2024-11-01 14:35:42, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_021471576 1205 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio putative claudin-24 (LOC110438642), mRNA. ACCESSION XM_021471576 VERSION XM_021471576.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018394568.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1205 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="5" /map="unlocalized" gene 1..1205 /gene="LOC110438642" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:110438642" CDS 293..955 /gene="LOC110438642" /codon_start=1 /product="putative claudin-24" /protein_id="XP_021327251.1" /db_xref="GeneID:110438642" /translation="
MVLFTTKFVQRTSLFVSFGGLVTTFVTTFLPLWKTMNSDLNEMENWYEGLWHMCIYTEEVGIHCKAFDSFLALPPDTFAGRVLMCISIATGILGVAAAFFGLRGVEIGASRERMKRNLLILGGVFVVVSGVTTLAAVSFMAYVMVVKFWDDDRPEVMPGWEYGEAMFSAWFAGLLLVVGGSFLFVAVCMGDHEVKLQTEMIARCQEQRPRSLHYRKTEII"
misc_feature 332..841 /gene="LOC110438642" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN
ctaaacagatttctgtttcccctcgatttaaaaaaagtccaaccacactctgttcaggcttcgtacgtccagacttaaaactagacgtatcgtatttcctctcaaaaaagcagttattgtcctcggcgaagatattcatcagtttgaaaaacagtcctgccgttgtgaagggctccaggattatccagcaggaacaggtgggtttttattaaagcaaaggaggagccagacgaaaaccagaagagctgaaaatctcagatggacagacagacaaaatcagacgagaggtaatatggtgctgttcaccaccaagtttgtacagaggacttcgctctttgtgtccttcggaggtttggtcacaacgttcgtcacaaccttcttgcctctatggaagacgatgaactccgatttgaatgaaatggagaactggtacgagggtctctggcacatgtgtatctacacggaggaagttggcatccattgcaaagcctttgattctttcttagctcttccgccggacactttcgctggccgggttctcatgtgcatttccatcgccactggaattctcggtgtggcggctgcttttttcggactccgcggagttgagattggagccagtcgagagaggatgaagaggaatctgctgatcctcgggggagtttttgtagttgtgtctggagtcacgactcttgcggctgtttcatttatggcgtatgttatggttgtgaaattctgggatgatgatcgtcctgaagtcatgcccggatgggagtatggagaagccatgttttctgcctggtttgctggacttctgttagttgtcggagggagttttttgtttgttgcagtctgcatgggcgatcatgaagtgaagctgcaaactgaaatgattgcacgctgtcaagaacagcggccgagatctctgcattaccgaaagacggaaatcatatagctttgatttttgtctgaagatcggaaaaaaatcgaagcttaactaaacaaagttgctgaacttttgaaatattgaacttgttttaatcggaactataatatcttgtggtgattttgttttataatccgctctcaagtaaattgaaagaaagttgaagtcaacatctacatttttttttctcttctttttcaaatattttccaaacgatgtttaacaaagcaaggaaattttcacagtatgcctgataacc
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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