated with blood pressure JOURNAL Nat Genet 41 (6), 666-676 (2009) PUBMED 19430483 gtgatcaaagctggaccttttcagagaaggtctcgaatcctgaagacagacttcgaggggatgatgcagcaagaagacccacaccagatgagggcgccttgatattggatttcccagcctccagaactaagcctgggacttgcctctgtgatctggtgctttggagggccttgggcctcagggctagcaaggtccctttctggagattccagttcctctgcccgccctcctttacctctttctcctcacacatctgtctgagggatggggatgagggctgccaaccaatgttaccacttgacagaccacaagagggctggttccagtgcctcccttgttcagctgctgacactgcagcttggcagtcattgaaggc...
position 70
TITLE Genome-wide association study identifies eight loci associated with blood pressure JOURNAL Nat Genet 41 (6), 666-676 (2009) PUBMED 19430483 atgcgcagccctcgggccggcccgggcgcaccttttctgtctcctgccacattgtgagcgctccgccgcccagataaccgccggctccccgcgccgcccccgccttctcccactccgcccactgccgggagcccaggggatgatgcagcaagaagacccacaccagatgagggcgccttgatattggatttcccagcctccagaactaagcctgggacttgcctctgtgatctggtgctttggagggccttgggcctcagggctagcaaggtccctttctggagattccagttcctctgcccgccctcctttacctctttctcctcacacatctgtctgagggatggggatgagggctgccaaccaatgttaccacttgacagaccacaagagggctggttccagtgcctcccttgttcagctgctgacactgcagcttggcagtcattgaagg...
position 149
ES cell growth and differentiation JOURNAL Nat Biotechnol 22 (6), 707-716 (2004) PUBMED 15146197 ggagttaggaacagactataagaaatggttggtctggaggaaaaagggtaaaacttatgagggcccttgtgaattgatgaatatgaagacactaagaaagcagaaatagaactgagaagaatgaaataactgtctctacctttctcgaattgtctaatatggaaagaatgaaagacagctaataagcaactctctgcaagaagacatatggcttagaatctacttggagagagtcaaacacagaatccctttgaatttaatggccattccaggtgatttgaacagccaaataagaaacaggtcctcttcaatgtacaatctgccaagt
position 197
variation 397 /gene="LINC01905" /replace="a" /replace="t" /db_xref="dbSNP:922356882" variation 398 /gene="LINC01905" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:933630941" variation 406 /gene="LINC01905" /replace="a" /replace="g" /db_xref="dbSNP:141259871" ORIGIN // tgatgcagcaagaaggcccttgccagatgccagcaacttgatattgaacttctcatcctccagaatggtttgcctctctgtcatacctcaagaggaacacaaagagtgatggcctgtcactctgatgcctctctctactcaaatggcagaaaccaaccaggtgatggccacagtggcagaacctaggaagccaagaagaaaccagagaatggagacacatggcagcaatggcaagtcatcagacccaggatttcccaaagaacactggtccaggaagatgctctgtgaaaaagtgttccctggtcggagaaatttgtgaaac...
position 197
g" /db_xref="dbSNP:1717272190" variation 404 /gene="NAALADL2-AS3" /replace="a" /replace="g" /db_xref="dbSNP:2474847338" variation 405 /gene="NAALADL2-AS3" /replace="a" /replace="t" /db_xref="dbSNP:1717271665" ORIGIN // cctatgacagacaaggcaagctctactctcagaagcaaaaattatatatctaggagtcagagtatgaatcaagaagaatggacttctgcttcttatctacctaatgccagataatgatgacagcaatgcattttctacattcatatcctcaatcatatggaatgcttactggaaaaccggtttaaaagaaaggtgactagttattggtcttgctctgacagccgtggaaaccatttgctgatgaaagcacaagcaacaacaacaaaaaagatgaataaactggatttcaacaaaaacacatttgtgcttcagagaacataatcaagaaagtgaaaaggcaacccaccaatgggagaacacagtttcaaaacatatatctaa...
position 70
gaggttgcagacataaacacaggattcatcagcatatgtgtggtttctgaacctatgggacaggatggcatcactcagggaaagagcacagagtcagaagaaaatatgacccaagaccaggccttgaagaactccgatatttaatgtttgggtagaagaaaaggcaaacgaaagtatctgaaaagatgggccagagaagagagaatcaaccaaggggagatggtcccagaagtcaaacagaagggagtgattcgctgtgatgaatgctgcagaggccaaataaggaaaagaagacagcaagaagaagccactttgagcccctatgatttcatctttgatccactcatccagcactccatactccttgatccctacccaccaaattctccttaaaagccctggtctccaaatgttcaaggcgaccgatttgagtaataaaactctagtctcccattta
position 364
Jones S, Grocock RJ, van Dongen S, Bateman A and Enright AJ. TITLE miRBase: microRNA sequences, targets and gene nomenclature JOURNAL Nucleic Acids Res 34 (Database issue), D140-D144 (2006) PUBMED 16381832 tttaccttcttgtataagcactgtgctaaaattgcagacactaggaccatgtcttgggcaataatgctagcagagtacacacaagaagaaaagtaacagca
position 87
loci and evolution of casein gene family JOURNAL J Mammary Gland Biol Neoplasia 7 (3), 327-345 (2002) PUBMED 12751895 REMARK Review article attttccactgtgtagtccactggtcttctatttgggaaacaaggaccaaacaaccatgaagttcttcatctttacctgccttttggctgttgctctggcacatcatgagataaagcactcctcctcttccagtgagtaatctgccagcatctaccaagaagaaactgcaaataaaatagatacgatgcaatcttctagcagtttatccagtggggaatctgctcaagtatccactgaaaacaatgaactgactaaggaaggaaggatctacttaaagcacatggaatctaccagcatctcccaagaagaatctgctgaagtattccctgagacgaaaaccaaccagtttctccagaagttcactgtcccccagtatgtccaggctgttccccttgtagtctatgagcctgtggaatcacattcaggaaaacacctacccatatattcccatttagaaga...
position 156
PUBMED 15740594 REMARK GeneRIF: Expression of gene HSPCO16 resulted in the apoptosis of these cells, which suggested that the apoptosis of dermal papilla cells might be associated with the expression of gene HSPC016 in vitro. gtttccggtggcagggtctggggaagcggcggcaggcgccatgtccggccgcgaaggtggcaagaagaagccactgaaacagcccaagaagcaggccaaggagatggacgagataaggctttcaagcagaaacaaaaagaggagcagaagaaactcgaggagctaaaagcgaaggccgcggggaaggggcccttggccacaggtggaattaagaaatctggcaaaaagtaagctgttccttgtgcctgaggagatggtgaccctttatttcatctgtatttaaacctctctattccctgccataacatcttttgccacgtatagctggaattaagtgttgtcttggagctgttgtacatttaagaataaacttt...
position 61
cctagtgtgtctgaggaaatccaatctctcccactccagcccgcctactcattgaacatggctgctatctctgtcttctggaaacacggctccaatcctgcaacaactctatacaagagctcccagtggttcttaaccttggctgagcaacagacccatttgggaagaaaaaatctagcttatgagatacctcagatcaatcaatccctggcagtgggtctgctaaacatcagatacagacaaacaactgcatagatctccaactagattgaagaacaggaccctccagagagcttccaagaagacaccaacctaggcatgggtttatgttcctgacaaagaataaggattgttatgaagaatgttctattttgaattgtgaaaataattatttaaagctgtacaaaaaaaaaaaaaaa
position 443
tcaaaagggaaatagtactcatcgaagatgtgcctttgctaggaactaggacaagggtggcctttataaattcatgaagagaaggagccagcatatgaacttgctgcctatctttagcaaggagatgcaaatgacatccacaaacctcttctgctgtatacctggatgaaagcaaggctagctgtgtgtcctatggcaccaaggactgaaagattgtaagaagtaagagtccatcatagaggccaagccaaatacaactatgttttcaagcataagatggatagatgtggtaaaccacaagaag
position 559
ggatggcggtgacgggcgcagggagcggggcccggctctccttgcctcgaggctcctctgattccactcgcgtggctgcgcggccctggcagcggccttcgtcccgggggtgggagctacacagggttccgccccgtcctggcgaggacgcctgagggggctctgtggtaaggctctgtcgggcaggccgggcttccgggaggacctggtctggatcggtcaccgctgggtgcctgagctccgcatggagcctgcagcctttgtttaacttataaagaaatgggggctccgagcagtcaagaagaacatgccccaagttattcgtcagtgaggcggaaattgtggtgtacttgttccagaccaactatgaagataggatgcccatccagaagaacgggaagcattttcttcctcacctttggaaagtaaaacaaaaaaaaaaagaaaaa
position 418
ggcagatggcatcggggacacagggaaacctgaccttagaggaaatggaaaagttggagagacactgagcactgatacgaaataattctcttgctgaaatacacgaaaggagtcccagcagccatattagtatttccacgtcctgtgtcagccccaagtagagagaacttggaatgggaggggaaatggcagccatcaggaaatgaaatgctggcccagagaattctaagcaagtcaatcaccagtccaaaggaaaggccatgtgaggacataaggaggagacagccatctataagccaagaagaaagccctcactagaaaccaactctaatggcaccctgatcttggatttctagcccctggacaatgagaaaataaatgtctgttgtttaaaaaaa
position 471
B, Zhang J, Hao C, Tian X, Li W, Xu N, Lu Y and Liu S. TITLE MFAP3L activation promotes colorectal cancer cell invasion and metastasis JOURNAL Biochim Biophys Acta 1842 (9), 1423-1432 (2014) PUBMED 24735981 actgtgaggcctctcacggtgggacccaggctttgggtagctggctccatgctctagcaaagcctcacttagcagtggggaggtcccaagaagagaagcgagatacccatataaagcaagcctgcttagccttccagggtccttcaaatcttaccaaatgaaagccagcttgctccacctactgtcaagccagcatctcattctccccattcttgtctcttaaacaactactcaaaaaaggagagccatgaaagtcaccagcctagaaaattacagtcgacttcatgagcttcatttggatttctcatcatgcaatagcaaagtcacagttattcctactgagatcacaatgatgctgccagagcctcccctgagcttgagagccctcctctt...
position 476
MA. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 ataattgctgccaaaatcatcacaagctgtacgtcatcaaggctccctttgcactcccaagaagaactgttcattttaaacaaaagtgatgagaattcctccagaggtgggaacagagaaaacttcatgcttggtaaagcacctgaggcacccattacaatctgggacaagatgaggacatcaacactcatgctgtattccacatgggaggccaagtcaacgcaagatgaaagagatataagagccaggcgcggtagctgacacctgtaatcccagcactttgggaagctgaggtgggaggctcacttgaggccaggagatcaagaccagcctaaccaacaaagcaagaccaagaccccttctcta...
position 58
ctcgtgcaaagcagccctgaaagctcaggcttgaagacaaaatgtggagcccaggctccttcgattgaaaacctctctacgaggacactctccgcagtgggcggccagaaaggatttcggatcaagatccgcagagtggtctgatgccaacaggcagtcctgccagcagtgacctgcaactccactggatgtggcaggcaggatctgtttccctggccacggagaaggtccagctgagaggctcagacagccataatggatgggatcagaggtaccgagaatgccatggtttcaacccaagaagacagcagggccattagcagaagtgagacaaggagctggctggaaagtgaacatcacaggcagaaggaagaggcgtggcaggtgccccaagtg
position 455
human genes JOURNAL Genome Res. 16 (1), 55-65 (2006) PUBMED 16344560 gttggcctctgacccctcctcccgctgatgccaatgacaggaaaccagagactctctgcctcagagactacagggagagagggaggatgggcccaaggtgtattcctcttacgatgcccacccttaactcaccgtgcattgcctgagggccctgggctctcagtctgcattgattggagctgggaccgaagcccccattccagaaaccggaccaggagataggcaaacaagaagaagccacccaatgtgagaaagaaataagcaacgggggtgatgtccgtctttatgcccagcaaagccagccccagtaggaaggaggcgcagcacaggaggagaagcggcttctccagtctccccagttcttcaatctcaaataaatcatctgtagagtcccctccagttccgaaattctctctatgtcttggagtgtgtggaatagccaggaaaccagcccaggagctttgactcccagccattctgcaccttaagcaaaaaggaagttagccacacatggtggctcatgactgtagt...
position 228
agcttagaagagattgagagcattgaccaggaaataaagatcctgagagaaagagactcttcaagagaggcatcaacttctaattcatctcgccaggagaggcctccagtgaaacccttcattctcactcggaacatggcccaagtcaaagtatttggagctggttatccaagtctggcaactatgacggtgagtgactggtataagcaacattggaaatatggagcattaccagatcagggaatagccaaggcaacaccagaggaattcagaaaagcagctcagcaacaggaaggtcaagaagaaaaggaggaagaggatgatgaacaaacactctacagagttcgggagtgggatgactggaagggcatccatcctagggactatggcagccaacagagcatgggctgatcttcccacaaatgagaggactgaagggtgcacacctcccacgccaaggaaaaccatgcagtcctcatctccctgggcttccgcttcagctgtgtacaacgaaggcaaagatgctaaatcttgctttgctttcaataaagtgtccagtgattaaaaaaaat
position 301
tctgaaatgagagaaattgcagaaattctccctgctcaggaaaaggtagaggcaaggattgacttaaagatgggtaagaagcgtgttactgatcataagctaaatgtggacaaagtaattaaaaatattaacacaatttcttcggagttgaagaagataaaagatttgcatcacatgctgatgcttacagcagccacagctaaggggactgggactgccaagaccagtttggaccactcagaacttactacaggagctggggaaaggaacacctcaaacaaaatcaagctgtgactccaagaagaagagggcatggccgttcgttaggcaccaaataagctctcccagttattgctttgtgaccttatcctacattttaatcatcccatcaagactgagaacttagcagaagcagaaagaaacaaccccctctttgaagagtctaaaatatcagatgtatcccttgtttctaacagctatctgatttcttatttgttatgagtttctgttttattgttgaactaacaaatatttgggagagttgagtttactaatttgtatatatataatttaaaacaaaataaaaataatgtaaacaag...
position 336
gene="LINC02462" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1727308483" variation 639 /gene="LINC02462" /replace="c" /replace="t" /db_xref="dbSNP:1288517234" variation 640 /gene="LINC02462" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:116434665" ORIGIN // gggaaacaagaagaatcctagatgtctcaatgagatgaagaattgcctactgtttatcaccctgacccagtctttctccccaagacaagttctggaaactaaaagtccatgatcaaggcatcagcagatcaacgtctggtaagagtcagcttcctgatgagcagatgcctccctgacttaatctcacttgttggagagcaagaaaagaggatgttttcctgtcacttcctataagggtgctaatcacagtcatgtgagctccactcttatgacctaattatctcccaaaggctccatctcctaatatcatcatattgaagaa...
position 7
type 1 patients JOURNAL Genes Chromosomes Cancer 35 (2), 113-120 (2002) PUBMED 12203774 ttccatccggctatgacttccgcaagacaatccacttctttgcatttctgtctatctccctgaaagaagacattggtgattccccaggtctcctacaactctgaaattttgattccaggcaatccatggggcagacatccttatttgacagatagagaagatgtcatggccctgtaagtcaagagaacaggatggccaaaggcaagaagaaaaagacactggaaggggcccctttctccttcagagagcctcgttcttacacaagggccaagaaacaggacatctaaggacttggaagccccaggcacgtgacccccggcctctctgttctccagctaaggaacgctttatggccttcgcatttattcatgtatttcctggacctactttgtactaggccaagggaagtgagctgaataagacccagcggggttgagagacataaaaatggcttattgaaattcaatactccaagggctggaagagatggatgagtagcgagccggaggagc...
position 208
variation 652 /gene="BTBD9-AS1" /replace="a" /replace="t" /db_xref="dbSNP:923393222" ORIGIN // cctgcctccacactaccccctctcccctaatgaggctggcagcaccatttgctagcacctggcagatgagagagaaagaaaacctggtgtggagacccccatccattaaaggcaagagagtgaaaagtgggagagaaagctcccaagttcaacagcagtgacctagggtcatgcagtgaggacttacaaagtccaagaagaaagcatttggagaagtgctacacatgctcaactgaacttcctgtcaaattgttctcactcgtttgggcacaagtctgcttaagccatctctcattaacatttactcttgcccgaagccctctacgcccccaacccctgctaatcttccacaagcaagctgatcacactgggatctccttttcccagacacgtttgattctcactttctcctgaacctagaaatgtgcttcccaccaaagcatgccaggcactaactcgtccctactgaaaggggctgttaaaagctcatcttctttccagatgg...
position 194
aatggagtgagagagatcaatgctggacccaagatgattaacgtgccaacctggggcactggcgctagggagatggtcagatcgatggattccaagcaaatgaagagcctggcgcattcggcagccaagctgtgaagttaaacacagcgacggggccaggcgtttggtgagcgatgagggtgatgaaacaggacacatatatcttgggaaacaacactgagaggccagatctggttctgaaaaatgtctttgctccttgtcacctttcaaaggcaaaatcacagctctgacaaataccaagaagaattcccaggtgtgtctgcagccgtgaaaatgtgacatgagtcacagtgtcttcggaggaaatgaaagaccacaggacggggacatggcatcatgaaaaaagatgctttgtgattttcaacatatggtgacacttttcctaatttagagggggaagctgggttttgagttttcttttatcctccctctttgttaaaagcaagagaaagaagatttaaagaacatctgtgtattcaaatgatagaaatagaattatacactttcaaaaacaa
position 401
AUTHORS Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A and Enright AJ. TITLE miRBase: microRNA sequences, targets and gene nomenclature JOURNAL Nucleic Acids Res 34 (Database issue), D140-D144 (2006) PUBMED 16381832 tttctcctcgctgcccgcacatcctgctccacagggcagagggaggccaagaagacctctgcactgtgagttggctggctggaggaa
position 48
agcagcaggcagacatctgaaccgtggtacatctagttcttctatttgtctacctataggtgcactcataacattttaatttatttcatgtgttgtcatcgttatcctctgtattactctgagaaagaagatgttacctgtttgtgaaaaagagggtcacagagtatgtgtgaaccaatacttcatttgagacagcctcacatggagaatgcaatgagccattctcttctcacatacagttgaatatgacatttactgcagtttgatcactaagcataagagccaagaactctggaacaagaagaagaagacgaaggaggaggaggagggggagggggaggaggagaaggagaaggaggagaaggagaaggagaaggagacggagaaggaggaagaggaggaggagggccgggcgcagtggctcacgcctgtaatcccagcattttgggaggccgaggcgggcggatcacgaggtcaagagaccgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcatggtggcgggcgtctgtagtcccagctactcgggaggctgaggcaggagaa...
position 509
atacagtgtttctgcctatttgattaacgatgactatgaaagcacaaatttgggggcctgcaatgtatacagccatattggaaaaaattggactcgattcttactgaaataaccagtgttgggctgtgaaggtactgtgggaaatgctttggaaggtgcctttaaaagaatctcaaaatattgctttcctttccttgagcgagaccgaaaaactttagaaaaagaaaagctcatacctagaacaaaggaccacgctgaatgcatattctagagcacatttcacatccctcgcgtcaacaagaagaagaagaggagctttgatgcatttcagtctacaagttgacatcacaaaagtgctggaagcagccgtggtttcggaagggagctagaggcagaacgagtgtggatgctgagagatccctgactgtgactgctacatatttcagctgcgtagtcacatatatacaagattccctgcacttacaaccaaaatgataacaaatgctctcatttgggattttgtttgatagtcattaggatattttataagtctttccaagcacaaggcaaagagaaatgtgacaaataaggcaacatatt...
position 612
KS, Noh SM, Kim S, Yoo HS, Kim YS and Kim NS. TITLE Transcriptome analysis of human gastric cancer JOURNAL Mamm Genome 16 (12), 942-954 (2005) PUBMED 16341674 ggactgcgccgaacgccagcagcagggtcagaagggaggtagtcgccctccgtcgtggcctggcgtggattccgagcgttggtgtctggcggtttccgaccgttggtgtctggcacgcgccaccccgatgtaccagacaagaagacaagaaaatgatttgaggacagcttcaatcgcggtgtgaagaagaaagcaacaaaacgaccactgaaaacaatgccggtggcaaaacatccaaagaaagggtcccaagtggtacatcgtcatagctggaaacagtcagagccaccagccaatgatcttttcaatgctgcgaaagctgccaaaagtgacatgcaggatttctgacaggactctgggcccctccccagctccactccctacctcaagaatgtgaccatttggaaaaggcaaagagaaaaggagcaaaatgaagcattc...
position 144
cgcaccccaggaattcagcttcctctcaaaagccatggttgcgaggtcgcgtgtttaacctcgcactggctgctgagggaattaacaggcctgcgcagcagcttcgttagcttcgaaagaaaatgggccccggctcccgcaggaggcccgcctggcgcgcagatgtcgttattagaatccgggacgtcggtggaccctctgggtctggctccctcggggcttacgatgaaaaaaactggggggcgcgtgtgtgtgtcatgagacttccatttctgaaggggtcctgttccatatcctcaagaagggagtgctgcacagagaggccatgaggaatctaagcagacaggccttgctgggtttccccactcagtctgttaatattagatcataccgtccagtcacaacatggttgtcaattatgcctgtccagtaaagtctccataaaaggcccaagaagacagagttggagttcctggatagctgaacatgtggaggttcctggagggtggggcacctgggcataaaagctctgagccccttccctcataccttgctctgtgcatccctccatctgtatcctttgtaacattccttataata...
position 561
ttggaaaaacagaagcaacgcagaggagatgggagtgaaccaagaacatagtaaccaccctgaacctcctcaacaaaccccagagggacatgtccccagaggagatgcagaagcacggggaggagggtccactctgtgctccgcagtcagtcaagaacaacactgaagtgctcaccaactactgacaacaacaagctgctgggctgcgaaggccttgagtagacactgcaacatggtgctggagaatgtgaaggagatgtgtactgaggtccccaaggggggcaacggtggcaagggcaagaagaagtccaagccagccaacaaagaccacttcatctccaagctcttcctgtgcagggactcagtcatcaccaacaagtgggggccacctccccattgacagaactcactccctcatcctatgaagacctaccctttgttatggggataataaagccctgtgcctagtagtaaaaacaaaacataacaacaacaataaaactttagtcatttggtcatattagggaagtcatttattattctgtttcttcagaaataaaaaacagataacaaaaaaaaaaaaaaaaa
position 476
db_xref="GeneID:123706536" /db_xref="HGNC:HGNC:40563" ORIGIN // ctggatgctctggttttctcccacccctcaaagaggtgcatgttcagttcaccggcatgtctacatggtcctggtgtgagtgtggggtgtgtgtgagtgtgccctgcgatgtgacagtgtcctgttcagggctggttcttactttaagccctgagctgctggaatgagctacagcaaccggagactggagactccggcaacctagagaactgttattattgacgtcagcccaagaagaatgcaatgtccaggaagctaccaaaggaataaaactacatgagcacatacttctcttccaattcaagagtggcccgccttatcccttcacaggctgacttcccatcttactgtggcagcctctgctgctgttacctgcttgaggctttcttattgtgggcctcccactcgtgtttccgattgaggaagccttccatctgggccgaaggtgtctcctgggttctggctgggacagcggagaggccattcagctaactccgtgagccatgggggtgaccacatacgctctacctgactcg...
position 231
the phosphorylation of a subunit of NF-kappaB (P65) gggctccaagcagctgcgactagcggaaagcgcgcgccagctgcacgcagggaaacagttctcattttgtgtgctcggctgactgcacgtccagcctcgggccagctcgagacggccacattgcctggttgaagatggctgagcgtaaaacagaatgcaagtcagctggagcacgtactactggaggcagagccccatgagaaggggccaagaacccgcacccatcaaaatcaagaagaaaggctgaacccggagagaaaagggagcaactgatgttgccatgcagatcccttggttgctatgagatggtaacatcactctgccccaccattggccagtgcctcctcagctgcggtgcctcccaggctgtgtggttctcacgcgggccactgacacagagctgttactatggtgaactttacaatttcctttgattggtggatttcagaaataggccatcagcggaattcattatattcagctaacctggctcagcttctcagcttctcaggtggattggtgagtcctggccaattacgcttcagctc...
position 232
Splign:2.1.0" exon 83..330 /gene="LOC101927823" /inference="alignment:Splign:2.1.0" regulatory 308..313 /regulatory_class="polyA_signal_sequence" /gene="LOC101927823" /note="hexamer: ATTAAA" polyA_site 330 /gene="LOC101927823" /note="major polyA site" ORIGIN // agacatcagaaatgtggttttgaatcacaagaagaaatcaagactaatagtggaaaagcctgaaatgtcttgcatagagctggactgtttgcagctcaggatgtttgccatcacaacggcagagccgcagttcacacccaggcacgttctccccaagacctgtggctgcaaccactgctatgcatggaatgtgagacggacggtgctcgcctagccaacagttgatgctgaatacatcttcatctgtgtattgaccatctacccttttcccatgatttgtttgtcaaaattccttgctaatttccttattaaaaatggtcagtattttaa
position 28
gcaaacgagtatatgacacatctgaatttgactgtggaactctgtatctatatacacttgcaattcttatcaagtaaaaatacatcaaagatatcaacaaccacagacgtatacacccgacaagaaccgctgtatattctagtacatcatttattggaccaacaaatacatggcatctggcaaggaattgaaaagtggcttgtctatctggaatacagggaggaaggagttgaaatgagatgggaagagtcatctgtatgcagaggaggtataaagtcatgcaaatggataagatttcaagaagaaagaagaaaaaggtaggctctgagtttggagagttgaatgagcctacagagataatgaagttgttgctggagagcctccataacttctgttgagaaatcggccttaatcttattgatgatgactttcacatgatcctcagatatctgcctctagatcccagatgagcaccagttgcagcagtcaaacgtcatctatctgtatatcaagataaattatgaaaggattatataccaactgtctaaatgacaaagagaagaaaggt
position 530
attcagaagactgaagcccaggcttactgtctacctttcacggaggcctagccgtgagaggacagaagaaggcatgtggcgaatcatgacagcagacaaagacaaagagaaggaccgggactgagactgggactgagagagagagaaaagagacaaagcaagagagagtgagaattcaaggccacgccggagctgtaccttggaaggaggagccaaaaattatgctgagagtgatcacagtgaagacgaggacaatgacaacaatagtgccaccacagaggagtccacgaagaagaacaagaagaaaccaccgaagaaaacgtctcgttatgaaaggacagataccggcgagataacatcctacatcactgaagatgatgttgtctacagaccaggagactgtgtgtatatcgagagttggaggccaaacacactgtatttcatctgtagcattcaagacttcaaactggtaagcatttt
position 622
Online-Only REFERENCE 4 (bases 1 to 177) AUTHORS Kiss AM, Jady BE, Bertrand E and Kiss T. TITLE Human box H/ACA pseudouridylation guide RNA machinery JOURNAL Mol Cell Biol 24 (13), 5797-5807 (2004) PUBMED 15199136 ccttcttgtataagcactgtgctaaaattgcagacactaggaccatgtcttgggcaataatgctagcagagtacacacaagaagaaaagtaacagcactagattgtaaagactggggtggacctctttcttaatgtccaatgtcctttgtcttaagatttggtgcaatatct
position 83
major polyA site" ORIGIN // agtcacacaagattgtcatgcgagctgaagggggctgaaattattccctctgaagaagaagaagaagaagaaaacatactgcagctcccgatttgaaacatcatatttgaaaacaaggtggggccttcatcatatgcaaccttcatattttagggcctgcctctttctattccttgacataaaccggactcttcatgctaatcaggctggaagtgtatcataaggatgctgaagctaaaaacaatgtccaaggccaaataactgacaagaagaaggccaaggcatctagaaaccatgtcttctgattcacagttgatcatactatcacctttgataaggcataaaatattattttgatgagtaaataaaaagactttggacacctgc
position 266
tgcccaaggtctcaccaggcaagagaagggcggagaagggcggcttcttcatggattgtaaatccccaaagcgtgcaaacatctgcccccatctccctggaggtggcctgttctccacgccaccctcacaggctgcctggcggactctcctcacagcactgtgcttcccggggcccacttgtacaggccccatgcgagaaggacctcgggcagtgtataatcctccaagggcccacaggaacagcagtgacaactgtgttatgaagcacctactatgtgctggggacaagaatggaacaagaagacatgctttgccctcacccctggagggcagcttccagccagggaggcaaatacctcctccccagactccttccacagatccccaaactctgcctctctccttcagatccctgctcagatgtcaccagctctgtgcagcctccctgccaccaagtctaaaattgccatagtcccctcagttcctcacccctctccctgctttctttgtctgtctcatccatgaggatgtgccctctgggaagggcaggcaggagctggctattctgttccttgccctgtccccagcaccgaggacag...
position 480
S. TITLE Kir2.2v: a possible negative regulator of the inwardly rectifying K+ channel Kir2.2 JOURNAL FEBS Lett 386 (2-3), 211-214 (1996) PUBMED 8647284 atgaccgcagccagccgggccaacccctacagcatcgtgtcatcggaggaggacgggctgcacctggtcaccatgtcgggcgccaatggcttcggcaacggcaagttgcacacgcggcgcaggtgccacaaccgcttcgtcaagaagaatggccagtgcaacattgagttcgccaacatggacgagaagtcacagcgctacctggctgacatattcaccacctgtgtggacatccgctggcggtacatgctgctcatcttctcactggccttccttgcctcctggctgctgtttggtgtcatcttctgggtcattgcggtggcacatggtgacctggagccggctgagggccgcggccgcacaccctgtgtgatgcaggtgcacggcttcatggcggccttcctcttctccatcaagacgcagaccaccatcagctacgggctgcgct...
position 141
ctgggggacccaaacgctgtgctcgccgggcacatggagcgacagcctagaccgagctgccgcttcgatcactgccccctgcacccgccgtggccatcccggagccccggtggaagcaacgccgcggaaacatcatatttgaaaacaaggtggggccttcatcatatgcaaccttcatattttagggcctgcctctttctattccttgacataaaccggactcttcatgctaatcaggctggaagtgtatcataaggatgctgaagctaaaaacaatgtccaaggccaaataactgacaagaagaaggccaaggcatctagaaaccatgtcttctgattcacagttgatcatactatcacctttgataaggcataaaatattattttgatgagtaaataaaaagactttggacacctgc
position 313
caggcccagaaactgcggaactcggccaagggaaaggtgcccaagtcggcactggacggggtttcaccatgttggccacgctgatctcgaactcctgacctcaggtgacctgcctgcctcggcctcccaaagtgctgagattacagacgagtaccggaagcgagagtgtcgagaccacctcagagtaaacctgaagtttctgaccaggacgagaagcaccgtggctgagtctgtgagccagcagattttgcgccagaaccggggccgcaaggcctgtgaccggcctgtggccaagaccaagaagaagaaggctgagggcaccgtgttcaccgaggaagacttccagaagttccagcaggaatacttcggcagctaggctccctggagggcacggtgaagaggccttcaagccctgcagcctccgactcctgctggctccaggaaccggccgtgccgcgcggccagcagatggcgatgcaggaccagcctggctcgaggaagccgcggagctgagccgagtggaggctggaatggagctggtgggccggaagtcctggggaggatttacacacagaccggagctggcttccgcaggcctgg...
position 434
cctagccttagctaggctaagagcctagcttctggcctggcttttacgtggtcagcggatgtgcgtccatccccctgcactggttccccttgtcctttctgtggctctcctggattcctctcgttcagctccttggtgtacagagcctatgtcaatggcaatggtgagggaaattgccagagccctgccctccaggcctgtccttattcatggggatctgagaagaagagattaggacccagacatgcacagaggagaccctgtaaggacacaaagagaagacagccatctgcaagccaagaagaaaggccttgggggaaaccagccctgcccacaccttggtctggacttccagctgattcttggatgagctggtccttaggcacggaggcaggactgtgagaaaataaatttctgaattca
position 828
LOC100507464" /replace="a" /replace="g" /db_xref="dbSNP:1309090139" variation 266 /gene="LOC100507464" /replace="g" /replace="t" /db_xref="dbSNP:1806350489" variation 267 /gene="LOC100507464" /replace="a" /replace="g" /db_xref="dbSNP:1806350471" ORIGIN // gagatcaaggaagaggaacacgataaaatgcttatggctccaagaagaaatagggtgagagataggaccacaaattgtttactcatttcaaccagtaaacatgtcctgcaatgtcaatctgtctttctgccacagcagttctgcgcctcctgagttgtttccatctccctccagtcattcaggaccaccaatgagatttgtgatatttggaaaactgccacccagtgcctccttttcctaatctgctgaataaagttaataagactaaaaa
position 41
variation 274 /gene="LOC102725254" /replace="a" /replace="t" /db_xref="dbSNP:1223163393" variation 276 /gene="LOC102725254" /replace="c" /replace="t" /db_xref="dbSNP:946833043" ORIGIN // ggtcaagagagcctcccctccccaccattcccagaaaaggaggaaggggctgatggactctctgggaaccccctcccctccctgcgccccgtcatcaagaagaaaattcgaagaaaaggtttagcagggacagagaagcgacctgtcccggaaaccccttaaagcctgcgggtaacatgtttgctccctcctcccccactcggactatagaagtatcaccaatccactgcagagaaattgggaaaattcagaaaaacaaaaaataaaaagaaatccac
position 96
gagctccatgcaaaacttaaacacttgcaggatgacaataatctgttaaaacagcaacttaaagatttccagaatcaccttaaccatgtggttgatggtttggttcgtccagaagaagtggcagctcgtgtggatgagctaagaagaaaactgaaattaggaactggggaaatgaacatccatagtccttcagatgtcttagggaaaagtcttgctgatttacagaaacaattcagtgaaattcttgcacgctccaagtgggaaagagatgaagcacaagttagagagagaaaactccaagaagaaatggctctgcagcaagagaaactggcaactggacaagaagagttcaggcaggcctgtgagagagccctggaagcaagaatgaattttgataagaggcaacatgaagcaagaatccagcaaatggagaatgaaattcactatttgcaagaaaatctaaaaagtatggaggaaatccaaggccttacagatctccaacttcaggaagctgatgaagagaaggagagaattctggcccaactccgagagttagagaaaaagaagaaacttgaagatgccaaatctcaggagcaaggg...
position 1137
attttaataacaaatgagaatatgatgtgacatccgttccaaatcctgtcgttccaagtaacttcttaagcatctttcacgatacagcctctgcttgaaaggaattaaaacaggtacaagcatggaaggagacgttgctatcatatttcaagaataagaaaatgctgttttgtgtggttgtgcagcaggcaatgaaatgagcttacattcaagcttccgtgttttactgaaacaacagtcacagatgcagtagatgttaaaggttgaaagacgagtgcagtaaaagcattatgaggacaagaagaaaacgtaaatatttgtgttgtttcattctttgttgtggtggcagaaacagccccctctttctaaggtaactccaatataatgatctctcccagctttgaaatactccatgtctgtttcattttccagaaatatggaaaaatgaatatataataaaaaaccctatttctcatttaaaaaaaaaaaa
position 815
ggacagtctttaggccatgttggaactacatttggaaaggtggttgttaaacatttcccagcacacacctggatctgcatctgctgtgtcaattgaaccactcactggttctgtgacctcagttcttcgtagactctggaatggagctggaagctgtcatcctcagcacactaacgcaggaacagaaaaccaagcactgcatgttcccacttataagtgagagctgaacgagcagaacacatggacatatgaaggggaacaacacactctggggcctgtgaggtgcagggagagcatcaagaagaacagctaatgggtgctgggcttaatacctgggtgatgggttgatctgtgcggcaaaccaccatggcacacatttacctatgtaacaaaccttgacatcctgcacatgtaccccggaacttaaaaataaaagttgacaaaaagaaaa
position 376
tgccccgccgccccgcctgggatgtgaggagcgcctctacccggccgcgaccccgtctgggaggtgaggagcgtctctgcccggccgccccgtctgagaagtgaggagaccctccgcctcgcagccgccccgtctgaaaaggtggctgtcaatagattggcccaaaaggaagaacaaggaaaagggcaccaaagaagataaatgaaaatacaagggtataagctgaactgtggacatcctgccactgggaattaagttaaagtagaaaaaagcagaatgtaatggggagtcccctcacaagaagaatttggatcaaagcatggcagtgaggggaagcattgagcagtgccgatttcaaatgaagactgacttgatcctgaacataacctacaagaagaaagggaccacaggctatacacaaagcatggtgccggcatctgcttctggtgagggcctcaggaagcttacaatcatcttggaaggtgaagaggaagccagcgcatcacatggcaagagagggagcaagagagaaggggacagtgccgcacactttaaaaaaaaaccttatctcacgaggcagaactaactgagtgagagttc...
position 341
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下記より最大10000件まで検索結果を取得できます。
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0.000 | 0.000 | search_start;
1.140 | 1.140 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:caagaag)?source=Homo sapiens (human)?to=0&format=json
2.223 | 1.083 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:caagaag)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
2.229 | 0.005 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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