LOCUS       NM_001386538            1052 bp    mRNA    linear   VRT 28-SEP-2020
DEFINITION  Danio rerio si:ch211-40k21.5 (si:ch211-40k21.5), transcript variant
            2, mRNA.
ACCESSION   NM_001386538 XM_002666695
VERSION     NM_001386538.1
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FP089511.13.
            
            On Aug 29, 2020 this sequence version replaced XM_002666695.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EH540845.1, GFIL01017135.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2168447, SAMEA4476810
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-230               FP089511.13        102210-102439
            231-342             FP089511.13        106840-106951
            343-468             FP089511.13        107048-107173
            469-615             FP089511.13        108791-108937
            616-1052            FP089511.13        111847-112283
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="24"
                     /map="24"
     gene            1..1052
                     /gene="si:ch211-40k21.5"
                     /note="si:ch211-40k21.5"
                     /db_xref="GeneID:100332117"
                     /db_xref="ZFIN:ZDB-GENE-131121-368"
     exon            1..230
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..897
                     /gene="si:ch211-40k21.5"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /codon_start=1
                     /product="uncharacterized protein LOC100332117 isoform 2"
                     /protein_id="NP_001373467.1"
                     /db_xref="GeneID:100332117"
                     /db_xref="ZFIN:ZDB-GENE-131121-368"
                     /translation="

MEAAEQQGSESETEYPKKPRHPAKIKNDQRYNKGRINIGDEIKRWKQLKREKGFKSNIELATYLLDRAFSELSEDRSSISSISPISIPPRRQPQKSIRPALQSEATWTDSLSSDQLSDSETLPGPDSKSAKVEVLEFGYEHPPYQTIKQEEPEQQLEDESGVDIMIASTAQSYGFVPHCSSSTDEENEMQWDEIKDELAETAQRLEERLEAMRSLSVRAPKPMSVTKEKDKEVKWTNKSSLKTLFRTCHQCGESVLEFKTLTSGSLSWIQWECSKGHLMCLFHNYNTT"

     exon            231..342
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
     exon            343..468
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
     exon            469..615
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
     exon            616..1052
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

aaaccccgcatctttcaattcatttcagtcatggaagctgccgaacaacaggggtcagagtcagagactgaatatcctaaaaagcctcggcatcccgccaaaataaaaaatgatcaacggtataataaaggccgtataaatattggagatgaaataaagaggtggaaacagctcaaaagagagaaaggcttcaaatcaaacatagagttggccacctatctccttgacagggcatttagtgaactttcagaagaccgatccagcatttcttcaatctctccaatctccattcctcccagaagacaacctcagaaatcaataaggcctgcactgcaatctgaggcaacatggactgattcactcagttcggaccagctgtcagactctgaaactctgcctggtcctgattccaaatctgcaaaggttgaagttctcgagttcggctacgagcatcctccatatcagacaattaagcaagaagagcctgaacaacaattggaggatgaatctggtgtggatatcatgattgcttctactgcacagtcgtatggttttgttcctcattgttcatcatctacagatgaagaaaacgaaatgcaatgggatgaaataaaggatgaattagcggagactgcacagcgactggaagagcgcttggaagcaatgaggtcattgtcagtccgcgcaccaaaacccatgtcagtgaccaaagaaaaagataaggaagtaaaatggaccaacaaatccagtttgaagacgctattcaggacctgccatcagtgtggagagtcggtactggagtttaagacgttaacatcagggagcctcagctggattcagtgggaatgttcaaaaggacacctcatgtgcctcttccacaactataacaccacgtaacactcaatccagaaagaatcaagcaactgcacactatgtatataggtttagcacattgtgaataacggatgatcagttttactttgcaataaatgatctctttattggtgtaagggaggtttgggatgttctataattaaaaatctttcagttca

//