ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2025-09-16 19:39:01, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS NR_110916 437 bp RNA linear PRI 19-APR-2022
DEFINITION Homo sapiens long intergenic non-protein coding RNA 1571
(LINC01571), long non-coding RNA.
ACCESSION NR_110916
VERSION NR_110916.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AC109600.2.
Sequence Note: The RefSeq transcript was derived from the reference
genome assembly. The genomic coordinates were determined from
alignments.
##Evidence-Data-START##
Transcript exon combination :: AI050873.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA2144120, SAMEA2145240
[ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-57 AC109600.2 86867-86923
58-166 AC109600.2 95912-96020
167-437 AC109600.2 96724-96994
FEATURES Location/Qualifiers
source 1..437
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="16"
/map="16q12.1"
gene 1..437
/gene="LINC01571"
/note="long intergenic non-protein coding RNA 1571"
/db_xref="GeneID:101927364"
/db_xref="HGNC:HGNC:51384"
ncRNA 1..437
/ncRNA_class="lncRNA"
/gene="LINC01571"
/product="long intergenic non-protein coding RNA 1571"
/db_xref="GeneID:101927364"
/db_xref="HGNC:HGNC:51384"
exon 1..57
/gene="LINC01571"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:1363805991"
variation 3
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:2506516095"
variation 6
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:2506516098"
variation 7
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1163076881"
variation 12
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903110642"
variation 14
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903110678"
variation 16..19
/gene="LINC01571"
/replace="cccc"
/replace="ccccc"
/db_xref="dbSNP:1903110749"
variation 16
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1398634601"
variation 17
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:992722985"
variation 24
/gene="LINC01571"
/replace=""
/replace="g"
/db_xref="dbSNP:1903110854"
variation 24
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:776178676"
variation 26
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:2142540453"
variation 30
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903110888"
variation 35
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:2506516130"
variation 36
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1175248651"
variation 39
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:1903110972"
variation 43
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1469461585"
variation 50
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:2291403"
variation 53
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1201144428"
variation 57
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:951117790"
exon 58..166
/gene="LINC01571"
/inference="alignment:Splign:2.1.0"
variation 58
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:913140903"
variation 60
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1487721490"
variation 62
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:546797677"
variation 68
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903254910"
variation 76
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:142559204"
variation 77
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903255001"
variation 79..82
/gene="LINC01571"
/replace="aaa"
/replace="aaaa"
/db_xref="dbSNP:1423203273"
variation 81
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:186279995"
variation 83
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:931816443"
variation 86
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1054136107"
variation 89
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903255199"
variation 91
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903255230"
variation 96
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903255263"
variation 97
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:375924226"
variation 100..102
/gene="LINC01571"
/replace="t"
/replace="tgt"
/db_xref="dbSNP:1903255334"
variation 102
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1011931362"
variation 104
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903255412"
variation 106
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1044726812"
variation 108
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1426205151"
variation 109
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1567305672"
variation 111
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:1903255552"
variation 113
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1165080938"
variation 114
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903255614"
variation 117
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:1903255646"
variation 120
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1049127934"
variation 125..130
/gene="LINC01571"
/replace="aaaaaa"
/replace="aaaaaaa"
/db_xref="dbSNP:1308390916"
variation 127
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903255756"
variation 129
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:1567305678"
variation 131
/gene="LINC01571"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:866099182"
variation 132
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1903255858"
variation 138
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1004821493"
variation 139
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1903255915"
variation 142
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1003330696"
variation 147
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:2142549158"
variation 148
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1596887162"
variation 149
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903256031"
variation 151
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:1903256069"
variation 155
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:563236375"
variation 156
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:3816811"
variation 158
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1903256250"
variation 161
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1903256271"
variation 166
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:2142549183"
exon 167..437
/gene="LINC01571"
/inference="alignment:Splign:2.1.0"
variation 171
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1391435738"
variation 175
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1596887530"
variation 177
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:2506530006"
variation 180
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903264775"
variation 185
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1036710949"
variation 186
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:1903264842"
variation 190
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1903264869"
variation 193
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:1903264900"
variation 196
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:966210280"
variation 205
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1457034154"
variation 207
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:918963772"
variation 208
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1178423830"
variation 210
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1596887541"
variation 213
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1596887544"
variation 219
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1431693371"
variation 220
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:775034380"
variation 221
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:551836023"
variation 224
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903265217"
variation 226
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:578022842"
variation 227
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1187151735"
variation 229
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:2142549923"
variation 230
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1029047377"
variation 232
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1246099519"
variation 236..237
/gene="LINC01571"
/replace=""
/replace="aa"
/db_xref="dbSNP:1411745917"
variation 237
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1208042795"
variation 240
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1461549260"
variation 241..245
/gene="LINC01571"
/replace="aaaaa"
/replace="aaaaaa"
/replace="aaaaaaa"
/db_xref="dbSNP:1903265463"
variation 245
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:953091164"
variation 246..247
/gene="LINC01571"
/replace=""
/replace="c"
/replace="ca"
/db_xref="dbSNP:1555474247"
variation 246
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:199767712"
variation 247..256
/gene="LINC01571"
/replace="aaaaaaaaa"
/replace="aaaaaaaaaa"
/replace="aaaaaaaaaaa"
/replace="aaaaaaaaaaaa"
/replace="aaaaaaaaaaaaa"
/replace="aaaaaaaaaaaaaaaaaa"
/db_xref="dbSNP:rs113385711"
variation 250
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1903265772"
variation 256..257
/gene="LINC01571"
/replace=""
/replace="aat"
/db_xref="dbSNP:879609973"
variation 256
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:1903265796"
variation 257
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1596887578"
variation 259
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:1903265880"
variation 260
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1308644098"
variation 261
/gene="LINC01571"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:2306768"
variation 263
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1596887588"
variation 270
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1596887590"
variation 272..273
/gene="LINC01571"
/replace=""
/replace="t"
/db_xref="dbSNP:1464901195"
variation 274
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:909138775"
variation 275
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1903266175"
variation 278
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1171462729"
variation 279
/gene="LINC01571"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:961844341"
variation 280
/gene="LINC01571"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:763796768"
variation 281
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903266276"
variation 283
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:1903266306"
variation 285
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:2142550009"
variation 287
/gene="LINC01571"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:530785026"
variation 289
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903266344"
variation 294
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903266377"
variation 295
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1040494388"
variation 306
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:1903266432"
variation 307
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1258233594"
variation 314
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1179873861"
variation 319
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:191527651"
variation 320
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:999079623"
variation 323
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903266640"
variation 324
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903266676"
variation 326..334
/gene="LINC01571"
/replace="atcctaaga"
/replace="atcctaagatcctaaga"
/db_xref="dbSNP:1032329316"
variation 326
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:2506530249"
variation 329
/gene="LINC01571"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:893162303"
variation 332
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:567580256"
variation 333
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1228250170"
variation 336
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903266854"
variation 340
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1341998577"
variation 343
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1322826896"
variation 345
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:2142550060"
variation 356
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903266945"
variation 359
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903266982"
variation 360
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1215880868"
variation 361..364
/gene="LINC01571"
/replace="cccc"
/replace="ccccc"
/db_xref="dbSNP:1903267052"
variation 362
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1903267103"
variation 363
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903267133"
variation 365..393
/gene="LINC01571"
/replace=""
/replace="aaatgggatctctttccaggtctttttgt"
/db_xref="dbSNP:2506530317"
variation 365..367
/gene="LINC01571"
/replace="aaa"
/replace="aaaa"
/db_xref="dbSNP:1567305829"
variation 366
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:2142550081"
variation 368
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:2506530323"
variation 371
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:1903267208"
variation 372
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:2506530329"
variation 374
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1045175168"
variation 376
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1378918172"
variation 382
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:865868413"
variation 383
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1903267365"
variation 390
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:926579794"
variation 391
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1903267448"
variation 399
/gene="LINC01571"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1011981644"
variation 400..403
/gene="LINC01571"
/replace="tttt"
/replace="tttttttttttttt"
/db_xref="dbSNP:1368729268"
variation 401
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:1903267576"
variation 403
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1023069894"
variation 405
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:772248932"
variation 406
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1370117337"
variation 413
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1596887664"
variation 420
/gene="LINC01571"
/replace="g"
/replace="t"
/db_xref="dbSNP:2142550127"
variation 425
/gene="LINC01571"
/replace="a"
/replace="t"
/db_xref="dbSNP:1202549906"
variation 429
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:1903267810"
variation 430
/gene="LINC01571"
/replace="c"
/replace="g"
/db_xref="dbSNP:756985288"
variation 432
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:530410947"
variation 433
/gene="LINC01571"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:970108166"
variation 434
/gene="LINC01571"
/replace="c"
/replace="t"
/db_xref="dbSNP:547026914"
variation 436
/gene="LINC01571"
/replace="a"
/replace="g"
/db_xref="dbSNP:1903268040"
variation 437
/gene="LINC01571"
/replace="a"
/replace="c"
/db_xref="dbSNP:1183845944"
ORIGIN
tatctctggaacagtccccaaacgtcttgccaagggcacaggttttcagctttaaaggccatttcaatttaagaaaacaaaagatgatcctgtgaacactgtatcaggcatcattactggactgaaaaaaggatcacttgatggacatgcctggcgttttgtttagaagtatttcttctctggccttagaagattagttttcaaagcgatggtaaaatcattgatgtatgtcttttcaagaaaaagaaaaaaaaaagactcctaaatgccaaacatttgctctttggagcatagcaagaagaaagggagaggaccagacggccacatcctaagaacagagtattgtccaggtagctgtcgccccaaatgggatctctttccaggtctttttgttaaagcttttctttcctaaataaaacttaattttctctcgctaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]