LOCUS       NM_001011659            4084 bp    mRNA    linear   INV 04-MAY-2019
DEFINITION  Ciona intestinalis kinesin-like protein 2 (klp2), mRNA.
ACCESSION   NM_001011659
VERSION     NM_001011659.1
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
REFERENCE   1  (bases 1 to 4084)
  AUTHORS   Still IH, Vettaikkorumakankauv AK, DiMatteo A and Liang P.
  TITLE     Structure-function evolution of the transforming acidic coiled coil
            genes revealed by analysis of phylogenetically diverse organisms
  JOURNAL   BMC Evol. Biol. 4, 16 (2004)
   PUBMED   15207008
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. This record has been curated by NCBI staff in
            collaboration with Ivan Still. The reference sequence was derived
            from EAAA01001736.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed/partial sample support SAMD00013799,
                              SAMD00028078 [ECO:0000350]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-262               EAAA01001736.1     21704-21965         c
            263-339             EAAA01001736.1     21426-21502         c
            340-481             EAAA01001736.1     20707-20848         c
            482-664             EAAA01001736.1     20123-20305         c
            665-776             EAAA01001736.1     19493-19604         c
            777-1000            EAAA01001736.1     18891-19114         c
            1001-1168           EAAA01001736.1     18035-18202         c
            1169-1238           EAAA01001736.1     17218-17287         c
            1239-1389           EAAA01001736.1     16774-16924         c
            1390-1504           EAAA01001736.1     15654-15768         c
            1505-1609           EAAA01001736.1     15235-15339         c
            1610-1685           EAAA01001736.1     14417-14492         c
            1686-1797           EAAA01001736.1     13763-13874         c
            1798-1972           EAAA01001736.1     12987-13161         c
            1973-2081           EAAA01001736.1     12456-12564         c
            2082-2275           EAAA01001736.1     12023-12216         c
            2276-2381           EAAA01001736.1     11466-11571         c
            2382-2488           EAAA01001736.1     11020-11126         c
            2489-2707           EAAA01001736.1     10221-10439         c
            2708-2917           EAAA01001736.1     9390-9599           c
            2918-3046           EAAA01001736.1     8912-9040           c
            3047-3145           EAAA01001736.1     8499-8597           c
            3146-3355           EAAA01001736.1     7708-7917           c
            3356-3496           EAAA01001736.1     7224-7364           c
            3497-3615           EAAA01001736.1     6877-6995           c
            3616-3688           EAAA01001736.1     6202-6274           c
            3689-3820           EAAA01001736.1     5054-5185           c
            3821-4084           EAAA01001736.1     4637-4900           c
FEATURES             Location/Qualifiers
     source          1..4084
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
                     /chromosome="3"
                     /map="3"
     gene            1..4084
                     /gene="klp2"
                     /note="kinesin-like protein 2"
                     /db_xref="GeneID:497053"
     exon            1..262
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    38..40
                     /gene="klp2"
                     /note="upstream in-frame stop codon"
     CDS             65..3943
                     /gene="klp2"
                     /codon_start=1
                     /product="kinesin-like protein 2"
                     /protein_id="NP_001011659.1"
                     /db_xref="GeneID:497053"
                     /translation="

MGDTEAHGNSSSDSIRVILRIRPPANNSGSLVCLKVLPDSEIVLTHGKCTSKDFKFDHVLDQDASQESVFHAVGKRIVEGCVEGYNGTIFAYGQTGSGKTFTMLGPSEDFDSHGVNKMNGVIPRSLEYLFQLINQKQEMHGEKVEFLCKCSFFEIYQEHIYDLLDTGAVSPLQLRESLSRGVFVDHIIETVVASVSEAFMVLKSGWNNRHVASTSMNRESSRSHAVFTLSIETKDKTGEVTKVRRSLLNMVDLAGSERQRDTGTTGQRLKEAGNINKSLSVLGNVMMSLVDIENGKQRHVPYRDSKLTFLLKDSVGGNARTCLIANIHPNSNFYGETITTLQFAQRAKMIKNKARINEDMQGDIVALQSEIKRLKIMLLRSDPKVTPTSLPEKLLERKYQDLFFDAMLLWKQDIISIEAMKLQLDAKEALVKRGNKALQSSRMIIKFRDLTITRMKGASTLLKDELVQMLNKELEALREQVFNPSEDSLQSSKVKEMELTIQQMQAQEDYRTYFKISEDKREKLLKEFDLAMKERSSEIQDSSGNLRSAAEFSKEVTRLNNEIRKLNETNNNGKHALQKKIEELEAELAGSRKAREDLEKMLMAVQEGSRIKIKRLNSVHDSAIRTITTPLKNQDQNRKRSSSSDRPPSARKMLKSNDGDAVFNLFNGSFSKKETNFLDETLDDRDEFGSTALKVELEWEREDKIKVEKQVQELERECGRLREQLTVIEKKFSYSEETVTTLKSDLTIRDENLKTKVSELSKEFDQLSQDNKLKEEEIFDLRIMLNSADKQLREYKQNLSETKGLSKEEFTKLVTTNSQLMIEMEGKITEAESLQHNVEKLNEQLTTTTEELDYANERLREASALVRLKQELCDKSDLQIKTLKEQMQQLNALHEGNNQEKEETFKQLQEENFSLHSKLASAVEQNAECQKSITEFKSDLELLEKAARYDKDNITSLLKEVSKLKGNLEQETTTCVGLQDELTSCRNQLNDFTNEMNQNCEKNELLETKLKQVSAELESSTLKHQFELENLQDDLGSLTDINTALEEDLRKKDEVLTSNVMLHEEEQRKIRREVEELQEQVRDLKKKLEVAIQDQENRGLDEALRLRLEGELDERNKQFNEMSENQDEIMKLYNSTRERCSAFEDQIRFEKERLQATEHRGLLLETELSTVRNVNSAFNEDISRLHQENQTLNEEVGTLKDSEVSLTEKLERLTAENAKLHTEAAVLAGHSNHQQKIHYLTRLKDDLLTVTNEKNNLQEQCAKLNEELRKYKHNSLLQVRRSHSPSQKLCTP"

     misc_feature    101..1141
                     /gene="klp2"
                     /note="Myosin and Kinesin motor domain; Region:
                     Motor_domain; cl22853"
                     /db_xref="CDD:473979"
     misc_feature    order(128..133,341..364,698..703,818..835)
                     /gene="klp2"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:276824"
     misc_feature    <1310..3835
                     /gene="klp2"
                     /note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
                     cl47134"
                     /db_xref="CDD:481474"
     misc_feature    <2180..3430
                     /gene="klp2"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
     exon            263..339
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            340..481
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            482..664
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            665..776
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            777..1000
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1001..1168
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1169..1238
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1239..1389
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1390..1504
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1505..1609
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1610..1685
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1686..1797
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1798..1972
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            1973..2081
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            2082..2275
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            2276..2381
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            2382..2488
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            2489..2707
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            2708..2917
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            2918..3046
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            3047..3145
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            3146..3355
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            3356..3496
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            3497..3615
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            3616..3688
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            3689..3820
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
     exon            3821..4084
                     /gene="klp2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

aaatgttttattgtgggcttgtggcgatcattatttatagaaacgacaagcgatagtttttaaaatgggagacacagaagcacatggtaattctagtagcgattccattcgagttattcttcgcattcgaccaccagcaaacaactctggcagtctagtttgcctaaaagttttaccagattccgaaatcgtgttaacgcacgggaaatgcacttcgaaagattttaaatttgatcatgtacttgaccaagacgcttctcaggaatcagtgttccatgcagttggaaagagaatcgtggaaggctgtgttgagggttataatggaactatatttgcttatggtcaaacaggatcaggcaaaacgtttaccatgcttggaccaagtgaagattttgactcgcatggtgttaacaaaatgaacggagtcataccaagatccctggaatatttatttcaacttattaaccagaaacaagaaatgcacggagaaaaagtcgagttcctatgcaaatgttctttctttgaaatataccaagaacatatttatgatttgcttgacacgggtgctgtgtcacctttacaactccgtgaatctttgagcagaggagtctttgttgaccatataattgaaacagttgttgcttctgtatcagaagcattcatggtcctcaaatctggttggaacaatcgtcatgtagcttcaacttccatgaaccgtgaaagttcacgaagtcacgcagtgtttacattgtcgattgaaaccaaagacaaaacaggtgaagttacaaaagtacgaagaagtttacttaatatggtggatcttgctggttctgaacgacagagagatactgggactactgggcaaaggttaaaagaagcagggaacattaacaagtctcttagtgtgcttggaaacgtcatgatgtcacttgttgatattgagaacggaaaacaacgtcatgtcccatacagagattcaaaactcacattcttgttaaaagattccgttggtggaaatgcacgcacatgtcttatcgcaaacattcatccaaattcaaacttctacggcgaaacgatcaccactctacagtttgctcagcgtgcaaagatgataaagaacaaagcacgtataaatgaagacatgcagggggatattgtggctctgcagagtgaaataaagaggttgaagataatgcttttaagatcggatcccaaggtcacccctacttcactaccagaaaaacttttggaaagaaaataccaggatttattctttgacgcgatgttactttggaaacaggatattatttcaattgaagcaatgaagttacaactagatgcaaaggaagcactggttaaaagggggaacaaagctttacagtcatcaagaatgatcataaagtttcgtgatttaaccataactcgcatgaaaggagcgtctactttattgaaggatgaattggtgcagatgcttaacaaagaacttgaagcactgcgtgaacaggttttcaacccaagtgaggattcacttcaatcatccaaagtgaaagaaatggaactaactattcaacaaatgcaagcacaggaagattacaggacctattttaagatatctgaggacaaaagagaaaaattattgaaagaatttgatctagccatgaaagagaggtcatcagaaatacaagattcttcaggcaacttaagatctgcagctgagttcagtaaagaagtcacaaggttaaataacgaaataagaaaattgaatgaaactaacaacaatggaaaacatgccttgcagaaaaagattgaagagttagaagctgagcttgcgggatcgagaaaagcaagggaggatcttgagaagatgttgatggctgttcaagagggatcaaggattaaaattaaacgtcttaactctgtccatgactctgctattaggaccatcacaactccacttaaaaatcaggaccagaatcgtaaacgctcaagttccagtgataggccacctagtgctcgtaaaatgttgaaatcaaatgacggcgatgctgtgttcaacttgtttaatggaagcttttcaaaaaaagagacaaatttcctggacgagacgctcgacgaccgagacgagttcggatcaactgcgctaaaagttgagcttgaatgggaaagggaggataaaataaaggtggaaaagcaagtccaggagcttgagagggagtgtggaaggctgagggaacagctaaccgtgattgagaagaaattttcctattcagaagagacagtgacaactttgaaatctgacctcacaataagagacgagaatcttaaaactaaagttagcgaactttcgaaggagtttgatcaactttcccaagataataaattgaaagaagaagaaatatttgatcttcgtattatgttgaactctgcagataaacaacttcgtgaatataaacaaaacctttctgaaacaaaaggtttatctaaagaggaattcacaaaactagtgaccaccaacagccagctaatgatagaaatggaaggaaaaatcactgaagctgaaagtttgcagcataatgtcgagaagctgaatgaacaactgactacaacgactgaggagctcgactatgcaaatgagaggctccgtgaagcttctgcacttgttaggttgaagcaggaactttgcgacaagtcagatcttcaaattaaaaccctcaaagaacagatgcaacagcttaatgctttgcatgagggaaacaaccaagagaaagaagaaacatttaaacaactacaagaggaaaactttagtcttcactctaaacttgcatctgctgttgaacagaatgcagagtgtcaaaaatcgataaccgaattcaaaagtgatttggaactgcttgaaaaggctgcccgttatgataaggataacatcacctcattgctgaaagaagtatcaaaacttaaaggcaaccttgaacaagaaaccaccacatgtgttggcctacaagacgaactaacgagttgtagaaatcaactgaacgattttactaatgaaatgaatcaaaattgtgaaaagaatgaattacttgaaacaaaactgaaacaagtgtcagcagaactggaaagctcaactttgaaacatcagtttgagttggagaacctccaggatgatcttgggagcctcacggacataaacaccgctcttgaagaggacctccggaagaaagatgaagtacttacctcaaacgtgatgttgcatgaagaggagcaaaggaagataaggagggaggtggaggagctccaggagcaagtgagagatctgaagaagaaactggaggttgcgatccaggatcaggagaatcgtgggttggatgaagcattgagacttcgtcttgaaggagaacttgatgaaagaaacaaacagttcaatgagatgagcgaaaaccaagatgaaataatgaagttgtataactcgactagagaaaggtgttctgcatttgaggatcaaattagattcgaaaaagaacgactccaagctacagaacacagaggtcttttacttgaaacagaattatcaaccgtgcgtaatgtgaactctgcctttaatgaggatatttcaagattacaccaggaaaatcagaccttaaatgaagaggttggaacattaaaagattctgaggtttctctaacagagaagcttgagcgtcttacagcagaaaatgcaaagttacacaccgaagctgcggtgctagcaggccactcgaaccaccagcaaaaaatccattatttgacccgactcaaggacgatcttttaacggtgactaatgaaaagaacaacttacaagaacagtgtgcgaaactcaacgaggaactcaggaaatacaaacacaatagccttttacaagtcaggagatctcattccccaagccagaagctgtgtactccataacattactcctattgctgttaatttcccggtaggacgaaatcgagacgggctgcatccgatcgcttatcactgctgctgctgctattgtatcgtgttttggaaaagtttataacgcgttgtgcttgaaaattgttagtccgt

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