LOCUS       NR_190203               1132 bp    RNA     linear   PRI 04-NOV-2024
DEFINITION  Homo sapiens long intergenic non-protein coding RNA 237
            (LINC00237), transcript variant 1, long non-coding RNA.
ACCESSION   NR_190203
VERSION     NR_190203.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Vu,P.Y., Toutain,J., Cappellen,D., Delrue,M.A., Daoud,H., El
            Moneim,A.A., Barat,P., Montaubin,O., Bonnet,F., Dai,Z.Q.,
            Philippe,C., Tran,C.T., Rooryck,C., Arveiler,B., Saura,R.,
            Briault,S., Lacombe,D. and Taine,L.
  TITLE     A homozygous balanced reciprocal translocation suggests LINC00237
            as a candidate gene for MOMO (macrosomia, obesity, macrocephaly,
            and ocular abnormalities) syndrome
  JOURNAL   Am J Med Genet A 158A (11), 2849-2856 (2012)
   PUBMED   23034868
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL121759.25.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189658.36119.1,
                                           SRR5189664.68397.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2145893, SAMEA2154665
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000420705.3
            RefSeq Select criteria :: based on manual assertion, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-88                AL121759.25        80223-80310         c
            89-1132             AL121759.25        66761-67804         c
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="20"
                     /map="20p11.23"
     gene            1..1132
                     /gene="LINC00237"
                     /gene_synonym="NCRNA00237"
                     /note="long intergenic non-protein coding RNA 237"
                     /db_xref="GeneID:105372556"
                     /db_xref="HGNC:HGNC:38166"
                     /db_xref="MIM:614992"
     ncRNA           1..1132
                     /ncRNA_class="lncRNA"
                     /gene="LINC00237"
                     /gene_synonym="NCRNA00237"
                     /product="long intergenic non-protein coding RNA 237,
                     transcript variant 1"
                     /db_xref="GeneID:105372556"
                     /db_xref="HGNC:HGNC:38166"
                     /db_xref="MIM:614992"
     exon            1..88
                     /gene="LINC00237"
                     /gene_synonym="NCRNA00237"
                     /inference="alignment:Splign:2.1.0"
     exon            89..1132
                     /gene="LINC00237"
                     /gene_synonym="NCRNA00237"
                     /inference="alignment:Splign:2.1.0"
     regulatory      648..653
                     /regulatory_class="polyA_signal_sequence"
                     /gene="LINC00237"
                     /gene_synonym="NCRNA00237"
                     /note="hexamer: ATTAAA"
     polyA_site      681
                     /gene="LINC00237"
                     /gene_synonym="NCRNA00237"
     regulatory      1112..1117
                     /regulatory_class="polyA_signal_sequence"
                     /gene="LINC00237"
                     /gene_synonym="NCRNA00237"
                     /note="hexamer: AATAAA"
     polyA_site      1132
                     /gene="LINC00237"
                     /gene_synonym="NCRNA00237"
                     /note="major polyA site"
ORIGIN      

aaccggactgggctgcgcgcggagccccctcttcccgtgcacagtgcggggcgaggcttggcgagcggtgggtctgcgccttcccaagaagagactggggcagcatgaatgtgctggaagattagaggctgctgatgctgaaggaaggagaaacgaggaggaagtgtccctgtggacaagtcatctcccttcatttaagccaggccagtagtccgggagacattctgaatgatgcattatcctaggcaccagaaagtatctaacattctcatggacagcagggaaaaatgagcacatgagacaggggaagattccagcacctgtgaacatgtttgtgcaggtttccagtcagtacatggatatccctcaagcctttgaatccagtctcctgtgttgtgattggaccgtttgtcattaggtttccagtggcagagtaatgctgtgggagaactggctacgatggccgcaggaggtgaattaagtattgttgtgtttttagtagaaccactaaaggaagatctgcaggcaagttggatgagtataagagccaaagattgacaagacttcctcagatgctcctactgaccagtgggggcacttctacagctccccgaatatgttctccctgcaacccccaccactttttaattaaatggccagaactgcctttttgtatcaaaacttattttagtctatcaatcaaaggcttctatagcccacctcatggcaaaggatatcagagaggtaaaagataattgttttgacatatttattatcacaactagcgactctttctgcattcacattggctggtatgcagaaaagggtgctttacaggattcttggaaatgtgtagtggatgctggctctaggggaggcagaatagagtgtgggttctgccatgggtcacatccgggttttaattctgcctctgccacatgaccttgagcacactggaaaaccctattagatgtgcaagaaggcttccccatctgtaaaggtgggtgacttagcaactttagcaatgcttaagtcacccggttgttgtgagtaatacataagttaatgtatgctaactttctagaaagtttcctggcacaaagttgtatttaataaatgatttttaaaacaa

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