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Previous release (v1)
2024-11-01 10:24:26, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS NM_001001346 1209 bp mRNA linear PRI 04-JUN-2024 DEFINITION Homo sapiens claudin 20 (CLDN20), mRNA. ACCESSION NM_001001346 VERSION NM_001001346.3 KEYWORDS RefSeq; MANE Select. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1209) AUTHORS Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W., Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B., Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A., Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A., Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C., Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M., Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G., Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S., Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A., Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S., Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N., Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A., Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M., Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J., Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P., Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J., Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A. TITLE A reference map of the human binary protein interactome JOURNAL Nature 580 (7803), 402-408 (2020) PUBMED 32296183 REFERENCE 2 (bases 1 to 1209) AUTHORS Berndt,P., Winkler,L., Cording,J., Breitkreuz-Korff,O., Rex,A., Dithmer,S., Rausch,V., Blasig,R., Richter,M., Sporbert,A., Wolburg,H., Blasig,I.E. and Haseloff,R.F. TITLE Tight junction proteins at the blood-brain barrier: far more than claudin-5 JOURNAL Cell Mol Life Sci 76 (10), 1987-2002 (2019) PUBMED 30734065 REFERENCE 3 (bases 1 to 1209) AUTHORS Lal-Nag,M. and Morin,P.J. TITLE The claudins JOURNAL Genome Biol 10 (8), 235 (2009) PUBMED 19706201 REMARK Review article REFERENCE 4 (bases 1 to 1209) AUTHORS Angelow,S., Ahlstrom,R. and Yu,A.S. TITLE Biology of claudins JOURNAL Am J Physiol Renal Physiol 295 (4), F867-F876 (2008) PUBMED 18480174 REMARK Review article REFERENCE 5 (bases 1 to 1209) AUTHORS Krause,G., Winkler,L., Mueller,S.L., Haseloff,R.F., Piontek,J. and Blasig,I.E. TITLE Structure and function of claudins JOURNAL Biochim Biophys Acta 1778 (3), 631-645 (2008) PUBMED 18036336 REMARK Review article REFERENCE 6 (bases 1 to 1209) AUTHORS Tsukita,S. and Furuse,M. TITLE Claudin-based barrier in simple and stratified cellular sheets JOURNAL Curr Opin Cell Biol 14 (5), 531-536 (2002) PUBMED 12231346 REMARK Review article REFERENCE 7 (bases 1 to 1209) AUTHORS Tsukita,S., Furuse,M. and Itoh,M. TITLE Multifunctional strands in tight junctions JOURNAL Nat Rev Mol Cell Biol 2 (4), 285-293 (2001) PUBMED 11283726 REMARK Review article REFERENCE 8 (bases 1 to 1209) AUTHORS Heiskala,M., Peterson,P.A. and Yang,Y. TITLE The roles of claudin superfamily proteins in paracellular transport JOURNAL Traffic 2 (2), 93-98 (2001) PUBMED 11247307 REMARK Review article REFERENCE 9 (bases 1 to 1209) AUTHORS Kniesel,U. and Wolburg,H. TITLE Tight junctions of the blood-brain barrier JOURNAL Cell Mol Neurobiol 20 (1), 57-76 (2000) PUBMED 10690502 REMARK Review article REFERENCE 10 (bases 1 to 1209) AUTHORS Berg,M., Geisel,A. and Necheles,H. TITLE The influence of carbenoxolone on steroid-induced ulcer and mucus secretion in the rat JOURNAL Am J Dig Dis 20 (2), 134-137 (1975) PUBMED 1124737 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BC020838.1 and AL139101.13. On Jun 5, 2010 this sequence version replaced NM_001001346.2. Summary: This gene encodes a member of the claudin family. Claudins are integral membrane proteins and components of tight junction strands. Tight junction strands serve as a physical barrier to prevent solutes and water from passing freely through the paracellular space between epithelial or endothelial cell sheets, and also play critical roles in maintaining cell polarity and signal transductions. [provided by RefSeq, Jun 2010]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: HM005642.1, BC020838.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA2146982 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000367165.3/ ENSP00000356133.3 RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1206 BC020838.1 2-1207 1207-1209 AL139101.13 20674-20676 FEATURES Location/Qualifiers source 1..1209 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="6" /map="6q25.3" gene 1..1209 /gene="CLDN20" /note="claudin 20" /db_xref="GeneID:49861" /db_xref="HGNC:HGNC:2042" exon 1..276 /gene="CLDN20" /inference="alignment:Splign:2.1.0" variation 2 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:377429705" variation 3 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1329561439" variation 4 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784511363" variation 5 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1014203743" variation 7 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1290016350" variation 8 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:11966646" variation 10 /gene="CLDN20" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:887350517" variation 12 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1784512280" variation 14 /gene="CLDN20" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1018083624" variation 15 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:750008364" variation 20 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1324780373" variation 23 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:566610455" variation 24 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:762693370" variation 34 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1297451261" variation 38 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1362991602" variation 43 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784513328" variation 48 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:996558111" variation 50 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784513560" variation 52 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784513691" variation 53 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1028000705" variation 55 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784513919" variation 56 /gene="CLDN20" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1784514019" variation 63 /gene="CLDN20" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:765752745" variation 64 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:2114674908" variation 70 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1469006268" variation 74 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1363738218" variation 75 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:751087842" variation 79..84 /gene="CLDN20" /replace="cac" /replace="caccac" /db_xref="dbSNP:1455622530" variation 79 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1227541061" variation 84 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:568527580" variation 86..87 /gene="CLDN20" /replace="" /replace="g" /db_xref="dbSNP:1784515085" variation 87 /gene="CLDN20" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:9397236" variation 88 /gene="CLDN20" /replace="a" /replace="t" /db_xref="dbSNP:1784515488" variation 89 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1784515606" variation 92 /gene="CLDN20" /replace="a" /replace="t" /db_xref="dbSNP:2114675018" variation 94 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:577091909" variation 95 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784515883" variation 98 /gene="CLDN20" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:544359726" variation 99 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:925099147" variation 101 /gene="CLDN20" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:936089844" variation 105 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1055842626" variation 110 /gene="CLDN20" /replace="" /replace="c" /db_xref="dbSNP:1784516561" variation 113 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1275357174" variation 115 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1485989743" variation 116 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:2114675116" variation 117 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784516799" variation 128 /gene="CLDN20" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1784516915" variation 132 /gene="CLDN20" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:2985700" variation 133 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1784517298" variation 134 /gene="CLDN20" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1784517420" variation 135 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784517586" variation 136 /gene="CLDN20" /replace="g" /replace="t" /db_xref="dbSNP:1583311913" variation 141 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1435305754" variation 144 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1390404086" variation 145 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784517940" variation 146 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784518064" variation 150 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:2114675236" variation 152 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:115669602" variation 153 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784518312" variation 154 /gene="CLDN20" /replace="g" /replace="t" /db_xref="dbSNP:1784518425" variation 155 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1045697539" variation 159 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784518671" variation 163 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:541411564" variation 164 /gene="CLDN20" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:560847017" variation 165 /gene="CLDN20" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:572367547" variation 167 /gene="CLDN20" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1387168269" variation 169 /gene="CLDN20" /replace="g" /replace="t" /db_xref="dbSNP:1784519365" variation 170 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1562388072" variation 171 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1004446018" variation 173 /gene="CLDN20" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1784519708" variation 177 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1193099329" variation 179 /gene="CLDN20" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:9480098" variation 182 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:1244054304" variation 183 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:748984485" variation 184 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:1191375565" variation 187 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:894851568" variation 190 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1279117767" variation 198 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1784520820" variation 200 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:946521156" variation 201 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1345675189" variation 202 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1043370435" variation 206 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:902211481" variation 209 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:999049657" variation 217 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784521525" variation 218 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:540144336" variation 219 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:1784521785" variation 220 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:1268019072" variation 222 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1784522036" variation 228 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1031855292" variation 231 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1784522272" variation 235 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:553691183" variation 236 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:997014454" variation 240 /gene="CLDN20" /replace="g" /replace="t" /db_xref="dbSNP:1784522622" variation 246 /gene="CLDN20" /replace="a" /replace="t" /db_xref="dbSNP:1313890020" variation 251 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:192967460" variation 255 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:890726623" variation 257 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1434315191" variation 258 /gene="CLDN20" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1430472074" variation 260 /gene="CLDN20" /replace="g" /replace="t" /db_xref="dbSNP:1009441604" variation 263 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1784523565" variation 272 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1381242453" variation 273 /gene="CLDN20" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1017780522" variation 274 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1784524020" variation 275 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1237791612" exon 277..1209 /gene="CLDN20" /inference="alignment:Splign:2.1.0" variation 282 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1011356953" variation 283 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1785153426" variation 286 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1020053465" variation 295 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1751671651" variation 297 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1179218092" variation 298 /gene="CLDN20" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1785154052" variation 299 /gene="CLDN20" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:988396592" variation 300 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1161133517" variation 303 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1210845215" variation 308..316 /gene="CLDN20" /replace="ataga" /replace="atagataga" /db_xref="dbSNP:1490970133" variation 308 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1290191429" variation 311 /gene="CLDN20" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:768846591" variation 313 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:947295449" variation 314..332 /gene="CLDN20" /replace="agaattctgacagccatca" /replace="agaattctgacagccatcaagaattctgacagccatca" /db_xref="dbSNP:1785155796" variation 315 /gene="CLDN20" /replace="g" /replace="t" /db_xref="dbSNP:1785155988" variation 320 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1354502416" variation 324 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:1043351414" variation 328 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1785156383" variation 331 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:1340810036" variation 332 /gene="CLDN20" /replace="a" /replace="t" /db_xref="dbSNP:375801323" variation 333 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:955673645" variation 334 /gene="CLDN20" /replace="a" /replace="t" /db_xref="dbSNP:1785156939" variation 343 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1355634111" variation 344..348 /gene="CLDN20" /replace="" /replace="cagga" /db_xref="dbSNP:1583329936" variation 344 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1335401128" variation 346 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:937153854" variation 347 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:371022261" variation 349..352 /gene="CLDN20" /replace="ttt" /replace="tttt" /db_xref="dbSNP:1268803800" misc_feature 354..356 /gene="CLDN20" /note="upstream in-frame stop codon" variation 354 /gene="CLDN20" /replace="t" /replace="tt" /db_xref="dbSNP:751001684" variation 355 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:2114712286" variation 356 /gene="CLDN20" /replace="a" /replace="c" /db_xref="dbSNP:1207027059" variation 362 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1783062003" variation 364 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:370497394" variation 366 /gene="CLDN20" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1424748573" variation 368 /gene="CLDN20" /replace="g" /replace="t" /db_xref="dbSNP:1785158469" variation 369 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1785158600" variation 370 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1785158731" variation 373 /gene="CLDN20" /replace="c" /replace="g" /db_xref="dbSNP:1190133666" variation 374 /gene="CLDN20" /replace="c" /replace="t" /db_xref="dbSNP:1302436337" variation 378 /gene="CLDN20" /replace="a" /replace="g" /db_xref="dbSNP:1785159127" variation 379 /gene="CLDN20" /replace="a" /replace="t" /db_xref="dbSNP:199579197" CDS 381..1040 /gene="CLDN20" /note="testis secretory sperm-binding protein Li 229n" /codon_start=1 /product="claudin-20 precursor" /protein_id="NP_001001346.1" /db_xref="CCDS:CCDS5249.1" /db_xref="GeneID:49861" /db_xref="HGNC:HGNC:2042" /translation="
MASAGLQLLAFILALSGVSGVLTATLLPNWKVNVDVDSNIITAIVQLHGLWMDCTWYSTGMFSCALKHSILSLPIHVQAARATMVLACVLSALGICTSTVGMKCTRLGGDRETKSHASFAGGVCFMSAGISSLISTVWYTKEIIANFLDLTVPESNKHEPGGAIYIGFISAMLLFISGMIFCTSCIKRNPEARLDPPTQQPISNTQLENNSTHNLKDYV"
sig_peptide 381..449
/gene="CLDN20"
/inference="COORDINATES: ab initio prediction:SignalP:6.0"
misc_feature 393..923
/gene="CLDN20"
/note="PMP-22/EMP/MP20/Claudin family; Region:
PMP22_Claudin; cl21598"
/db_xref="CDD:473919"
misc_feature 402..464
/gene="CLDN20"
/note="propagated from UniProtKB/Swiss-Prot (P56880.1);
transmembrane region"
misc_feature 624..686
/gene="CLDN20"
/note="propagated from UniProtKB/Swiss-Prot (P56880.1);
transmembrane region"
misc_feature 735..797
/gene="CLDN20"
/note="propagated from UniProtKB/Swiss-Prot (P56880.1);
transmembrane region"
misc_feature 861..923
/gene="CLDN20"
/note="propagated from UniProtKB/Swiss-Prot (P56880.1);
transmembrane region"
misc_feature 957..1037
/gene="CLDN20"
/note="propagated from UniProtKB/Swiss-Prot (P56880.1);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
variation 381
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1475133416"
variation 382
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:201732989"
variation 383
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:755586771"
variation 385
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:780005334"
variation 386
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1785160520"
variation 388
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:753853336"
variation 389
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1469274860"
variation 390
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1785161192"
variation 391
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:112008767"
variation 395
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785161663"
variation 399
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1395013710"
variation 401
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1013612888"
variation 402
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1200614114"
variation 404
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785162201"
variation 405
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1397554127"
variation 410..412
/gene="CLDN20"
/replace="tt"
/replace="ttt"
/db_xref="dbSNP:756850846"
variation 410
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:748024383"
variation 413
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:367601594"
variation 415
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:777860875"
variation 417
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1442975238"
variation 424
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:201230000"
variation 428
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:927718"
variation 429
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1583330188"
variation 430
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:776821487"
variation 431
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:918692213"
variation 434
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:746339039"
variation 436
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:191128847"
variation 437
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:775815257"
variation 442
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:763318129"
variation 444
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:767133673"
variation 445
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:772774877"
variation 447
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:760186333"
variation 448
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1275635551"
variation 450
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:765787914"
variation 451
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:886427143"
variation 452
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785165579"
variation 454
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:370423337"
variation 456..462
/gene="CLDN20"
/replace="ctgctgc"
/replace="ctgctgctgc"
/db_xref="dbSNP:780653509"
variation 460
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:754963081"
variation 461
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:951355804"
variation 464
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:765325126"
variation 465
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1410263708"
variation 466
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1309762212"
variation 468..490
/gene="CLDN20"
/replace="tgga"
/replace="tggaaggtgaatgtggatgtgga"
/db_xref="dbSNP:1315551528"
variation 469
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:752484817"
variation 471
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785167152"
variation 476
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1399594028"
variation 478
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1402348316"
variation 479
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785167670"
variation 481
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785167813"
variation 482
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1409139252"
variation 484
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785168082"
variation 486
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:758157483"
variation 487
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1312870282"
variation 488
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1785168462"
variation 490
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1583330406"
variation 493
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1235641400"
variation 495
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:142319064"
variation 498
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1016926973"
variation 500
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1785171652"
variation 501
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:747175815"
variation 502
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1478410305"
variation 504..505
/gene="CLDN20"
/replace=""
/replace="aaccc"
/db_xref="dbSNP:372660394"
variation 504
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:781123929"
variation 505
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:746003126"
variation 506
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:770224950"
variation 510
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1267394344"
variation 511
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1434443549"
variation 512
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1785172929"
variation 515
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:775982881"
variation 517
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:375461196"
variation 518
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785173385"
variation 520
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785173553"
variation 522
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785173701"
variation 524
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:372008756"
variation 525
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:201768355"
variation 531
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:766123364"
variation 532
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:116971953"
variation 535
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:988448746"
variation 541
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1274163588"
variation 542
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:201831727"
variation 543
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1338684970"
variation 544
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:372413050"
variation 545
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:758409790"
variation 551
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785175455"
variation 553
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:968769494"
variation 554
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1194533417"
variation 555
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:978739766"
variation 558
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1430016724"
variation 559
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785176168"
variation 560
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1370611748"
variation 563
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1229414941"
variation 564
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785176632"
variation 567
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:763765716"
variation 571
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1562398530"
variation 573
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785177084"
variation 576
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:751433414"
variation 577
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1204405963"
variation 579..581
/gene="CLDN20"
/replace="aa"
/replace="aaa"
/db_xref="dbSNP:750105081"
variation 583
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785177704"
variation 584
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:757404666"
variation 586
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1189019584"
variation 587
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:781402574"
variation 590
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:745879488"
variation 594..601
/gene="CLDN20"
/replace="tccc"
/replace="tccctccc"
/db_xref="dbSNP:756507945"
variation 595
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:139854187"
variation 598
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:780493282"
variation 600
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1388046032"
variation 602
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:927192156"
variation 604
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:749739921"
variation 605
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:769249949"
variation 608
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:375435637"
variation 609
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1404944202"
variation 610
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:748605256"
variation 619
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:141689255"
variation 620
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:776429433"
variation 622
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785180363"
variation 623
/gene="CLDN20"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1436022745"
variation 624
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:759066859"
variation 626
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785180853"
variation 627
/gene="CLDN20"
/replace=""
/replace="a"
/db_xref="dbSNP:1785181148"
variation 628
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:918021096"
variation 630
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785181499"
variation 631
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:769405928"
variation 633
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:949478596"
variation 634
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1214413050"
variation 637
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:144781507"
variation 638
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1323959659"
variation 639
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1475407447"
variation 640
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:201661997"
variation 641..646
/gene="CLDN20"
/replace="gtgt"
/replace="gtgtgt"
/db_xref="dbSNP:1785183852"
variation 641
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:114329733"
variation 650
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:142924023"
variation 654
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:761670159"
variation 660
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:112181141"
variation 661
/gene="CLDN20"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:34434986"
variation 663
/gene="CLDN20"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:756380740"
variation 665
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1182297596"
variation 666
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:780081259"
variation 667
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:754016769"
variation 669
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785185651"
variation 670
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:755428509"
variation 674
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1555774"
variation 676
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1457883243"
variation 681
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1322796618"
variation 684
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:2114713618"
variation 686
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:748397730"
variation 688
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1785186662"
variation 690
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1430284828"
variation 696
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:772585439"
variation 697
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:778327378"
variation 701
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1231955742"
variation 702
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:745482653"
variation 705
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:769633418"
variation 706
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:774848872"
variation 710
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1562398751"
variation 711
/gene="CLDN20"
/replace=""
/replace="a"
/db_xref="dbSNP:780591787"
variation 715
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785188116"
variation 718
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785188256"
variation 720
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1785188388"
variation 722
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:150441263"
variation 723
/gene="CLDN20"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:768410059"
variation 724
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785188979"
variation 727
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1210398622"
variation 728
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:141640357"
variation 729
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:761468264"
variation 730
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:767279681"
variation 732
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:116763699"
variation 733..734
/gene="CLDN20"
/replace="cc"
/replace="ccc"
/db_xref="dbSNP:35655837"
variation 733
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:760882647"
variation 736
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785190604"
variation 738
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:563075886"
variation 741
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785191064"
variation 742
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:199712922"
variation 744
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1405903394"
variation 745
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:755092601"
variation 751
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1785191984"
variation 757
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:779250552"
variation 758
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1785192275"
variation 762
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1361230191"
variation 766
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1409825805"
variation 768
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1009963769"
variation 773
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:753223589"
variation 774
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:759011604"
variation 775
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:2114714011"
variation 776
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1351717209"
variation 782
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1412224094"
variation 784
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:778274068"
variation 785
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:760016942"
variation 786
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:145250061"
variation 787
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1166072126"
variation 790
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:768024842"
variation 795
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1280363567"
variation 798
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1442827154"
variation 802
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1345455798"
variation 803
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1209982912"
variation 805
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1025672333"
variation 806
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1177985615"
variation 808
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1225700322"
variation 809
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:148869864"
variation 811
/gene="CLDN20"
/replace=""
/replace="t"
/db_xref="dbSNP:749723059"
variation 811
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:748704642"
variation 812
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:768237797"
variation 813
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:773784666"
variation 815
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:143560527"
variation 817
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785197493"
variation 819
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1427595601"
variation 820
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:772064438"
variation 821
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1785198171"
variation 830
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1173330809"
variation 833
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785198622"
variation 834
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:374979138"
variation 835
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1485405144"
variation 836
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:760480130"
variation 837
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:200032175"
variation 840
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1785199843"
variation 841
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1243732424"
variation 842
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1334626617"
variation 847
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1436649813"
variation 848
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1425265333"
variation 849
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1276247557"
variation 852
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:776946724"
variation 853
/gene="CLDN20"
/replace="a"
/replace="aaaaa"
/db_xref="dbSNP:1225053921"
variation 853
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1296769237"
variation 854..855
/gene="CLDN20"
/replace=""
/replace="ata"
/db_xref="dbSNP:1785201761"
variation 854
/gene="CLDN20"
/replace=""
/replace="t"
/db_xref="dbSNP:769015156"
variation 855
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1441960805"
variation 856
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1366626862"
variation 857..859
/gene="CLDN20"
/replace=""
/replace="acc"
/db_xref="dbSNP:1785202358"
variation 858..859
/gene="CLDN20"
/replace="cc"
/replace="ccc"
/db_xref="dbSNP:1305484362"
variation 858
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1423362056"
variation 859
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1364979419"
variation 860
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785203229"
variation 861
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:759722908"
variation 862
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1344084387"
variation 868
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1193974897"
variation 871
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:765326646"
variation 872
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1785204340"
variation 874
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:752783633"
variation 875
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:758956503"
variation 876
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785205000"
variation 877
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:148057067"
variation 878
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:200362086"
variation 879
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:757725806"
variation 884
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1391123602"
variation 886
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:755131027"
variation 888
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1785206270"
variation 895
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:748950610"
variation 896
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:754628350"
variation 897
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1270858957"
variation 898..904
/gene="CLDN20"
/replace="tgtt"
/replace="tgttgtt"
/db_xref="dbSNP:1396503332"
variation 899
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1406469573"
variation 903
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1220136445"
variation 905
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1583331675"
variation 906
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:778482058"
variation 907
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785207590"
variation 909
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1785207715"
variation 910
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1260733312"
variation 911
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1785208053"
variation 914
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1391679184"
variation 916
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:747714294"
variation 926
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:199823828"
variation 927
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1583331724"
variation 930
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1297933768"
variation 931
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1367069746"
variation 933
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:773141580"
variation 934
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:142691738"
variation 935
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785209493"
variation 936
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:372674683"
variation 937
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1219515280"
variation 938
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785209973"
variation 943
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:770785587"
variation 945..953
/gene="CLDN20"
/replace="a"
/replace="aatccagaa"
/db_xref="dbSNP:1275071998"
variation 947
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:533884629"
variation 948
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:546881153"
variation 949
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785211392"
variation 950
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1248930658"
variation 953
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1449094719"
variation 955
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:879100708"
variation 957
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785212229"
variation 958
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785212440"
variation 962
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:138139364"
variation 963
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:538851441"
variation 964
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1583331841"
variation 965
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1583331850"
variation 967
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785213507"
variation 969
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785213712"
variation 970
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785213861"
variation 971
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1785214034"
variation 975
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:763128187"
variation 978
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1041601154"
variation 980
/gene="CLDN20"
/replace=""
/replace="g"
/db_xref="dbSNP:1313034646"
variation 985
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:764654841"
variation 986
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1460511661"
variation 987
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:924354882"
variation 989
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1343547473"
variation 992..1018
/gene="CLDN20"
/replace="cacacagctcgagaacaattccacaca"
/replace="cacacagctcgagaacaattccacacagctcgagaacaattccacaca
"
/db_xref="dbSNP:1320796818"
variation 993
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:752133156"
variation 997
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:757889355"
variation 999
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1158645546"
variation 1001
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:149570827"
variation 1002
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:368500699"
variation 1003
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:754645889"
variation 1004
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1380225228"
variation 1014
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1785217285"
variation 1016
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1480045439"
variation 1017
/gene="CLDN20"
/replace=""
/replace="c"
/db_xref="dbSNP:1785217880"
variation 1017
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1051944943"
variation 1022
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1291404768"
variation 1023
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:6941874"
variation 1024
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:575498275"
variation 1025
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1785218594"
variation 1028
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:267600871"
variation 1029
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:267600872"
variation 1035
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1785219294"
variation 1037
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785219486"
variation 1038
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:752139076"
variation 1040..1058
/gene="CLDN20"
/replace="a"
/replace="aataactgagtaatgcata"
/db_xref="dbSNP:779543024"
variation 1045
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1259692302"
variation 1050
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:2114715297"
variation 1051
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1785220321"
variation 1053
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:536392718"
variation 1055
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:777641660"
variation 1057
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:746915456"
variation 1058
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1230214184"
variation 1059
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:147319822"
variation 1061
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1785221750"
variation 1063
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:781024183"
variation 1064
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785222225"
variation 1069
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:745659363"
variation 1073
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:769992530"
variation 1074..1076
/gene="CLDN20"
/replace="gg"
/replace="ggg"
/db_xref="dbSNP:1785223189"
variation 1074
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:775885979"
variation 1075
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:375362798"
variation 1084
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:768831945"
variation 1085
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1296877519"
variation 1086
/gene="CLDN20"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:898772969"
variation 1087
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1397611754"
variation 1093
/gene="CLDN20"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:995616335"
variation 1097..1098
/gene="CLDN20"
/replace="tt"
/replace="ttt"
/db_xref="dbSNP:1025806297"
variation 1098
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1416479942"
variation 1099..1107
/gene="CLDN20"
/replace="aaaaaaaa"
/replace="aaaaaaaaa"
/replace="aaaaaaaaaa"
/db_xref="dbSNP:200044619"
variation 1099
/gene="CLDN20"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:750017875"
variation 1106
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:572880913"
variation 1110
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1785226007"
variation 1112
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:999879999"
variation 1125
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:539807887"
variation 1127
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:777017375"
variation 1128
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1785226649"
variation 1133
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1431798167"
variation 1135
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1785227095"
variation 1137
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1785227308"
variation 1139
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1785227500"
variation 1141
/gene="CLDN20"
/replace="c"
/replace="g"
/db_xref="dbSNP:1034461303"
variation 1142
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:1785227983"
variation 1148
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:958709274"
variation 1149
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785228469"
variation 1154
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1176387237"
variation 1157..1159
/gene="CLDN20"
/replace="ttt"
/replace="tttt"
/db_xref="dbSNP:1240864733"
variation 1159
/gene="CLDN20"
/replace="a"
/replace="t"
/db_xref="dbSNP:1202687403"
variation 1160..1165
/gene="CLDN20"
/replace="aac"
/replace="aacaac"
/db_xref="dbSNP:1344742749"
variation 1161
/gene="CLDN20"
/replace="a"
/replace="c"
/db_xref="dbSNP:1252311347"
variation 1168
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785229884"
variation 1171
/gene="CLDN20"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:6925410"
variation 1173
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785230686"
variation 1182
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1296913698"
regulatory 1187..1192
/regulatory_class="polyA_signal_sequence"
/gene="CLDN20"
/note="hexamer: AATAAA"
variation 1189
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785230990"
variation 1190
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1785231127"
variation 1195
/gene="CLDN20"
/replace="g"
/replace="t"
/db_xref="dbSNP:77018521"
variation 1196
/gene="CLDN20"
/replace="a"
/replace="g"
/db_xref="dbSNP:1385144316"
variation 1197
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:2114715784"
variation 1200
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1024222196"
variation 1202
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:951203000"
variation 1203..1206
/gene="CLDN20"
/replace="acaa"
/replace="acaacaa"
/db_xref="dbSNP:1452265170"
variation 1204
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1168571692"
variation 1207
/gene="CLDN20"
/replace="c"
/replace="t"
/db_xref="dbSNP:1785232021"
polyA_site 1209
/gene="CLDN20"
/note="major polyA site"
ORIGIN
aaagttcgaagtgggatgatcacgggcagacctgggtggttgggaacaggaagcatatggcatcttgcaggctataggcaccacaaaatggaacgcaggaggacaggggcttgggagagccacttcactgtcgggtaaaacaacggagcaagatgagtgcctccggatgcttggtttccccaccctccagtgtctgcttgctcttcaagtacctccaccaagctaatgacagtccactttaggacatcacgggcctcgaggttacaactttcccaggctttgttatttggttctctactgcacagaaatagatagaattctgacagccatcattgttaaacatcaggattttctaagaggacagacttaacagtaacatcatggcctcagcaggactccagctccttgctttcatcctggccttatctggggtctctggagtgctcacagccactctgctgcccaactggaaggtgaatgtggatgtggactccaacatcataacagccattgtacagctgcacgggctctggatggactgtacgtggtacagcactgggatgttcagctgtgccctgaaacactccattctgtccctccccatccacgtgcaggctgcgagagccaccatggtcctggcgtgtgttctgtctgctttggggatctgcacttccacagtaggaatgaaatgtactcgcttaggaggggacagagaaaccaagagccatgcttcctttgctggaggagtctgtttcatgtctgcaggaatctctagtttaatctcgacagtgtggtacacaaaggagatcatagcaaactttctggatctgacagttccagaaagcaacaaacatgaacctggaggagctatctatatcggattcatttctgcaatgctgttgtttatctctggcatgattttctgcacctcctgtataaaaaggaatccagaagctagactcgacccacccacacagcagcctatctctaacacacagctcgagaacaattccacacacaatctgaaggattatgtgtaaataactgagtaatgcatatgaaatggaacttttgggtgccaaatgggacttttagattaaaaaaaaatcagaattatgcttaactttccctacaaagaaagtagaatgtaaaatactttaacaactacaaagtagtttaaaatgccaataaaactatcatatacaatta
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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