LOCUS       XM_009305884            1693 bp    mRNA    linear   VRT 15-JUN-2017
DEFINITION  PREDICTED: Danio rerio engrailed homeobox 1b (en1b), transcript
            variant X1, mRNA.
ACCESSION   XM_009305884
VERSION     XM_009305884.3
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_007112.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 15, 2017 this sequence version replaced XM_009305884.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Danio rerio Annotation Release 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="1"
     gene            1..1693
                     /gene="en1b"
                     /gene_synonym="eng4; wu:fc84e11; zgc:113499"
                     /note="engrailed homeobox 1b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 122 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:541371"
                     /db_xref="ZFIN:ZDB-GENE-980526-6"
     CDS             380..1216
                     /gene="en1b"
                     /gene_synonym="eng4; wu:fc84e11; zgc:113499"
                     /codon_start=1
                     /product="homeobox protein engrailed-1 isoform X1"
                     /protein_id="XP_009304159.1"
                     /db_xref="GeneID:541371"
                     /db_xref="ZFIN:ZDB-GENE-980526-6"
                     /translation="

MDEQKDQNSRDSTESESVSLSPNIPSPPILPHQAAQQAHRTTNFFIDNILRPDFGCKKDPGSRDRAQTSGRENVNPMVIRPSHNSSLCQDSNCSSDSTSSSSSSSPSSKQSSVKHFEGNGSTAARNGENTPSIMMVNANGGTPPAKESQPLLWPAWVYCTRYSDRPSSVSTLGPRTRKLKKKKSEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELNLNESQIKIWFQNKRAKIKKASGYKNGLALQLMAQGLYNHSTTTVQDEKEDSE"

     misc_feature    947..1114
                     /gene="en1b"
                     /gene_synonym="eng4; wu:fc84e11; zgc:113499"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
     misc_feature    1115..1207
                     /gene="en1b"
                     /gene_synonym="eng4; wu:fc84e11; zgc:113499"
                     /note="Engrailed homeobox C-terminal signature domain;
                     Region: Engrail_1_C_sig; pfam10525"
                     /db_xref="CDD:431338"
ORIGIN      

gtgacaccaaggatgttggtaccccattggtccatcgcacgtgtgtctctctcacgtgcttccggttaaggaaaaaaagtatgtgaggggcacagtgattttagaaagagtttgttaagcgcgagctgtcacacggggcagcgagtcagggactgcggagcatcgcgcgatgtattgtctgacatgaataacgggtgtgttttgacacttgaaacgccttgatcgcggaaagcattccgatgctatgacagtcgcttcttttaaggtatttcgtatacctttaatttaacactatagactgcattcttgtttgttgttatccggatactgttcattgcaacaagtggaattttggtgtgcagaccacgatccagctgtcatggacgagcaaaaggatcaaaatagtcgtgattcgactgagtctgagagcgtctcgctctcacccaatataccatctcctccgattttacctcaccaggctgcgcagcaagcccacagaaccacgaactttttcatcgacaatattttaaggccagatttcggctgcaagaaagatcctgggagtagggatcgggcgcaaacgtcgggtagggagaatgttaacccaatggtaataaggccgtcgcataatagcagtctttgccaggattcaaactgcagtagtgacagcacttcttcgtcctcgtcgtcttcgccatcctcaaagcagtcctcggtaaagcatttcgaaggaaatggatctaccgcagcaaggaacggggagaatacgccgtcgataatgatggtgaacgccaacgggggaactccgccagctaaagaatcacagcctttactatggcctgcgtgggtgtactgcaccaggtactcggacagaccttcatctgtttctacactaggcccaaggacacgaaaattgaaaaagaagaaaagcgaaaaggaagacaagcgaccgagaactgctttcacggctgaacagctgcagagacttaaagccgagtttcaggcgaatcggtacattacggagcagcgaagacagtctctggcccaggaactcaacctcaatgagtcgcaaataaaaatctggttccagaataagagggccaaaatcaaaaaggcttctggctataagaacggccttgctcttcagctcatggctcaaggactctacaaccattccacaaccacagttcaagacgaaaaagaagatagcgaataaaaatggcccggctcatgtgttttaaaaaggtcatggacgctgaccccgacagaagtgatttttcatatttttatgaatcaaatgaaaaggaaatgtcttcgaattctgcgaaacgaagatgcgatatttaaacaaatttctgtttatcaaacactatatggacatgcatctaaatacgaacactatgaaaatttatatatagccaaaactgtaagatgtgtatatttaattccaggtaaggggatgtctatattgctccttacttgctgaatatttctaacgtttcttctcctttcccaatgtggttgctcaccgttccagtaggcctaagtgtcaggcttgttagtttttgtgatagccctgtctcttaaatcccttatctcacagttcttcaaatgcgtgactgaaccaacgcttcaagccaaagattttaatatgttcagattatgttgtctgaaataaaaaggtagaatgtgc

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